Fungal Genomics

General Properties

Protein ID	Ophio5|2499
Gene name
Location	scaffold_206:25695..25982
Strand	-
Gene length (bp)	287
Transcript length (bp)	228
Coding sequence length (bp)	225
Protein length (aa)	75

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Nucleus		0.427	0.5739	0.1959	0.1394	0.2245	0.253	0.1964	0.2269	0.0931	0.0248

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	0.63	0.00	2.25
CcL	In ants, during behavior modification	6.95	0.77	13.13
CcD	In ants, recently dead	2.02	0.00	5.30

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.239606	no
SC16a	CcD	1.000000	no
CcL	CcD	0.288966	no

Orthologs

Orthofinder run ID	4
Orthogroup	15708
Change Orthofinder run	4: Insect Pathogens

Species	Protein ID
Ophiocordyceps kimflemingae	Ophio5|2499 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5|2499 MSPPTHHPLTPSSLLFLTLFFFGGRGGKTDEGAPRSVSCRRRRLASDRCLLHTTSIEQLDESSRGKADEQSPEFE
Coding	>Ophio5|2499 ATGTCGCCCCCCACCCACCACCCTCTTACCCCTTCTTCTCTGCTCTTCCTCACCCTGTTTTTTTTTGGGGGGAGG GGGGGGAAGACAGACGAGGGCGCGCCGCGGTCCGTCTCTTGTCGCCGTCGCCGTCTCGCGAGCGACAGATGCCTC TTGCACACTACCTCGATTGAACAGCTGGACGAGTCGTCTCGGGGGAAAGCGGACGAGCAAAGTCCAGAGTTCGAA
Transcript	>Ophio5|2499 ATGTCGCCCCCCACCCACCACCCTCTTACCCCTTCTTCTCTGCTCTTCCTCACCCTGTTTTTTTTTGGGGGGAGG GGGGGGAAGACAGACGAGGGCGCGCCGCGGTCCGTCTCTTGTCGCCGTCGCCGTCTCGCGAGCGACAGATGCCTC TTGCACACTACCTCGATTGAACAGCTGGACGAGTCGTCTCGGGGGAAAGCGGACGAGCAAAGTCCAGAGTTCGAA TAA
Gene	>Ophio5|2499 ATGTCGCCCCCCACCCACCACCCTCTTACCCCTTCTTCTCTGCTCTTCCTCACCCTGTTTTTTTTTGGGGGGAGG GGGGGGAAGACAGACGAGGGCGCGCCGCGGTCCGTCTCTTGTCGCCGTCGCCGTCTCGGTCGGTCTATATAACCC CATCAACTGCTGAGCATCATCACACTGACAAACCGGTCAAAGCGAGCGACAGATGCCTCTTGCACACTACCTCGA TTGAACAGCTGGACGAGTCGTCTCGGGGGAAAGCGGACGAGCAAAGTCCAGAGTTCGAATAA