Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2417
Gene name
Locationscaffold_200:13239..14004
Strand+
Gene length (bp)765
Transcript length (bp)765
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14040 DNase_NucA_NucB Deoxyribonuclease NucA/NucB 1.5E-07 30 123

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2417
MMLRKALPLALALPITASIAAEAAPPDITFLCQEMPDICTNMCWAVRCAKPTFSQQLTLDYPSDDLRRQRLESSG
CARCASNATVSARNDACNAYPFPDTSESVSSNASAVSRCVPREQQTKQDADVAILAKKFRQTGQRSFRINFGNPG
AAGVKYCLSEPCENDDREEQEEALQKRALAAPFRVFMTNSGMTVASMDDLGADYSFTRRVGAEEKLSPQAQMWQE
DFKGERYAFVTDSVVREMNAAEIRGKTGR
Coding >Ophio5|2417
ATGATGCTTCGAAAGGCTTTGCCCTTGGCCCTCGCCCTGCCCATCACGGCCTCGATAGCAGCCGAGGCGGCCCCT
CCGGACATCACCTTTCTCTGCCAAGAAATGCCCGACATCTGCACCAACATGTGTTGGGCCGTCCGCTGCGCGAAA
CCGACCTTCTCACAACAGTTAACGCTCGACTATCCATCCGACGACCTTCGTCGCCAACGTCTCGAATCGTCCGGC
TGCGCTCGTTGCGCCAGCAATGCTACCGTTTCCGCCCGGAATGACGCCTGCAACGCGTATCCGTTTCCCGACACG
AGCGAGAGCGTATCTTCCAACGCATCGGCCGTGTCCCGGTGCGTCCCTCGGGAACAGCAGACGAAGCAAGACGCC
GACGTTGCCATACTCGCCAAAAAGTTTCGCCAGACCGGCCAGCGAAGCTTCAGGATCAACTTTGGCAACCCCGGA
GCGGCGGGCGTTAAATACTGCCTCTCGGAGCCGTGTGAAAACGACGACCGGGAGGAGCAGGAGGAGGCTTTGCAG
AAGCGCGCTCTGGCGGCGCCCTTTAGAGTCTTTATGACTAATTCGGGCATGACTGTCGCTTCCATGGATGACCTG
GGTGCTGATTACAGCTTCACTCGCCGGGTTGGCGCTGAGGAAAAGCTCTCACCGCAGGCTCAGATGTGGCAGGAG
GATTTCAAGGGCGAGCGCTATGCCTTTGTAACGGACTCTGTTGTGAGGGAGATGAATGCAGCCGAAATTCGCGGC
AAGACTGGCAGA
Transcript >Ophio5|2417
ATGATGCTTCGAAAGGCTTTGCCCTTGGCCCTCGCCCTGCCCATCACGGCCTCGATAGCAGCCGAGGCGGCCCCT
CCGGACATCACCTTTCTCTGCCAAGAAATGCCCGACATCTGCACCAACATGTGTTGGGCCGTCCGCTGCGCGAAA
CCGACCTTCTCACAACAGTTAACGCTCGACTATCCATCCGACGACCTTCGTCGCCAACGTCTCGAATCGTCCGGC
TGCGCTCGTTGCGCCAGCAATGCTACCGTTTCCGCCCGGAATGACGCCTGCAACGCGTATCCGTTTCCCGACACG
AGCGAGAGCGTATCTTCCAACGCATCGGCCGTGTCCCGGTGCGTCCCTCGGGAACAGCAGACGAAGCAAGACGCC
GACGTTGCCATACTCGCCAAAAAGTTTCGCCAGACCGGCCAGCGAAGCTTCAGGATCAACTTTGGCAACCCCGGA
GCGGCGGGCGTTAAATACTGCCTCTCGGAGCCGTGTGAAAACGACGACCGGGAGGAGCAGGAGGAGGCTTTGCAG
AAGCGCGCTCTGGCGGCGCCCTTTAGAGTCTTTATGACTAATTCGGGCATGACTGTCGCTTCCATGGATGACCTG
GGTGCTGATTACAGCTTCACTCGCCGGGTTGGCGCTGAGGAAAAGCTCTCACCGCAGGCTCAGATGTGGCAGGAG
GATTTCAAGGGCGAGCGCTATGCCTTTGTAACGGACTCTGTTGTGAGGGAGATGAATGCAGCCGAAATTCGCGGC
AAGACTGGCAGATAG
Gene >Ophio5|2417
ATGATGCTTCGAAAGGCTTTGCCCTTGGCCCTCGCCCTGCCCATCACGGCCTCGATAGCAGCCGAGGCGGCCCCT
CCGGACATCACCTTTCTCTGCCAAGAAATGCCCGACATCTGCACCAACATGTGTTGGGCCGTCCGCTGCGCGAAA
CCGACCTTCTCACAACAGTTAACGCTCGACTATCCATCCGACGACCTTCGTCGCCAACGTCTCGAATCGTCCGGC
TGCGCTCGTTGCGCCAGCAATGCTACCGTTTCCGCCCGGAATGACGCCTGCAACGCGTATCCGTTTCCCGACACG
AGCGAGAGCGTATCTTCCAACGCATCGGCCGTGTCCCGGTGCGTCCCTCGGGAACAGCAGACGAAGCAAGACGCC
GACGTTGCCATACTCGCCAAAAAGTTTCGCCAGACCGGCCAGCGAAGCTTCAGGATCAACTTTGGCAACCCCGGA
GCGGCGGGCGTTAAATACTGCCTCTCGGAGCCGTGTGAAAACGACGACCGGGAGGAGCAGGAGGAGGCTTTGCAG
AAGCGCGCTCTGGCGGCGCCCTTTAGAGTCTTTATGACTAATTCGGGCATGACTGTCGCTTCCATGGATGACCTG
GGTGCTGATTACAGCTTCACTCGCCGGGTTGGCGCTGAGGAAAAGCTCTCACCGCAGGCTCAGATGTGGCAGGAG
GATTTCAAGGGCGAGCGCTATGCCTTTGTAACGGACTCTGTTGTGAGGGAGATGAATGCAGCCGAAATTCGCGGC
AAGACTGGCAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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