Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2450
Gene name
Locationscaffold_202:29585..30872
Strand+
Gene length (bp)1287
Transcript length (bp)1233
Coding sequence length (bp)1230
Protein length (aa) 410

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00314 Thaumatin Thaumatin family 3.0E-66 61 327

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 57 327 2.0E-36
sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 49 327 5.0E-29
sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 57 327 3.0E-28
sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 57 330 1.0E-26
sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 57 327 1.0E-25
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Swissprot ID Swissprot Description Start End E-value
sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 57 327 2.0E-36
sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 49 327 5.0E-29
sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 57 327 3.0E-28
sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 57 330 1.0E-26
sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 57 327 1.0E-25
sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 49 327 3.0E-24
sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 49 327 4.0E-24
sp|P32937|PR1A_HORVU Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1 59 168 5.0E-24
sp|P32938|PR1C_HORVU Pathogenesis-related protein 1C OS=Hordeum vulgare PE=2 SV=1 59 168 6.0E-24
sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 66 327 2.0E-23
sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 57 327 2.0E-22
sp|P27357|TLP_WHEAT Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1 59 168 5.0E-22
sp|P81295|PRR3_JUNAS Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1 55 327 4.0E-21
sp|P31110|TLP_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os12g0628600 PE=1 SV=1 49 171 1.0E-18
sp|P33679|ZEAM_MAIZE Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2 57 327 1.0E-18
sp|P14170|OSMO_TOBAC Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2 57 331 2.0E-18
sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 55 170 2.0E-18
sp|P50701|OS13_SOLCO Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1 57 329 1.0E-17
sp|Q01591|TPM1_SOLLC Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1 59 329 1.0E-17
sp|P50697|RST3_AVESA Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1 59 168 1.0E-17
sp|P50696|RST2_AVESA Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1 59 168 1.0E-17
sp|P50695|RST1_AVESA Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1 59 168 4.0E-17
sp|P13867|IAAT_MAIZE Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1 57 327 5.0E-17
sp|Q41350|OLP1_SOLLC Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1 57 170 2.0E-16
sp|P50700|OSL3_ARATH Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2 59 330 2.0E-15
sp|P25096|P21_SOYBN Protein P21 OS=Glycine max PE=1 SV=1 59 171 7.0E-15
