Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2465
Gene name
Locationscaffold_203:30512..31061
Strand-
Gene length (bp)549
Transcript length (bp)549
Coding sequence length (bp)546
Protein length (aa) 182

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12296 HsbA Hydrophobic surface binding protein A 2.2E-19 25 141

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8TG42|MP1_ASPFL Cell wall mannoprotein 1 OS=Aspergillus flavus GN=mp1 PE=2 SV=1 5 158 9.0E-13
sp|Q9HFP8|MP1_ASPFM Cell wall mannoprotein 1 OS=Neosartorya fumigata GN=MP1 PE=1 SV=1 8 170 2.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2465
MKCSLQLLIAALATASPLIFERDLASVTKVVQSVGSKIDALDTVIRNFAGDTAGVVTASEALVSTVMSGISEVEK
SEELPLNDAVKLIGPVADLEKHGQKLRDDLKSQRKQIRKLKKCEETRQQIRNISFAAQQLTKALTSKVPARARPI
AESKAKGFLDILATAKKDFDEDDCSDTKPDDD
Coding >Ophio5|2465
ATGAAGTGCTCTCTCCAGCTGCTCATCGCCGCTCTGGCCACCGCCAGCCCGCTCATCTTCGAACGCGACCTCGCA
TCCGTCACCAAAGTCGTGCAAAGCGTCGGGTCCAAGATTGACGCCCTAGACACCGTCATCCGAAACTTCGCAGGT
GACACAGCCGGCGTCGTCACCGCTTCCGAAGCACTCGTCTCCACCGTCATGTCCGGCATCTCGGAGGTGGAGAAG
TCGGAAGAGCTGCCGCTCAACGACGCCGTCAAGCTGATCGGACCCGTCGCGGACCTCGAGAAGCACGGTCAGAAG
CTCAGGGACGACCTCAAGTCTCAGCGTAAACAGATCCGCAAGCTCAAGAAATGCGAGGAGACGCGCCAGCAGATC
AGGAACATCTCGTTCGCTGCCCAGCAACTCACCAAAGCCCTCACCTCCAAGGTCCCCGCAAGAGCGCGCCCCATC
GCCGAATCCAAGGCCAAGGGATTCCTGGACATTCTTGCCACTGCCAAGAAAGATTTTGACGAGGACGACTGCAGC
GACACCAAGCCAGACGACGAC
Transcript >Ophio5|2465
ATGAAGTGCTCTCTCCAGCTGCTCATCGCCGCTCTGGCCACCGCCAGCCCGCTCATCTTCGAACGCGACCTCGCA
TCCGTCACCAAAGTCGTGCAAAGCGTCGGGTCCAAGATTGACGCCCTAGACACCGTCATCCGAAACTTCGCAGGT
GACACAGCCGGCGTCGTCACCGCTTCCGAAGCACTCGTCTCCACCGTCATGTCCGGCATCTCGGAGGTGGAGAAG
TCGGAAGAGCTGCCGCTCAACGACGCCGTCAAGCTGATCGGACCCGTCGCGGACCTCGAGAAGCACGGTCAGAAG
CTCAGGGACGACCTCAAGTCTCAGCGTAAACAGATCCGCAAGCTCAAGAAATGCGAGGAGACGCGCCAGCAGATC
AGGAACATCTCGTTCGCTGCCCAGCAACTCACCAAAGCCCTCACCTCCAAGGTCCCCGCAAGAGCGCGCCCCATC
GCCGAATCCAAGGCCAAGGGATTCCTGGACATTCTTGCCACTGCCAAGAAAGATTTTGACGAGGACGACTGCAGC
GACACCAAGCCAGACGACGACTGA
Gene >Ophio5|2465
ATGAAGTGCTCTCTCCAGCTGCTCATCGCCGCTCTGGCCACCGCCAGCCCGCTCATCTTCGAACGCGACCTCGCA
TCCGTCACCAAAGTCGTGCAAAGCGTCGGGTCCAAGATTGACGCCCTAGACACCGTCATCCGAAACTTCGCAGGT
GACACAGCCGGCGTCGTCACCGCTTCCGAAGCACTCGTCTCCACCGTCATGTCCGGCATCTCGGAGGTGGAGAAG
TCGGAAGAGCTGCCGCTCAACGACGCCGTCAAGCTGATCGGACCCGTCGCGGACCTCGAGAAGCACGGTCAGAAG
CTCAGGGACGACCTCAAGTCTCAGCGTAAACAGATCCGCAAGCTCAAGAAATGCGAGGAGACGCGCCAGCAGATC
AGGAACATCTCGTTCGCTGCCCAGCAACTCACCAAAGCCCTCACCTCCAAGGTCCCCGCAAGAGCGCGCCCCATC
GCCGAATCCAAGGCCAAGGGATTCCTGGACATTCTTGCCACTGCCAAGAAAGATTTTGACGAGGACGACTGCAGC
GACACCAAGCCAGACGACGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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