Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2428
Gene name
Locationscaffold_201:9798..10521
Strand+
Gene length (bp)723
Transcript length (bp)723
Coding sequence length (bp)720
Protein length (aa) 240

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18457 PUD1_2 Up-Regulated in long-lived daf-2 5.8E-56 34 218

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2428
MQITNILCVLLAAVEVSSAAPSPLQRRFDWGTVKRTAKVTIQNNSPDRIKSVSLVHKYSNVYKHRAEWPVIERFK
SPDEGNETTVEYNTGPFTTGRDWWLLSFYSDDMKTQFVTDPNNFRGFVDSLEGIGQLTTVSVAGATAGMVGALAG
PVTSVAASTAAVVVAKETTDALFNEETTVGFKQHILRADDEGKMTVIVINPDYTVTFYSTGSPSRTVTSRRPAAI
EVKNERGDVVDEIKQ
Coding >Ophio5|2428
ATGCAAATCACCAACATTCTTTGTGTGCTCCTCGCAGCCGTCGAGGTCAGCAGCGCGGCGCCGTCACCACTCCAA
CGTCGATTCGACTGGGGCACGGTCAAACGGACGGCAAAAGTCACGATCCAAAACAACTCGCCCGACCGCATCAAG
TCGGTGTCACTGGTGCACAAGTACAGCAACGTCTATAAGCATAGGGCGGAGTGGCCGGTGATTGAGAGATTCAAA
AGCCCCGACGAGGGCAATGAAACGACGGTCGAATATAACACCGGCCCATTCACCACCGGCAGAGACTGGTGGCTT
CTGAGCTTCTACAGCGACGACATGAAGACGCAGTTCGTGACGGACCCCAACAACTTTCGGGGCTTCGTCGATTCC
CTCGAAGGCATCGGCCAGCTCACGACTGTTAGTGTGGCCGGTGCTACGGCGGGAATGGTGGGCGCCTTGGCCGGA
CCCGTCACCAGCGTCGCCGCCTCCACCGCTGCCGTCGTCGTGGCGAAAGAGACAACGGACGCGCTGTTCAACGAG
GAGACGACAGTCGGATTCAAGCAACATATCCTCCGGGCAGATGACGAGGGTAAGATGACCGTCATCGTCATCAAC
CCGGACTATACCGTCACCTTTTACTCCACCGGATCACCCTCCCGTACCGTCACGTCCAGAAGGCCTGCCGCTATC
GAGGTCAAGAACGAAAGAGGAGATGTGGTGGATGAGATTAAGCAA
Transcript >Ophio5|2428
ATGCAAATCACCAACATTCTTTGTGTGCTCCTCGCAGCCGTCGAGGTCAGCAGCGCGGCGCCGTCACCACTCCAA
CGTCGATTCGACTGGGGCACGGTCAAACGGACGGCAAAAGTCACGATCCAAAACAACTCGCCCGACCGCATCAAG
TCGGTGTCACTGGTGCACAAGTACAGCAACGTCTATAAGCATAGGGCGGAGTGGCCGGTGATTGAGAGATTCAAA
AGCCCCGACGAGGGCAATGAAACGACGGTCGAATATAACACCGGCCCATTCACCACCGGCAGAGACTGGTGGCTT
CTGAGCTTCTACAGCGACGACATGAAGACGCAGTTCGTGACGGACCCCAACAACTTTCGGGGCTTCGTCGATTCC
CTCGAAGGCATCGGCCAGCTCACGACTGTTAGTGTGGCCGGTGCTACGGCGGGAATGGTGGGCGCCTTGGCCGGA
CCCGTCACCAGCGTCGCCGCCTCCACCGCTGCCGTCGTCGTGGCGAAAGAGACAACGGACGCGCTGTTCAACGAG
GAGACGACAGTCGGATTCAAGCAACATATCCTCCGGGCAGATGACGAGGGTAAGATGACCGTCATCGTCATCAAC
CCGGACTATACCGTCACCTTTTACTCCACCGGATCACCCTCCCGTACCGTCACGTCCAGAAGGCCTGCCGCTATC
GAGGTCAAGAACGAAAGAGGAGATGTGGTGGATGAGATTAAGCAATGA
Gene >Ophio5|2428
ATGCAAATCACCAACATTCTTTGTGTGCTCCTCGCAGCCGTCGAGGTCAGCAGCGCGGCGCCGTCACCACTCCAA
CGTCGATTCGACTGGGGCACGGTCAAACGGACGGCAAAAGTCACGATCCAAAACAACTCGCCCGACCGCATCAAG
TCGGTGTCACTGGTGCACAAGTACAGCAACGTCTATAAGCATAGGGCGGAGTGGCCGGTGATTGAGAGATTCAAA
AGCCCCGACGAGGGCAATGAAACGACGGTCGAATATAACACCGGCCCATTCACCACCGGCAGAGACTGGTGGCTT
CTGAGCTTCTACAGCGACGACATGAAGACGCAGTTCGTGACGGACCCCAACAACTTTCGGGGCTTCGTCGATTCC
CTCGAAGGCATCGGCCAGCTCACGACTGTTAGTGTGGCCGGTGCTACGGCGGGAATGGTGGGCGCCTTGGCCGGA
CCCGTCACCAGCGTCGCCGCCTCCACCGCTGCCGTCGTCGTGGCGAAAGAGACAACGGACGCGCTGTTCAACGAG
GAGACGACAGTCGGATTCAAGCAACATATCCTCCGGGCAGATGACGAGGGTAAGATGACCGTCATCGTCATCAAC
CCGGACTATACCGTCACCTTTTACTCCACCGGATCACCCTCCCGTACCGTCACGTCCAGAAGGCCTGCCGCTATC
GAGGTCAAGAACGAAAGAGGAGATGTGGTGGATGAGATTAAGCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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