Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2421
Gene name
Location	scaffold_200:27412..28255
Strand	+
Gene length (bp)	843
Transcript length (bp)	843
Coding sequence length (bp)	840
Protein length (aa)	280

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2421 MLPAAFLLAAIPAVMGTPPANASDASFPPANSERMRLTAMTKWFTLSAQPFIPGRPSKTVNNSIQVDFIRLVRGM KVTPYWKESTPCHYPLVLEAINQTPLEKQRRPNATSSDAAGKGKKRNEDRPTNNTAVAQRNGSAIATPFYLHPIQ KQIYADINSSSHVALVKTNPPPGVGPQVVELVCDPVYEGVAFKKIIFGAKGPELDNQPGVFFACPSPAPKSLSSE APPIYLQWSTTGPPLGRSCVPLRMIAEKAPNPQDRSKDWSMACDYITVDGECKIH
Coding	>Ophio5\|2421 ATGTTGCCAGCAGCTTTTCTCCTGGCCGCCATTCCGGCGGTCATGGGCACTCCGCCGGCTAATGCTTCGGATGCG AGCTTTCCGCCGGCTAATTCTGAGCGCATGCGCCTCACTGCCATGACTAAATGGTTCACTCTGTCCGCCCAACCG TTTATTCCGGGACGTCCTTCAAAGACCGTCAACAACTCGATTCAAGTCGACTTCATTCGTCTCGTCCGGGGCATG AAAGTCACTCCCTATTGGAAAGAAAGCACCCCGTGCCATTATCCCCTCGTCCTAGAGGCCATCAACCAGACGCCA CTTGAAAAACAACGTCGCCCAAACGCGACCTCCTCAGACGCGGCGGGCAAGGGGAAAAAACGCAACGAAGACCGC CCGACCAATAACACGGCAGTAGCCCAGAGGAATGGGTCGGCCATTGCAACCCCCTTTTACCTCCATCCGATCCAG AAACAAATCTACGCCGATATAAACTCGTCATCGCACGTTGCTCTGGTGAAGACGAATCCGCCGCCTGGGGTAGGC CCACAAGTCGTGGAGCTCGTATGCGATCCTGTATATGAGGGAGTCGCGTTCAAGAAAATCATCTTTGGAGCCAAG GGTCCGGAATTAGATAACCAGCCTGGGGTCTTCTTCGCCTGTCCGTCGCCTGCGCCGAAGTCTCTGTCGTCTGAG GCTCCCCCGATTTATCTTCAGTGGTCCACTACAGGGCCTCCTCTGGGACGGAGTTGTGTCCCGCTGAGGATGATT GCTGAGAAGGCACCAAATCCCCAGGACCGGTCCAAGGACTGGTCGATGGCATGCGACTACATCACAGTTGATGGA GAGTGTAAGATTCAT
Transcript	>Ophio5\|2421 ATGTTGCCAGCAGCTTTTCTCCTGGCCGCCATTCCGGCGGTCATGGGCACTCCGCCGGCTAATGCTTCGGATGCG AGCTTTCCGCCGGCTAATTCTGAGCGCATGCGCCTCACTGCCATGACTAAATGGTTCACTCTGTCCGCCCAACCG TTTATTCCGGGACGTCCTTCAAAGACCGTCAACAACTCGATTCAAGTCGACTTCATTCGTCTCGTCCGGGGCATG AAAGTCACTCCCTATTGGAAAGAAAGCACCCCGTGCCATTATCCCCTCGTCCTAGAGGCCATCAACCAGACGCCA CTTGAAAAACAACGTCGCCCAAACGCGACCTCCTCAGACGCGGCGGGCAAGGGGAAAAAACGCAACGAAGACCGC CCGACCAATAACACGGCAGTAGCCCAGAGGAATGGGTCGGCCATTGCAACCCCCTTTTACCTCCATCCGATCCAG AAACAAATCTACGCCGATATAAACTCGTCATCGCACGTTGCTCTGGTGAAGACGAATCCGCCGCCTGGGGTAGGC CCACAAGTCGTGGAGCTCGTATGCGATCCTGTATATGAGGGAGTCGCGTTCAAGAAAATCATCTTTGGAGCCAAG GGTCCGGAATTAGATAACCAGCCTGGGGTCTTCTTCGCCTGTCCGTCGCCTGCGCCGAAGTCTCTGTCGTCTGAG GCTCCCCCGATTTATCTTCAGTGGTCCACTACAGGGCCTCCTCTGGGACGGAGTTGTGTCCCGCTGAGGATGATT GCTGAGAAGGCACCAAATCCCCAGGACCGGTCCAAGGACTGGTCGATGGCATGCGACTACATCACAGTTGATGGA GAGTGTAAGATTCATTAG
Gene	>Ophio5\|2421 ATGTTGCCAGCAGCTTTTCTCCTGGCCGCCATTCCGGCGGTCATGGGCACTCCGCCGGCTAATGCTTCGGATGCG AGCTTTCCGCCGGCTAATTCTGAGCGCATGCGCCTCACTGCCATGACTAAATGGTTCACTCTGTCCGCCCAACCG TTTATTCCGGGACGTCCTTCAAAGACCGTCAACAACTCGATTCAAGTCGACTTCATTCGTCTCGTCCGGGGCATG AAAGTCACTCCCTATTGGAAAGAAAGCACCCCGTGCCATTATCCCCTCGTCCTAGAGGCCATCAACCAGACGCCA CTTGAAAAACAACGTCGCCCAAACGCGACCTCCTCAGACGCGGCGGGCAAGGGGAAAAAACGCAACGAAGACCGC CCGACCAATAACACGGCAGTAGCCCAGAGGAATGGGTCGGCCATTGCAACCCCCTTTTACCTCCATCCGATCCAG AAACAAATCTACGCCGATATAAACTCGTCATCGCACGTTGCTCTGGTGAAGACGAATCCGCCGCCTGGGGTAGGC CCACAAGTCGTGGAGCTCGTATGCGATCCTGTATATGAGGGAGTCGCGTTCAAGAAAATCATCTTTGGAGCCAAG GGTCCGGAATTAGATAACCAGCCTGGGGTCTTCTTCGCCTGTCCGTCGCCTGCGCCGAAGTCTCTGTCGTCTGAG GCTCCCCCGATTTATCTTCAGTGGTCCACTACAGGGCCTCCTCTGGGACGGAGTTGTGTCCCGCTGAGGATGATT GCTGAGAAGGCACCAAATCCCCAGGACCGGTCCAAGGACTGGTCGATGGCATGCGACTACATCACAGTTGATGGA GAGTGTAAGATTCATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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