Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2509
Gene name
Locationscaffold_207:22320..23673
Strand+
Gene length (bp)1353
Transcript length (bp)1353
Coding sequence length (bp)1350
Protein length (aa) 450

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 201 223 22
3 227 246 19
4 311 333 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2509
MTDQNCPPGNPSPTIVFGALGAILGYIGAESGTTACFERQLWPQRSYSSFNLSSALGVALFTPMGGPLFKMACHT
LDGIFQNGLFFGSHEGHMLGTVFFPQRHWIYTIFRSGKDGRLDAASEPARNCLWAQALSHMPMPPISSLFPPQPS
KHIEGGQQEKPKIRAEVAVHHLRVSLATPEDKSSSLPLVAEDSTTLKLPTLLAIVTSELTSLLTAIYVLAYFGSS
WAFLWMAPLVIRLISAAFALYRDPLIDPRLRSDADNAEACFKVHTDQPNGHFMLFTGPRLLVQQFFEHYGHPRRH
RVREMVQVTTLIFFYVSFPLQLLASLVWMPLQVQYVWLCYQMYAVVATHITRYSRVGLVDTAHGIAKAFTEPEHQ
QDSPYSHRACTILFGSDRQSPSTLVVSLAVTYHSRYMEGKKAMESLLKDFSTLSAQEAESSRVERQDTEVCKSTS
Coding >Ophio5|2509
ATGACGGACCAGAACTGCCCGCCCGGCAACCCATCTCCGACCATCGTCTTCGGGGCTCTCGGTGCCATCCTCGGC
TACATCGGCGCCGAATCAGGAACAACGGCCTGCTTCGAACGCCAGCTCTGGCCGCAAAGAAGCTATTCCAGCTTC
AACTTGTCGTCTGCCCTTGGCGTCGCGCTGTTCACGCCCATGGGCGGTCCATTGTTCAAAATGGCCTGCCACACG
CTGGATGGCATCTTCCAAAACGGGCTCTTCTTCGGCTCTCATGAGGGTCACATGCTGGGCACCGTCTTCTTCCCG
CAGCGGCACTGGATTTACACCATATTTAGGAGTGGCAAAGACGGACGGCTGGATGCCGCATCTGAGCCCGCTCGG
AACTGTCTCTGGGCACAGGCTCTCTCCCATATGCCCATGCCGCCCATCAGCTCTCTGTTTCCACCTCAGCCGAGT
AAGCACATCGAGGGCGGCCAGCAAGAGAAGCCTAAAATTCGAGCAGAGGTCGCTGTCCATCACCTTCGTGTGTCC
CTGGCGACGCCCGAGGACAAATCTTCGAGTCTGCCCCTTGTTGCTGAGGATTCGACCACACTAAAATTGCCCACC
TTGTTGGCAATCGTCACTTCGGAGTTGACTAGCTTGTTGACGGCCATCTACGTGTTGGCATATTTCGGATCCTCC
TGGGCCTTTCTTTGGATGGCGCCTTTGGTTATTCGGCTGATCAGCGCGGCTTTCGCTCTCTACAGAGATCCGCTC
ATAGATCCTCGCCTACGTTCCGATGCAGACAATGCCGAGGCGTGCTTCAAAGTCCACACAGACCAGCCAAACGGC
CACTTCATGCTCTTCACTGGACCCCGTCTGCTCGTACAGCAATTCTTCGAACATTACGGGCACCCTAGGCGACAC
CGCGTGCGGGAGATGGTGCAAGTAACGACGTTGATCTTCTTTTACGTCTCGTTCCCACTACAGCTTCTAGCATCC
CTTGTATGGATGCCGCTGCAGGTGCAATACGTATGGCTTTGCTATCAAATGTACGCCGTCGTGGCAACGCACATT
ACTCGATACAGCCGCGTTGGCCTCGTCGACACCGCGCATGGCATAGCGAAGGCTTTCACGGAGCCGGAGCATCAG
CAAGATTCTCCTTACTCCCATAGGGCATGCACTATTCTTTTTGGGAGTGACAGGCAATCACCTTCGACCCTCGTC
GTTTCTCTTGCCGTCACCTATCACAGTCGCTACATGGAGGGAAAGAAGGCCATGGAGAGTCTACTGAAGGACTTT
TCGACGCTCTCTGCTCAGGAGGCAGAGTCAAGCCGAGTCGAGAGACAGGATACGGAGGTATGCAAGTCCACGTCG
Transcript >Ophio5|2509
ATGACGGACCAGAACTGCCCGCCCGGCAACCCATCTCCGACCATCGTCTTCGGGGCTCTCGGTGCCATCCTCGGC
TACATCGGCGCCGAATCAGGAACAACGGCCTGCTTCGAACGCCAGCTCTGGCCGCAAAGAAGCTATTCCAGCTTC
AACTTGTCGTCTGCCCTTGGCGTCGCGCTGTTCACGCCCATGGGCGGTCCATTGTTCAAAATGGCCTGCCACACG
CTGGATGGCATCTTCCAAAACGGGCTCTTCTTCGGCTCTCATGAGGGTCACATGCTGGGCACCGTCTTCTTCCCG
