Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2459
Gene name
Locationscaffold_203:14659..16225
Strand-
Gene length (bp)1566
Transcript length (bp)1566
Coding sequence length (bp)1563
Protein length (aa) 521

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 2.0E-08 233 494

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9GUC9|YFEF9_CAEEL Uncharacterized protein F14F9.5 OS=Caenorhabditis elegans GN=F14F9.5 PE=1 SV=2 230 501 6.0E-40

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2459
MRLLRPASSFIFPGLTALLLLMSPGGIVAAPDGSLSWSDGEAPFTFHYATSQPDSKNWIGLYNSFYGGPDNGSYV
ANSLAWAYAPEGDGSVKVPPPGNLQPGIYKAFFLAKDGYQHLSDPIDVAFGNGSLSFLLDEFTTRNGRQGDAFSA
SIKGLITNQRDTKTKFAKTASDGDGGDWVQVSDDGILSGTPDAGGEKRVTVEATGSDGTKAQLKVKIPVRDAGSP
LVDRIGVLSFNMWHGGSQVNDYHRKQVKYLAGSNVDIVGLQESNDGQAIRLGQALGWDSWQGRDVGIISRYPMVE
RFNATEAGGAVRIALDGDDSQVIAWNAHLGYTPYGPYDFCFDHLSMDQVMKHEADSGRTPQILEIMARMKPDLAN
SDKVPVLLTGDMNAPSHLDWTEATRGQHCNVGAVAWPSSEEPIKGGLVDSYREVHKDPVADPGITWSPIYLDNEG
RPEPLDRIDFVYHKGLDVVDSVHEVVGQPQAEPNHKDNEWTSDHAAVRSTFQVPAKQKKRGVEREALRFKN
Coding >Ophio5|2459
ATGCGGCTGCTGCGCCCTGCTTCGTCCTTCATCTTCCCTGGCTTGACGGCCCTTCTCCTCCTGATGAGTCCGGGA
GGAATCGTTGCCGCGCCGGACGGCAGCCTCTCTTGGTCCGACGGCGAAGCTCCTTTCACCTTTCACTACGCAACA
TCGCAGCCTGACAGCAAGAATTGGATCGGCCTGTACAATTCGTTTTATGGCGGGCCCGACAACGGGTCGTATGTG
GCTAATTCGCTGGCCTGGGCCTACGCCCCTGAGGGCGACGGAAGCGTCAAGGTCCCTCCGCCCGGAAACCTGCAG
CCGGGCATCTACAAGGCCTTTTTCCTCGCCAAAGATGGATATCAGCATCTCTCCGACCCGATTGATGTGGCTTTT
GGAAATGGTTCCTTGTCGTTCTTGCTTGACGAGTTCACGACGCGCAATGGCCGTCAGGGGGACGCCTTCAGCGCC
AGCATCAAGGGCTTGATCACCAACCAACGCGACACAAAGACCAAATTTGCCAAGACGGCGTCTGACGGCGACGGC
GGCGACTGGGTCCAGGTGTCTGACGATGGAATCCTCTCCGGCACACCAGACGCTGGCGGCGAGAAGCGAGTGACG
GTCGAGGCGACGGGCTCCGATGGGACCAAGGCTCAGCTCAAGGTCAAGATACCGGTTCGGGACGCGGGCTCGCCG
CTCGTGGACCGCATTGGCGTGCTCTCCTTTAACATGTGGCACGGCGGCTCGCAGGTCAACGACTATCACCGCAAG
CAGGTCAAGTACCTGGCCGGCAGCAACGTCGACATCGTCGGGCTTCAGGAGAGTAACGACGGACAGGCGATCCGG
CTCGGCCAGGCCCTGGGCTGGGACTCGTGGCAGGGCAGAGACGTGGGCATCATCAGTCGATATCCCATGGTCGAG
