Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2461
Gene name
Locationscaffold_203:20182..21007
Strand-
Gene length (bp)825
Transcript length (bp)726
Coding sequence length (bp)723
Protein length (aa) 241

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09056 Phospholip_A2_3 Prokaryotic phospholipase A2 3.1E-33 45 147

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B0M5|A2001_ARTBC Uncharacterized secreted protein ARB_02001 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02001 PE=1 SV=1 43 148 5.0E-21

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2461
MRLSLEPMKLFLVPLLFASLTSAQQGPVDVNATGLISAQDLLAHTDHIIFNITLEQFRFTRKSGLWGALDWSSDG
CSHSPDNPFKFPFVPACYRHDFAYRNYKRQKRFTEINRERIDNNFLKDTVSWATRDACRHLAKVYYLSVRRWGAR
GVTMDNPGVEVKMVDTKAGVPTAGDQTSGKLVSKEDKDMKEAMVNYLQAVDHAQRANQLPGPDLKGKRVEVSIAN
DKLEVKQYNRNETTDD
Coding >Ophio5|2461
ATGAGGCTCTCTCTGGAACCGATGAAGCTCTTTCTCGTACCTCTCCTCTTCGCCAGCCTCACCTCCGCTCAACAA
GGGCCAGTGGACGTCAACGCAACAGGTTTAATATCGGCCCAGGACTTGTTAGCTCATACCGACCACATCATCTTC
AACATCACTCTGGAACAGTTCCGATTCACCCGAAAGAGTGGTCTTTGGGGGGCTCTCGACTGGTCTTCGGACGGC
TGCTCCCACTCGCCCGACAATCCTTTCAAATTCCCCTTTGTGCCGGCCTGCTATCGCCACGACTTTGCCTACCGG
AACTATAAAAGACAGAAGCGCTTCACTGAGATCAATAGAGAGCGCATCGACAACAACTTTTTGAAAGATACTGTC
TCTTGGGCTACAAGGGATGCCTGCCGTCATCTGGCCAAAGTCTACTACCTATCAGTGCGCCGTTGGGGCGCCCGC
GGTGTCACAATGGATAACCCAGGGGTCGAGGTAAAGATGGTGGACACAAAGGCCGGTGTTCCGACGGCTGGTGAT
CAGACGTCTGGTAAGTTAGTCTCGAAAGAGGACAAGGACATGAAAGAAGCCATGGTCAACTACCTGCAAGCCGTC
GACCATGCCCAGAGAGCAAACCAGTTGCCGGGCCCCGATTTGAAGGGCAAGAGAGTGGAGGTGAGTATTGCAAAT
GATAAGCTGGAGGTGAAGCAATACAATCGTAATGAAACAACGGATGAT
Transcript >Ophio5|2461
ATGAGGCTCTCTCTGGAACCGATGAAGCTCTTTCTCGTACCTCTCCTCTTCGCCAGCCTCACCTCCGCTCAACAA
GGGCCAGTGGACGTCAACGCAACAGGTTTAATATCGGCCCAGGACTTGTTAGCTCATACCGACCACATCATCTTC
AACATCACTCTGGAACAGTTCCGATTCACCCGAAAGAGTGGTCTTTGGGGGGCTCTCGACTGGTCTTCGGACGGC
TGCTCCCACTCGCCCGACAATCCTTTCAAATTCCCCTTTGTGCCGGCCTGCTATCGCCACGACTTTGCCTACCGG
AACTATAAAAGACAGAAGCGCTTCACTGAGATCAATAGAGAGCGCATCGACAACAACTTTTTGAAAGATACTGTC
TCTTGGGCTACAAGGGATGCCTGCCGTCATCTGGCCAAAGTCTACTACCTATCAGTGCGCCGTTGGGGCGCCCGC
GGTGTCACAATGGATAACCCAGGGGTCGAGGTAAAGATGGTGGACACAAAGGCCGGTGTTCCGACGGCTGGTGAT
CAGACGTCTGGTAAGTTAGTCTCGAAAGAGGACAAGGACATGAAAGAAGCCATGGTCAACTACCTGCAAGCCGTC
GACCATGCCCAGAGAGCAAACCAGTTGCCGGGCCCCGATTTGAAGGGCAAGAGAGTGGAGGTGAGTATTGCAAAT
GATAAGCTGGAGGTGAAGCAATACAATCGTAATGAAACAACGGATGATTGA
Gene >Ophio5|2461
ATGAGGCTCTCTCTGGAACCGATGAAGCTCTTTCTCGTACCTCTCCTCTTCGCCAGCCTCACCTCCGCTCAACAA
GGGCCAGTGGACGTCAACGCAACAGGTTTAATATCGGCCCAGGACTTGTTAGCTCATACCGACCACATCATCTTC
AACATCACTCTGGAACAGTTCCGATTCACCCGAAAGAGTGGTCTTTGGGGGGCTCTCGACTGGTCTTCGGACGGC
TGCTCCCACTCGCCCGACAATCCTTTCAAATTCCCCTTTGTGCCGGCCTGCTATCGCCACGACTTTGCCTACCGG
AACTATAAAAGACAGAAGCGCTTCACTGAGATCAATAGAGAGCGCATCGACAACAACTTTTTGAAAGAGTGAGCC
ATCCTTCCGCTTTAGCCAATCTCCAGAAATCATCACTGCCTTCTCGACCGCAGCTAACATTCAACGACGTCCAGC
CTTAATACCATGTGCAGTACTGTCTCTTGGGCTACAAGGGATGCCTGCCGTCATCTGGCCAAAGTCTACTACCTA
TCAGTGCGCCGTTGGGGCGCCCGCGGTGTCACAATGGATAACCCAGGGGTCGAGGTAAAGATGGTGGACACAAAG
GCCGGTGTTCCGACGGCTGGTGATCAGACGTCTGGTAAGTTAGTCTCGAAAGAGGACAAGGACATGAAAGAAGCC
ATGGTCAACTACCTGCAAGCCGTCGACCATGCCCAGAGAGCAAACCAGTTGCCGGGCCCCGATTTGAAGGGCAAG
AGAGTGGAGGTGAGTATTGCAAATGATAAGCTGGAGGTGAAGCAATACAATCGTAATGAAACAACGGATGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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