CAGCGGCACTGGATTTACACCATATTTAGGAGTGGCAAAGACGGACGGCTGGATGCCGCATCTGAGCCCGCTCGG
AACTGTCTCTGGGCACAGGCTCTCTCCCATATGCCCATGCCGCCCATCAGCTCTCTGTTTCCACCTCAGCCGAGT
AAGCACATCGAGGGCGGCCAGCAAGAGAAGCCTAAAATTCGAGCAGAGGTCGCTGTCCATCACCTTCGTGTGTCC
CTGGCGACGCCCGAGGACAAATCTTCGAGTCTGCCCCTTGTTGCTGAGGATTCGACCACACTAAAATTGCCCACC
TTGTTGGCAATCGTCACTTCGGAGTTGACTAGCTTGTTGACGGCCATCTACGTGTTGGCATATTTCGGATCCTCC
TGGGCCTTTCTTTGGATGGCGCCTTTGGTTATTCGGCTGATCAGCGCGGCTTTCGCTCTCTACAGAGATCCGCTC
ATAGATCCTCGCCTACGTTCCGATGCAGACAATGCCGAGGCGTGCTTCAAAGTCCACACAGACCAGCCAAACGGC
CACTTCATGCTCTTCACTGGACCCCGTCTGCTCGTACAGCAATTCTTCGAACATTACGGGCACCCTAGGCGACAC
CGCGTGCGGGAGATGGTGCAAGTAACGACGTTGATCTTCTTTTACGTCTCGTTCCCACTACAGCTTCTAGCATCC
CTTGTATGGATGCCGCTGCAGGTGCAATACGTATGGCTTTGCTATCAAATGTACGCCGTCGTGGCAACGCACATT
ACTCGATACAGCCGCGTTGGCCTCGTCGACACCGCGCATGGCATAGCGAAGGCTTTCACGGAGCCGGAGCATCAG
CAAGATTCTCCTTACTCCCATAGGGCATGCACTATTCTTTTTGGGAGTGACAGGCAATCACCTTCGACCCTCGTC
GTTTCTCTTGCCGTCACCTATCACAGTCGCTACATGGAGGGAAAGAAGGCCATGGAGAGTCTACTGAAGGACTTT
TCGACGCTCTCTGCTCAGGAGGCAGAGTCAAGCCGAGTCGAGAGACAGGATACGGAGGTATGCAAGTCCACGTCG
TAA
Gene >Ophio5|2509
ATGACGGACCAGAACTGCCCGCCCGGCAACCCATCTCCGACCATCGTCTTCGGGGCTCTCGGTGCCATCCTCGGC
TACATCGGCGCCGAATCAGGAACAACGGCCTGCTTCGAACGCCAGCTCTGGCCGCAAAGAAGCTATTCCAGCTTC
AACTTGTCGTCTGCCCTTGGCGTCGCGCTGTTCACGCCCATGGGCGGTCCATTGTTCAAAATGGCCTGCCACACG
CTGGATGGCATCTTCCAAAACGGGCTCTTCTTCGGCTCTCATGAGGGTCACATGCTGGGCACCGTCTTCTTCCCG
CAGCGGCACTGGATTTACACCATATTTAGGAGTGGCAAAGACGGACGGCTGGATGCCGCATCTGAGCCCGCTCGG
AACTGTCTCTGGGCACAGGCTCTCTCCCATATGCCCATGCCGCCCATCAGCTCTCTGTTTCCACCTCAGCCGAGT
AAGCACATCGAGGGCGGCCAGCAAGAGAAGCCTAAAATTCGAGCAGAGGTCGCTGTCCATCACCTTCGTGTGTCC
CTGGCGACGCCCGAGGACAAATCTTCGAGTCTGCCCCTTGTTGCTGAGGATTCGACCACACTAAAATTGCCCACC
TTGTTGGCAATCGTCACTTCGGAGTTGACTAGCTTGTTGACGGCCATCTACGTGTTGGCATATTTCGGATCCTCC
TGGGCCTTTCTTTGGATGGCGCCTTTGGTTATTCGGCTGATCAGCGCGGCTTTCGCTCTCTACAGAGATCCGCTC
ATAGATCCTCGCCTACGTTCCGATGCAGACAATGCCGAGGCGTGCTTCAAAGTCCACACAGACCAGCCAAACGGC
CACTTCATGCTCTTCACTGGACCCCGTCTGCTCGTACAGCAATTCTTCGAACATTACGGGCACCCTAGGCGACAC
CGCGTGCGGGAGATGGTGCAAGTAACGACGTTGATCTTCTTTTACGTCTCGTTCCCACTACAGCTTCTAGCATCC
CTTGTATGGATGCCGCTGCAGGTGCAATACGTATGGCTTTGCTATCAAATGTACGCCGTCGTGGCAACGCACATT
ACTCGATACAGCCGCGTTGGCCTCGTCGACACCGCGCATGGCATAGCGAAGGCTTTCACGGAGCCGGAGCATCAG
CAAGATTCTCCTTACTCCCATAGGGCATGCACTATTCTTTTTGGGAGTGACAGGCAATCACCTTCGACCCTCGTC
GTTTCTCTTGCCGTCACCTATCACAGTCGCTACATGGAGGGAAAGAAGGCCATGGAGAGTCTACTGAAGGACTTT
TCGACGCTCTCTGCTCAGGAGGCAGAGTCAAGCCGAGTCGAGAGACAGGATACGGAGGTATGCAAGTCCACGTCG
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail