Protein ID | Ophio5|2505 |
Gene name | |
Location | scaffold_207:14606..16192 |
Strand | + |
Gene length (bp) | 1586 |
Transcript length (bp) | 1482 |
Coding sequence length (bp) | 1479 |
Protein length (aa) | 493 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF19287 | DUF5910 | Family of unknown function (DUF5910) | 6.8E-18 | 74 | 202 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 22 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2505 MASKALLLWLIALAFVGLVSSNITMRPALSKSLPRPNFDGHDRVILGYRRISPEQAKQYEEAGTVTYTGPRHQTQ IGVGTYLTPGYNQWPSEDTDVNCVISADKDKLAATSIVWLPNNVLGSSKGTIARAIKQADPDAKPDSTIRLSVIM EMSNRPKPVYQMLIPPSLLGSGASSRLDLQVNCEKYPGQPGIRGPSVDFFQWRKGPVPKEPLTESDKIGSIGEMR ELLPDEVVETFDLQQIGQARDAMTGAIYDARQGAEEVVTKWNSCQNDLKAAECKGEILAYLDARKSYANFIYATS ERTLQILEWMHKSERDGNKKAEVVKKIDDFATSLEEQTKAKKDDVEILTRAESETEGFDGFKALCDLELLAIQAD VEETENKSSNLVTNAKNIARRLKGEKVDEEPTTPNPEKASTKIPKSSEITDKEKGAEDAMEKSEKNSEGDPEEGQ EYVPQEAPRLDSGPSGRKIRGARFELDRAEASRRACKKSAPKA |
Coding | >Ophio5|2505 ATGGCCTCCAAGGCTCTTCTTCTCTGGCTCATTGCCCTGGCTTTCGTTGGTCTAGTTTCCAGCAATATTACCATG AGACCGGCGCTCTCAAAGAGCCTTCCTCGTCCTAATTTCGATGGACATGACCGTGTCATATTGGGCTATAGACGC ATCTCACCGGAGCAAGCAAAGCAGTATGAAGAAGCCGGAACGGTCACATACACCGGGCCCCGGCATCAAACGCAA ATAGGCGTCGGAACCTATCTGACACCGGGCTATAATCAATGGCCATCGGAGGATACGGACGTCAACTGCGTCATC TCTGCCGACAAGGACAAGCTCGCAGCGACGAGCATAGTGTGGCTACCGAATAACGTACTCGGCTCGTCGAAGGGC ACCATAGCCCGTGCCATCAAACAGGCCGATCCAGATGCGAAGCCCGATTCAACGATAAGACTATCAGTCATCATG GAGATGTCAAACCGCCCGAAGCCGGTATATCAGATGCTCATCCCGCCGTCCCTGCTGGGTTCTGGTGCCAGTTCT CGGTTAGATCTGCAAGTGAACTGCGAAAAATATCCTGGGCAACCTGGAATTAGAGGTCCGAGTGTCGACTTTTTT CAGTGGCGCAAGGGTCCTGTGCCAAAAGAACCACTTACGGAGTCTGATAAGATCGGGAGCATAGGGGAGATGCGC GAACTGTTACCTGATGAGGTCGTCGAAACTTTTGATCTACAACAGATCGGCCAAGCGCGAGACGCCATGACAGGC GCAATATATGATGCCAGGCAAGGCGCTGAAGAAGTAGTCACCAAGTGGAACAGTTGCCAGAATGACTTGAAAGCA GCAGAGTGCAAAGGCGAGATCTTAGCTTACTTGGATGCGAGAAAGTCATACGCGAATTTCATCTACGCCACGAGC GAGCGGACCCTACAGATTCTCGAGTGGATGCATAAAAGCGAAAGGGATGGGAATAAGAAGGCCGAGGTGGTGAAA AAAATTGATGACTTCGCCACCAGTCTTGAGGAACAGACAAAGGCCAAAAAAGACGATGTAGAAATCCTGACAAGG GCTGAATCGGAGACCGAGGGGTTCGATGGCTTCAAGGCATTGTGTGATCTCGAGTTACTCGCCATCCAAGCTGAC GTGGAAGAAACCGAAAATAAGTCGTCTAACTTGGTCACGAACGCGAAGAACATAGCAAGGAGGCTGAAGGGGGAA AAGGTGGACGAGGAACCAACGACACCGAACCCAGAGAAAGCATCTACGAAGATTCCGAAAAGTAGCGAAATAACG GACAAGGAGAAGGGAGCAGAAGATGCTATGGAGAAATCGGAGAAGAACTCGGAGGGGGACCCGGAGGAGGGACAA GAATATGTTCCGCAAGAGGCCCCGCGGCTAGATTCCGGGCCCTCAGGACGTAAAATTCGCGGAGCCCGGTTCGAG TTGGACAGAGCAGAGGCGAGCAGGAGGGCTTGCAAGAAGAGTGCACCGAAAGCT |
Transcript | >Ophio5|2505 ATGGCCTCCAAGGCTCTTCTTCTCTGGCTCATTGCCCTGGCTTTCGTTGGTCTAGTTTCCAGCAATATTACCATG AGACCGGCGCTCTCAAAGAGCCTTCCTCGTCCTAATTTCGATGGACATGACCGTGTCATATTGGGCTATAGACGC ATCTCACCGGAGCAAGCAAAGCAGTATGAAGAAGCCGGAACGGTCACATACACCGGGCCCCGGCATCAAACGCAA ATAGGCGTCGGAACCTATCTGACACCGGGCTATAATCAATGGCCATCGGAGGATACGGACGTCAACTGCGTCATC TCTGCCGACAAGGACAAGCTCGCAGCGACGAGCATAGTGTGGCTACCGAATAACGTACTCGGCTCGTCGAAGGGC ACCATAGCCCGTGCCATCAAACAGGCCGATCCAGATGCGAAGCCCGATTCAACGATAAGACTATCAGTCATCATG GAGATGTCAAACCGCCCGAAGCCGGTATATCAGATGCTCATCCCGCCGTCCCTGCTGGGTTCTGGTGCCAGTTCT CGGTTAGATCTGCAAGTGAACTGCGAAAAATATCCTGGGCAACCTGGAATTAGAGGTCCGAGTGTCGACTTTTTT CAGTGGCGCAAGGGTCCTGTGCCAAAAGAACCACTTACGGAGTCTGATAAGATCGGGAGCATAGGGGAGATGCGC GAACTGTTACCTGATGAGGTCGTCGAAACTTTTGATCTACAACAGATCGGCCAAGCGCGAGACGCCATGACAGGC GCAATATATGATGCCAGGCAAGGCGCTGAAGAAGTAGTCACCAAGTGGAACAGTTGCCAGAATGACTTGAAAGCA GCAGAGTGCAAAGGCGAGATCTTAGCTTACTTGGATGCGAGAAAGTCATACGCGAATTTCATCTACGCCACGAGC GAGCGGACCCTACAGATTCTCGAGTGGATGCATAAAAGCGAAAGGGATGGGAATAAGAAGGCCGAGGTGGTGAAA AAAATTGATGACTTCGCCACCAGTCTTGAGGAACAGACAAAGGCCAAAAAAGACGATGTAGAAATCCTGACAAGG GCTGAATCGGAGACCGAGGGGTTCGATGGCTTCAAGGCATTGTGTGATCTCGAGTTACTCGCCATCCAAGCTGAC GTGGAAGAAACCGAAAATAAGTCGTCTAACTTGGTCACGAACGCGAAGAACATAGCAAGGAGGCTGAAGGGGGAA AAGGTGGACGAGGAACCAACGACACCGAACCCAGAGAAAGCATCTACGAAGATTCCGAAAAGTAGCGAAATAACG GACAAGGAGAAGGGAGCAGAAGATGCTATGGAGAAATCGGAGAAGAACTCGGAGGGGGACCCGGAGGAGGGACAA GAATATGTTCCGCAAGAGGCCCCGCGGCTAGATTCCGGGCCCTCAGGACGTAAAATTCGCGGAGCCCGGTTCGAG TTGGACAGAGCAGAGGCGAGCAGGAGGGCTTGCAAGAAGAGTGCACCGAAAGCTTAG |
