Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2489
Gene name
Locationscaffold_205:28984..30396
Strand-
Gene length (bp)1412
Transcript length (bp)1281
Coding sequence length (bp)1278
Protein length (aa) 426

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11735 CAP59_mtransfer Cryptococcal mannosyltransferase 1 3.8E-85 77 328

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 61 0.5

Transmembrane Domains

Domain # Start End Length
1 34 56 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2489
MLPLKLGKLTRIQWPRSLRSGDARTMRLRRTLRWRTVRLLALLFCLFSVLEVLWIHGKLAGGDQQRSTTDPSRPH
ERIYIASMHFNNGDILRHHWNDAVIRLTEVFGPANVFVSILESGSWDDSKELLQELARELERRGVPHRVEISDVT
HHDEIAKEAKGAGWIDTPRNRRELRRIPYLARLRNKTIQDLLDLGEKGTTFDKVLFLNDVVFTTEDVLTLMDTNG
GDYGAACSLDFSKPPLYYDTFALRDAEGNGHVMQTWPYLGARLSRNALVNHLDAVPVASCWNGIVVMPAEPFVSS
TKLRFRGIPDSLAAYHLEGSECCLIHADNPLSKTLGVYLNPRVRVGYNLAAYDATHRGTTWVSAWGIFTGLWINR
IRRWTTFTLDNVVVNRRVKRWERKHVGSHEPGRFCLINEMQVLADNGWAHV
Coding >Ophio5|2489
ATGCTGCCTCTCAAGCTCGGCAAGCTGACCAGAATCCAATGGCCTCGGTCGCTGCGCTCGGGAGACGCCCGCACA
ATGCGCCTCCGCCGGACCCTGCGATGGCGAACAGTGAGGCTTCTGGCCTTGCTCTTCTGCCTCTTCAGCGTCCTC
GAAGTGCTCTGGATCCACGGCAAGCTCGCCGGCGGCGACCAACAACGAAGCACGACCGACCCTTCGCGGCCGCAC
GAGCGCATCTACATCGCGAGCATGCACTTCAACAACGGCGACATCCTGAGGCATCACTGGAATGATGCGGTGATC
CGGCTCACGGAGGTGTTCGGGCCGGCCAACGTCTTCGTGAGCATCTTGGAAAGCGGCAGCTGGGACGACAGCAAG
GAGCTTCTCCAGGAACTGGCGCGCGAGCTTGAGCGGCGAGGCGTGCCGCATCGGGTGGAAATATCCGACGTGACA
CATCATGATGAGATCGCCAAGGAGGCTAAGGGCGCGGGGTGGATCGACACGCCCCGGAACAGGAGGGAGCTGCGG
CGCATCCCTTACCTCGCGCGGTTGCGCAACAAGACGATTCAAGACCTGCTGGACCTCGGCGAGAAGGGCACCACC
TTTGACAAGGTGCTGTTCCTCAACGACGTCGTCTTCACGACCGAAGACGTGTTGACGCTCATGGACACGAATGGC
GGCGACTACGGCGCCGCATGCTCGCTCGACTTCTCCAAGCCACCTCTCTACTACGACACGTTTGCGCTGAGGGAC
GCCGAGGGCAACGGACATGTCATGCAGACGTGGCCCTACCTCGGAGCCAGGCTGTCGAGGAATGCGCTGGTGAAC
CATCTTGACGCCGTGCCCGTGGCGAGCTGTTGGAACGGCATAGTGGTAATGCCTGCGGAGCCTTTCGTCTCGTCG
ACGAAGCTGCGCTTTCGCGGGATCCCCGACTCGCTTGCGGCGTACCACCTCGAGGGCTCCGAGTGCTGCCTCATC
CACGCCGACAACCCGCTGTCTAAGACGTTGGGCGTGTACCTCAATCCGCGGGTGCGCGTGGGCTACAACCTGGCG
GCCTACGACGCGACACATCGCGGCACCACATGGGTGTCCGCGTGGGGTATTTTCACGGGCCTGTGGATTAACCGC
ATCAGACGCTGGACGACGTTTACGCTCGACAACGTCGTCGTCAACCGGCGGGTTAAGCGCTGGGAAAGGAAGCAC
GTCGGGAGCCATGAGCCGGGCAGGTTCTGCTTGATTAACGAGATGCAGGTTCTCGCCGACAATGGCTGGGCCCAC
GTC
Transcript >Ophio5|2489
ATGCTGCCTCTCAAGCTCGGCAAGCTGACCAGAATCCAATGGCCTCGGTCGCTGCGCTCGGGAGACGCCCGCACA
ATGCGCCTCCGCCGGACCCTGCGATGGCGAACAGTGAGGCTTCTGGCCTTGCTCTTCTGCCTCTTCAGCGTCCTC
GAAGTGCTCTGGATCCACGGCAAGCTCGCCGGCGGCGACCAACAACGAAGCACGACCGACCCTTCGCGGCCGCAC
GAGCGCATCTACATCGCGAGCATGCACTTCAACAACGGCGACATCCTGAGGCATCACTGGAATGATGCGGTGATC