sp|P07052|PRR2_TOBAC Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1 59 168 2.0E-13
sp|P25871|OLPA_TOBAC Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1 59 342 3.0E-13
sp|P50698|RST4_AVESA Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1 59 171 4.0E-13
sp|G5DC91|TLP1_MANZA Thaumatin-like protein 1 OS=Manilkara zapota GN=TLP1 PE=1 SV=2 59 171 9.0E-13
sp|P13046|PRR1_TOBAC Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1 59 168 5.0E-12
sp|P02883|THM1_THADA Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1 59 327 1.0E-11
sp|P02884|THM2_THADA Thaumatin-2 OS=Thaumatococcus daniellii PE=1 SV=1 59 327 1.0E-11
sp|E3SU11|ALL13_OLEEU Thaumatin-like protein OS=Olea europaea PE=1 SV=1 59 171 2.0E-11
sp|P50703|OS35_SOLCO Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1 51 171 1.0E-10
sp|P50702|OS81_SOLCO Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1 57 171 4.0E-10
sp|P12670|NP24_SOLLC Protein NP24 OS=Solanum lycopersicum PE=1 SV=2 59 171 1.0E-09
sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 251 311 2.0E-09
sp|P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2 59 168 6.0E-09
sp|Q9LD79|PRR3_JUNVI Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2 55 144 8.0E-07
sp|P81370|TLP_ACTDE Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2 261 327 5.0E-06
sp|Q41350|OLP1_SOLLC Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1 261 308 7.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2450
MNRLLLVAVTLGSLIPDTKAGEFRTVRRQRPIDPRPPRHGPPAKRGPPGGSDAKVPLIVTNNCDTTIWPGIATQS
GTGPGTGGFELLPGQNRTLWVAADWQGRVWGRTNCTVNGNSCACTTGDCFAKLDYEFSGAPPATLAEFNLAGGVE
GMQTFYDISLVDGYNLPLGIAYIPAKNTTYIPPNLTNCACIATAGWLYATAPNGTFYANASFPVPLEANETNESV
SGWCPWPNLAFPPTEPGSGVYPYPDDRVQRPAFSPCKSACATTGSDKDCCIGKYHDPNICKPSRYSTSVKAVCPD
AYSFAFDDQQSTFIVPKGGGWEIVLCPAGRSTNILRKLGKELFELASGGRLSDQSIKRLRDASFLEMDMDIETEM
EMGLESVVSGGGLARRPVLMATATATALASGWLLA
Coding >Ophio5|2450
ATGAATCGCCTTCTCCTCGTCGCTGTCACGCTCGGATCCTTGATACCCGACACCAAAGCAGGCGAGTTTCGTACC
GTCCGTCGCCAACGACCGATCGATCCCAGACCTCCCAGACACGGTCCGCCGGCAAAGCGAGGACCCCCCGGAGGC
TCCGACGCAAAAGTCCCGCTCATCGTGACCAACAACTGCGACACGACGATATGGCCTGGCATCGCCACCCAGTCT
GGCACCGGCCCGGGCACCGGCGGCTTTGAGCTGCTGCCGGGCCAGAACCGGACGCTATGGGTTGCGGCCGACTGG
CAGGGTCGTGTCTGGGGCCGGACGAACTGCACGGTCAATGGCAACTCTTGTGCCTGCACAACGGGTGACTGCTTC
GCCAAACTGGACTACGAGTTCAGCGGCGCTCCGCCGGCGACGCTTGCCGAGTTCAACCTGGCAGGCGGCGTCGAG
GGCATGCAGACCTTTTACGACATCTCCTTGGTCGACGGCTACAACTTGCCGCTGGGCATCGCCTACATACCGGCC
AAGAACACGACGTACATCCCGCCCAATCTGACGAATTGCGCCTGCATCGCCACGGCCGGCTGGCTGTACGCCACG
GCTCCCAACGGCACCTTTTACGCCAACGCCTCGTTCCCCGTCCCCCTCGAGGCCAATGAGACAAACGAGAGCGTC
AGCGGATGGTGTCCCTGGCCGAACCTCGCCTTCCCCCCGACGGAGCCTGGCAGCGGCGTCTACCCCTATCCAGAC
GACAGGGTGCAGAGGCCAGCCTTTTCCCCCTGCAAAAGCGCGTGCGCGACGACGGGCTCGGACAAGGACTGCTGC
ATCGGCAAGTATCACGACCCCAACATCTGCAAGCCGTCGCGGTACAGCACGTCGGTCAAGGCGGTGTGTCCCGAC
GCCTACAGCTTTGCCTTTGACGACCAGCAGTCGACCTTTATCGTGCCCAAGGGCGGCGGCTGGGAGATTGTCTTG
TGCCCGGCCGGGCGCTCGACCAACATCTTGCGCAAGCTGGGAAAGGAGCTGTTTGAGCTCGCCAGCGGCGGGAGG