AGGTTCAATGCGACAGAGGCGGGCGGAGCGGTGCGAATTGCTCTCGACGGCGACGACAGCCAGGTAATAGCCTGG
AACGCCCATCTGGGCTACACGCCGTACGGACCGTACGACTTTTGCTTCGACCACCTGTCCATGGACCAAGTCATG
AAGCACGAGGCCGATTCCGGCCGGACGCCGCAGATCCTCGAGATCATGGCCCGTATGAAGCCGGATCTGGCCAAC
TCAGACAAGGTGCCGGTGCTGCTAACGGGCGACATGAACGCGCCCTCTCACCTGGACTGGACCGAGGCGACGCGA
GGCCAGCACTGTAACGTCGGAGCGGTGGCGTGGCCCAGCTCCGAGGAGCCCATCAAGGGCGGGCTGGTCGACTCG
TATCGCGAGGTGCACAAGGACCCGGTGGCGGATCCGGGCATCACCTGGTCTCCCATCTATCTCGACAACGAGGGC
CGGCCCGAGCCTTTGGACCGCATCGACTTTGTCTATCACAAGGGCTTGGATGTGGTCGATTCGGTTCACGAGGTG
GTGGGACAGCCTCAGGCGGAGCCGAACCACAAGGACAACGAGTGGACGTCGGATCACGCGGCGGTGCGGTCGACA
TTTCAGGTGCCGGCCAAGCAGAAGAAGCGGGGCGTTGAGCGAGAGGCGTTGAGGTTTAAAAAT
Transcript >Ophio5|2459
ATGCGGCTGCTGCGCCCTGCTTCGTCCTTCATCTTCCCTGGCTTGACGGCCCTTCTCCTCCTGATGAGTCCGGGA
GGAATCGTTGCCGCGCCGGACGGCAGCCTCTCTTGGTCCGACGGCGAAGCTCCTTTCACCTTTCACTACGCAACA
TCGCAGCCTGACAGCAAGAATTGGATCGGCCTGTACAATTCGTTTTATGGCGGGCCCGACAACGGGTCGTATGTG
GCTAATTCGCTGGCCTGGGCCTACGCCCCTGAGGGCGACGGAAGCGTCAAGGTCCCTCCGCCCGGAAACCTGCAG
CCGGGCATCTACAAGGCCTTTTTCCTCGCCAAAGATGGATATCAGCATCTCTCCGACCCGATTGATGTGGCTTTT
GGAAATGGTTCCTTGTCGTTCTTGCTTGACGAGTTCACGACGCGCAATGGCCGTCAGGGGGACGCCTTCAGCGCC
AGCATCAAGGGCTTGATCACCAACCAACGCGACACAAAGACCAAATTTGCCAAGACGGCGTCTGACGGCGACGGC
GGCGACTGGGTCCAGGTGTCTGACGATGGAATCCTCTCCGGCACACCAGACGCTGGCGGCGAGAAGCGAGTGACG
GTCGAGGCGACGGGCTCCGATGGGACCAAGGCTCAGCTCAAGGTCAAGATACCGGTTCGGGACGCGGGCTCGCCG
CTCGTGGACCGCATTGGCGTGCTCTCCTTTAACATGTGGCACGGCGGCTCGCAGGTCAACGACTATCACCGCAAG
CAGGTCAAGTACCTGGCCGGCAGCAACGTCGACATCGTCGGGCTTCAGGAGAGTAACGACGGACAGGCGATCCGG
CTCGGCCAGGCCCTGGGCTGGGACTCGTGGCAGGGCAGAGACGTGGGCATCATCAGTCGATATCCCATGGTCGAG
AGGTTCAATGCGACAGAGGCGGGCGGAGCGGTGCGAATTGCTCTCGACGGCGACGACAGCCAGGTAATAGCCTGG
AACGCCCATCTGGGCTACACGCCGTACGGACCGTACGACTTTTGCTTCGACCACCTGTCCATGGACCAAGTCATG
AAGCACGAGGCCGATTCCGGCCGGACGCCGCAGATCCTCGAGATCATGGCCCGTATGAAGCCGGATCTGGCCAAC
TCAGACAAGGTGCCGGTGCTGCTAACGGGCGACATGAACGCGCCCTCTCACCTGGACTGGACCGAGGCGACGCGA
GGCCAGCACTGTAACGTCGGAGCGGTGGCGTGGCCCAGCTCCGAGGAGCCCATCAAGGGCGGGCTGGTCGACTCG