CGGCTCACGGAGGTGTTCGGGCCGGCCAACGTCTTCGTGAGCATCTTGGAAAGCGGCAGCTGGGACGACAGCAAG
GAGCTTCTCCAGGAACTGGCGCGCGAGCTTGAGCGGCGAGGCGTGCCGCATCGGGTGGAAATATCCGACGTGACA
CATCATGATGAGATCGCCAAGGAGGCTAAGGGCGCGGGGTGGATCGACACGCCCCGGAACAGGAGGGAGCTGCGG
CGCATCCCTTACCTCGCGCGGTTGCGCAACAAGACGATTCAAGACCTGCTGGACCTCGGCGAGAAGGGCACCACC
TTTGACAAGGTGCTGTTCCTCAACGACGTCGTCTTCACGACCGAAGACGTGTTGACGCTCATGGACACGAATGGC
GGCGACTACGGCGCCGCATGCTCGCTCGACTTCTCCAAGCCACCTCTCTACTACGACACGTTTGCGCTGAGGGAC
GCCGAGGGCAACGGACATGTCATGCAGACGTGGCCCTACCTCGGAGCCAGGCTGTCGAGGAATGCGCTGGTGAAC
CATCTTGACGCCGTGCCCGTGGCGAGCTGTTGGAACGGCATAGTGGTAATGCCTGCGGAGCCTTTCGTCTCGTCG
ACGAAGCTGCGCTTTCGCGGGATCCCCGACTCGCTTGCGGCGTACCACCTCGAGGGCTCCGAGTGCTGCCTCATC
CACGCCGACAACCCGCTGTCTAAGACGTTGGGCGTGTACCTCAATCCGCGGGTGCGCGTGGGCTACAACCTGGCG
GCCTACGACGCGACACATCGCGGCACCACATGGGTGTCCGCGTGGGGTATTTTCACGGGCCTGTGGATTAACCGC
ATCAGACGCTGGACGACGTTTACGCTCGACAACGTCGTCGTCAACCGGCGGGTTAAGCGCTGGGAAAGGAAGCAC
GTCGGGAGCCATGAGCCGGGCAGGTTCTGCTTGATTAACGAGATGCAGGTTCTCGCCGACAATGGCTGGGCCCAC
GTCTGA
Gene >Ophio5|2489
ATGCTGCCTCTCAAGCTCGGCAAGCTGACCAGAATCCAATGGCCTCGGTCGCTGCGCTCGGGAGACGCCCGCACA
ATGCGCCTCCGCCGGACCCTGCGATGGCGAACAGTGAGGCTTCTGGCCTTGCTCTTCTGCCTCTTCAGCGTCCTC
GAAGTGCTCTGGATCCACGGCAAGCTCGCCGGCGGCGACCAACAACGAAGCACGACCGACCCTTCGCGGCCGCAC
GAGCGCATCTACATCGCGAGCATGCACTTCAACAACGGCGACATCCTGAGGCATCACTGGAATGATGCGGTGATC
CGGCTCACGGAGGTGTTCGGGCCGGCCAACGTCTTCGTGAGCATCTTGGAAAGCGGCAGCTGGGACGACAGCAAG
GAGCTTCTCCAGGAACTGGCGCGCGAGCTTGAGCGGCGAGGCGTGCCGCATCGGGTGGAAATATCCGACGTGACA
CATCATGATGAGATCGCCAAGGAGGCTAAGGGCGCGGGGTGGATCGACACGCCCCGGAACAGGAGGGAGCTGCGG
CGCATCCCTTACCTCGCGCGGTTGCGCAACAAGACGATTCAAGACCTGCTGGACCTCGGCGAGAAGGGCACCACC
TTTGACAAGGTGCTGTTCCTCAACGACGTCGTCTTCACGGTGGGTGATGCCGCTGTCGCTAACAACCCTCAGAGA
CCAAGCTGCTGACGACGCGAGAGAGCAAGACCGAAGACGTGTTGACGCTCATGGACACGAATGGCGGCGACTACG
GCGCCGCATGCTCGCTCGACTTCTCCAAGCCACCTCTCTACTACGACACGTTTGCGCTGAGGGACGCCGAGGGCA
ACGGACATGTCATGCAGACGTGGCCCTACCTCGGAGCCAGGCTGTCGAGGAATGCGCTGGTGAACCATCTTGACG
CCGTGCCCGTGGCGAGCTGTTGGAACGGCATAGGTACAGACACGCTATCCTTTTCCAGGATGGACCGAAAGCGGG
CAAGCTGACGCGGTTCGGTCGCAGTGGTAATGCCTGCGGAGCCTTTCGTCTCGTCGACGAAGCTGCGCTTTCGCG
GGATCCCCGACTCGCTTGCGGCGTACCACCTCGAGGGCTCCGAGTGCTGCCTCATCCACGCCGACAACCCGCTGT
CTAAGACGTTGGGCGTGTACCTCAATCCGCGGGTGCGCGTGGGCTACAACCTGGCGGCCTACGACGCGACACATC
GCGGCACCACATGGGTGTCCGCGTGGGGTATTTTCACGGGCCTGTGGATTAACCGCATCAGACGCTGGACGACGT
TTACGCTCGACAACGTCGTCGTCAACCGGCGGGTTAAGCGCTGGGAAAGGAAGCACGTCGGGAGCCATGAGCCGG
GCAGGTTCTGCTTGATTAACGAGATGCAGGTTCTCGCCGACAATGGCTGGGCCCACGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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