Gene | >Ophio5|2505 ATGGCCTCCAAGGCTCTTCTTCTCTGGCTCATTGCCCTGGCTTTCGTTGGTCTAGTTTCCAGCAATATTACCATG AGACCGGCGCTCTCAAAGAGCCTTCCTCGTCCTAATTTCGATGGACATGACCGTGTCATATTGGGCTATAGACGC ATCTCACCGGTACGGGCCTGACAACCCTTTCGATTGGCATCGCGACTGATTGGAAGTGATAGGAGCAAGCAAAGC AGTATGAAGAAGCCGGAACGGTCACATACACCGGGCCCCGGCATCAAACGCAAATAGGCGTCGGAACCTATCTGA CACCGGGCTATAATCAATGGCCATCGGAGGATACGGACGTGTGAGTATTCGTGATTTCCGCTTCGAGAACAGTAA GATTGACCTCGCATAGCAACTGCGTCATCTCTGCCGACAAGGACAAGCTCGCAGCGACGAGCATAGTGTGGCTAC CGAATAACGTACTCGGCTCGTCGAAGGGCACCATAGCCCGTGCCATCAAACAGGCCGATCCAGATGCGAAGCCCG ATTCAACGATAAGACTATCAGTCATCATGGAGATGTCAAACCGCCCGAAGCCGGTATATCAGATGCTCATCCCGC CGTCCCTGCTGGGTTCTGGTGCCAGTTCTCGGTTAGATCTGCAAGTGAACTGCGAAAAATATCCTGGGCAACCTG GAATTAGAGGTCCGAGTGTCGACTTTTTTCAGTGGCGCAAGGGTCCTGTGCCAAAAGAACCACTTACGGAGTCTG ATAAGATCGGGAGCATAGGGGAGATGCGCGAACTGTTACCTGATGAGGTCGTCGAAACTTTTGATCTACAACAGA TCGGCCAAGCGCGAGACGCCATGACAGGCGCAATATATGATGCCAGGCAAGGCGCTGAAGAAGTAGTCACCAAGT GGAACAGTTGCCAGAATGACTTGAAAGCAGCAGAGTGCAAAGGCGAGATCTTAGCTTACTTGGATGCGAGAAAGT CATACGCGAATTTCATCTACGCCACGAGCGAGCGGACCCTACAGATTCTCGAGTGGATGCATAAAAGCGAAAGGG ATGGGAATAAGAAGGCCGAGGTGGTGAAAAAAATTGATGACTTCGCCACCAGTCTTGAGGAACAGACAAAGGCCA AAAAAGACGATGTAGAAATCCTGACAAGGGCTGAATCGGAGACCGAGGGGTTCGATGGCTTCAAGGCATTGTGTG ATCTCGAGTTACTCGCCATCCAAGCTGACGTGGAAGAAACCGAAAATAAGTCGTCTAACTTGGTCACGAACGCGA AGAACATAGCAAGGAGGCTGAAGGGGGAAAAGGTGGACGAGGAACCAACGACACCGAACCCAGAGAAAGCATCTA CGAAGATTCCGAAAAGTAGCGAAATAACGGACAAGGAGAAGGGAGCAGAAGATGCTATGGAGAAATCGGAGAAGA ACTCGGAGGGGGACCCGGAGGAGGGACAAGAATATGTTCCGCAAGAGGCCCCGCGGCTAGATTCCGGGCCCTCAG GACGTAAAATTCGCGGAGCCCGGTTCGAGTTGGACAGAGCAGAGGCGAGCAGGAGGGCTTGCAAGAAGAGTGCAC CGAAAGCTTAG |