TATCGCGAGGTGCACAAGGACCCGGTGGCGGATCCGGGCATCACCTGGTCTCCCATCTATCTCGACAACGAGGGC
CGGCCCGAGCCTTTGGACCGCATCGACTTTGTCTATCACAAGGGCTTGGATGTGGTCGATTCGGTTCACGAGGTG
GTGGGACAGCCTCAGGCGGAGCCGAACCACAAGGACAACGAGTGGACGTCGGATCACGCGGCGGTGCGGTCGACA
TTTCAGGTGCCGGCCAAGCAGAAGAAGCGGGGCGTTGAGCGAGAGGCGTTGAGGTTTAAAAATTGA
Gene >Ophio5|2459
ATGCGGCTGCTGCGCCCTGCTTCGTCCTTCATCTTCCCTGGCTTGACGGCCCTTCTCCTCCTGATGAGTCCGGGA
GGAATCGTTGCCGCGCCGGACGGCAGCCTCTCTTGGTCCGACGGCGAAGCTCCTTTCACCTTTCACTACGCAACA
TCGCAGCCTGACAGCAAGAATTGGATCGGCCTGTACAATTCGTTTTATGGCGGGCCCGACAACGGGTCGTATGTG
GCTAATTCGCTGGCCTGGGCCTACGCCCCTGAGGGCGACGGAAGCGTCAAGGTCCCTCCGCCCGGAAACCTGCAG
CCGGGCATCTACAAGGCCTTTTTCCTCGCCAAAGATGGATATCAGCATCTCTCCGACCCGATTGATGTGGCTTTT
GGAAATGGTTCCTTGTCGTTCTTGCTTGACGAGTTCACGACGCGCAATGGCCGTCAGGGGGACGCCTTCAGCGCC
AGCATCAAGGGCTTGATCACCAACCAACGCGACACAAAGACCAAATTTGCCAAGACGGCGTCTGACGGCGACGGC
GGCGACTGGGTCCAGGTGTCTGACGATGGAATCCTCTCCGGCACACCAGACGCTGGCGGCGAGAAGCGAGTGACG
GTCGAGGCGACGGGCTCCGATGGGACCAAGGCTCAGCTCAAGGTCAAGATACCGGTTCGGGACGCGGGCTCGCCG
CTCGTGGACCGCATTGGCGTGCTCTCCTTTAACATGTGGCACGGCGGCTCGCAGGTCAACGACTATCACCGCAAG
CAGGTCAAGTACCTGGCCGGCAGCAACGTCGACATCGTCGGGCTTCAGGAGAGTAACGACGGACAGGCGATCCGG
CTCGGCCAGGCCCTGGGCTGGGACTCGTGGCAGGGCAGAGACGTGGGCATCATCAGTCGATATCCCATGGTCGAG
AGGTTCAATGCGACAGAGGCGGGCGGAGCGGTGCGAATTGCTCTCGACGGCGACGACAGCCAGGTAATAGCCTGG
AACGCCCATCTGGGCTACACGCCGTACGGACCGTACGACTTTTGCTTCGACCACCTGTCCATGGACCAAGTCATG
AAGCACGAGGCCGATTCCGGCCGGACGCCGCAGATCCTCGAGATCATGGCCCGTATGAAGCCGGATCTGGCCAAC
TCAGACAAGGTGCCGGTGCTGCTAACGGGCGACATGAACGCGCCCTCTCACCTGGACTGGACCGAGGCGACGCGA
GGCCAGCACTGTAACGTCGGAGCGGTGGCGTGGCCCAGCTCCGAGGAGCCCATCAAGGGCGGGCTGGTCGACTCG
TATCGCGAGGTGCACAAGGACCCGGTGGCGGATCCGGGCATCACCTGGTCTCCCATCTATCTCGACAACGAGGGC
CGGCCCGAGCCTTTGGACCGCATCGACTTTGTCTATCACAAGGGCTTGGATGTGGTCGATTCGGTTCACGAGGTG
GTGGGACAGCCTCAGGCGGAGCCGAACCACAAGGACAACGAGTGGACGTCGGATCACGCGGCGGTGCGGTCGACA
TTTCAGGTGCCGGCCAAGCAGAAGAAGCGGGGCGTTGAGCGAGAGGCGTTGAGGTTTAAAAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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