TTGTCGGACCAGTCCATCAAGCGGCTGAGGGACGCGTCCTTTTTAGAGATGGATATGGATATCGAGACGGAGATG
GAGATGGGACTGGAATCGGTCGTCTCGGGGGGCGGACTGGCGCGAAGGCCGGTGCTGATGGCGACGGCGACGGCG
ACGGCTCTCGCCTCGGGCTGGCTTTTGGCT
Transcript >Ophio5|2450
ATGAATCGCCTTCTCCTCGTCGCTGTCACGCTCGGATCCTTGATACCCGACACCAAAGCAGGCGAGTTTCGTACC
GTCCGTCGCCAACGACCGATCGATCCCAGACCTCCCAGACACGGTCCGCCGGCAAAGCGAGGACCCCCCGGAGGC
TCCGACGCAAAAGTCCCGCTCATCGTGACCAACAACTGCGACACGACGATATGGCCTGGCATCGCCACCCAGTCT
GGCACCGGCCCGGGCACCGGCGGCTTTGAGCTGCTGCCGGGCCAGAACCGGACGCTATGGGTTGCGGCCGACTGG
CAGGGTCGTGTCTGGGGCCGGACGAACTGCACGGTCAATGGCAACTCTTGTGCCTGCACAACGGGTGACTGCTTC
GCCAAACTGGACTACGAGTTCAGCGGCGCTCCGCCGGCGACGCTTGCCGAGTTCAACCTGGCAGGCGGCGTCGAG
GGCATGCAGACCTTTTACGACATCTCCTTGGTCGACGGCTACAACTTGCCGCTGGGCATCGCCTACATACCGGCC
AAGAACACGACGTACATCCCGCCCAATCTGACGAATTGCGCCTGCATCGCCACGGCCGGCTGGCTGTACGCCACG
GCTCCCAACGGCACCTTTTACGCCAACGCCTCGTTCCCCGTCCCCCTCGAGGCCAATGAGACAAACGAGAGCGTC
AGCGGATGGTGTCCCTGGCCGAACCTCGCCTTCCCCCCGACGGAGCCTGGCAGCGGCGTCTACCCCTATCCAGAC
GACAGGGTGCAGAGGCCAGCCTTTTCCCCCTGCAAAAGCGCGTGCGCGACGACGGGCTCGGACAAGGACTGCTGC
ATCGGCAAGTATCACGACCCCAACATCTGCAAGCCGTCGCGGTACAGCACGTCGGTCAAGGCGGTGTGTCCCGAC
GCCTACAGCTTTGCCTTTGACGACCAGCAGTCGACCTTTATCGTGCCCAAGGGCGGCGGCTGGGAGATTGTCTTG
TGCCCGGCCGGGCGCTCGACCAACATCTTGCGCAAGCTGGGAAAGGAGCTGTTTGAGCTCGCCAGCGGCGGGAGG
TTGTCGGACCAGTCCATCAAGCGGCTGAGGGACGCGTCCTTTTTAGAGATGGATATGGATATCGAGACGGAGATG
GAGATGGGACTGGAATCGGTCGTCTCGGGGGGCGGACTGGCGCGAAGGCCGGTGCTGATGGCGACGGCGACGGCG
ACGGCTCTCGCCTCGGGCTGGCTTTTGGCTTGA
Gene >Ophio5|2450
ATGAATCGCCTTCTCCTCGTCGCTGTCACGCTCGGATCCTTGATACCCGACACCAAAGCAGGCGAGTTTCGTACC
GTCCGTCGCCAACGACCGATCGATCCCAGACCTCCCAGACACGGTCCGCCGGCAAAGCGAGGACCCCCCGGAGGC
TCCGACGCAAAAGTCCCGCTCATCGTGACCAACAACTGCGACACGACGATATGGCCTGGCATCGCCACCCAGTCT
GGCACCGGCCCGGGCACCGGCGGCTTTGAGCTGCTGCCGGGCCAGAACCGGACGCTATGGGTTGCGGCCGACTGG
CAGGGTCGTGTCTGGGGCCGGACGAACTGCACGGTCAATGGCAACTCTTGTGCCTGCACAACGGGTGACTGCTTC
GCCAAACTGGACTACGAGTTCAGCGTAGGTGACAATGGATTTTCCCTCCGGCCGCTGCGGCTAACCAAGCATCGA
CAGGGCGCTCCGCCGGCGACGCTTGCCGAGTTCAACCTGGCAGGCGGCGTCGAGGGCATGCAGACCTTTTACGAC
ATCTCCTTGGTCGACGGCTACAACTTGCCGCTGGGCATCGCCTACATACCGGCCAAGAACACGACGTACATCCCG
CCCAATCTGACGAATTGCGCCTGCATCGCCACGGCCGGCTGGCTGTACGCCACGGCTCCCAACGGCACCTTTTAC
GCCAACGCCTCGTTCCCCGTCCCCCTCGAGGCCAATGAGACAAACGAGAGCGTCAGCGGATGGTGTCCCTGGCCG
AACCTCGCCTTCCCCCCGACGGAGCCTGGCAGCGGCGTCTACCCCTATCCAGACGACAGGGTGCAGAGGCCAGCC
TTTTCCCCCTGCAAAAGCGCGTGCGCGACGACGGGCTCGGACAAGGACTGCTGCATCGGCAAGTATCACGACCCC
AACATCTGCAAGCCGTCGCGGTACAGCACGTCGGTCAAGGCGGTGTGTCCCGACGCCTACAGCTTTGCCTTTGAC
GACCAGCAGTCGACCTTTATCGTGCCCAAGGGCGGCGGCTGGGAGATTGTCTTGTGCCCGGCCGGGCGCTCGACC
AACATCTTGCGCAAGCTGGGAAAGGAGCTGTTTGAGCTCGCCAGCGGCGGGAGGTTGTCGGACCAGTCCATCAAG
CGGCTGAGGGACGCGTCCTTTTTAGAGATGGATATGGATATCGAGACGGAGATGGAGATGGGACTGGAATCGGTC
GTCTCGGGGGGCGGACTGGCGCGAAGGCCGGTGCTGATGGCGACGGCGACGGCGACGGCTCTCGCCTCGGGCTGG
CTTTTGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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