Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2415
Gene name
Locationscaffold_200:9451..10970
Strand+
Gene length (bp)1519
Transcript length (bp)1449
Coding sequence length (bp)1446
Protein length (aa) 482

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00190 Cupin_1 Cupin 4.8E-18 142 270
PF00190 Cupin_1 Cupin 8.4E-17 326 429
PF07883 Cupin_2 Cupin domain 2.4E-08 167 238
PF07883 Cupin_2 Cupin domain 7.3E-12 348 421

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O34767|OXDD_BACSU Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 87 463 6.0E-109
sp|O34714|OXDC_BACSU Oxalate decarboxylase OxdC OS=Bacillus subtilis (strain 168) GN=oxdC PE=1 SV=1 87 462 7.0E-108
sp|D4AKL6|OXDD_ARTBC Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 85 465 2.0E-82
sp|D4B179|OXDC_ARTBC Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 111 465 1.0E-79
sp|O34767|OXDD_BACSU Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 327 470 1.0E-13
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O34767|OXDD_BACSU Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 87 463 6.0E-109
sp|O34714|OXDC_BACSU Oxalate decarboxylase OxdC OS=Bacillus subtilis (strain 168) GN=oxdC PE=1 SV=1 87 462 7.0E-108
sp|D4AKL6|OXDD_ARTBC Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 85 465 2.0E-82
sp|D4B179|OXDC_ARTBC Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1 111 465 1.0E-79
sp|O34767|OXDD_BACSU Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1 327 470 1.0E-13
sp|D4AKL6|OXDD_ARTBC Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1 307 481 1.0E-05
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2415
MLASAAPQMTYEENVGPVAGVNPPVPPVASPIGSLYGPSSLQGGIAPPAKIETAAGATVSEQPQLVNGQDAPADL
GLYLDMQSAPRPEAVRGAFGAASDNGPRTFAYERLNPDLFAPPGTDKGTVPNAVWPLGLSHNRPGAAGRAGWARQ
QNTAVLPSAKRMAGVDMKLAPNAYRELHWHTAGEWALLLEGCAHIAAVDDESAAFADDVCAGDVWFFPAGVPHSI
QAGDKGVEFLLVFDQGDFDENGTFLVSDMFARTPREVLSKNFRADVDAFKNLPQSKELYIFNGTPQPNADESLAD
SAPGGRLVGSKAYSYHWSQQEPLRVPGGSVKVLDPRTFPIAPMFSAALVTVEPGAMREMHWHTTSDEWDYFLQGS
GRATIYKAPDTANTFDFTAGDVGYIPQAAAHYVENTGTDDLVFLEVLQAPKFSDISVAQWLALTPKQTVIDHLHL
PEDLVDSLPKEKTILKTGNTNLTALAGGGTAY
Coding >Ophio5|2415
ATGCTAGCTTCCGCGGCACCACAAATGACGTACGAAGAGAACGTCGGTCCCGTGGCCGGTGTAAACCCTCCGGTA
CCGCCCGTGGCATCCCCCATCGGCAGCCTTTACGGTCCCAGCTCCCTCCAAGGCGGCATCGCGCCTCCAGCAAAG
ATAGAAACAGCAGCTGGAGCGACGGTATCCGAACAGCCACAGCTAGTCAACGGCCAAGACGCCCCTGCCGACCTC
GGCCTATATCTCGATATGCAATCAGCGCCTCGTCCGGAGGCAGTTCGTGGCGCATTTGGCGCAGCGTCAGATAAT
GGCCCACGCACATTCGCCTACGAGCGTCTCAACCCAGATCTCTTCGCACCCCCCGGCACGGACAAAGGGACGGTC
CCGAACGCGGTCTGGCCCCTGGGCCTCTCTCATAATCGACCCGGTGCCGCCGGACGCGCCGGCTGGGCGAGACAG
CAGAATACGGCGGTGCTGCCGAGCGCCAAACGCATGGCCGGAGTGGACATGAAGCTTGCTCCGAATGCCTATCGC
GAACTGCATTGGCACACGGCTGGCGAGTGGGCTCTCCTGCTCGAGGGCTGCGCTCACATTGCTGCCGTCGACGAT
GAGAGCGCTGCCTTTGCGGATGATGTCTGCGCCGGCGACGTCTGGTTCTTCCCCGCAGGCGTACCGCATTCCATC
CAAGCTGGTGACAAGGGCGTCGAATTCCTCCTCGTCTTTGATCAAGGCGACTTTGACGAGAACGGCACCTTTCTC
GTATCCGACATGTTCGCCCGCACCCCACGCGAGGTTCTATCCAAGAACTTCCGCGCCGACGTCGACGCATTCAAG
AACCTCCCTCAATCAAAGGAACTGTACATCTTCAACGGCACGCCCCAACCAAATGCCGACGAGTCCTTGGCCGAC
TCTGCGCCAGGGGGGCGCCTCGTCGGCAGCAAGGCTTATTCCTATCACTGGTCGCAGCAGGAACCGTTACGCGTC
CCCGGCGGATCCGTAAAGGTGCTCGATCCGAGGACCTTTCCCATCGCCCCCATGTTTTCGGCTGCCTTGGTGACG
GTTGAGCCCGGCGCGATGCGTGAAATGCACTGGCATACCACTTCGGATGAGTGGGATTACTTCCTTCAGGGCTCT
GGCCGTGCCACCATCTACAAGGCGCCTGATACCGCCAACACGTTTGACTTTACCGCCGGCGATGTTGGCTATATC
CCACAGGCTGCTGCTCACTACGTCGAGAACACGGGCACCGACGACCTTGTCTTCCTCGAGGTCTTGCAAGCGCCC
AAGTTTTCAGACATCTCTGTTGCCCAGTGGCTGGCATTGACGCCCAAGCAGACTGTCATCGACCATCTGCATCTG
CCGGAGGACCTCGTCGATAGCCTACCCAAGGAGAAGACTATCCTCAAGACGGGCAACACCAATCTGACGGCTCTG
GCTGGCGGCGGCACGGCCTAC
Transcript >Ophio5|2415
ATGCTAGCTTCCGCGGCACCACAAATGACGTACGAAGAGAACGTCGGTCCCGTGGCCGGTGTAAACCCTCCGGTA
CCGCCCGTGGCATCCCCCATCGGCAGCCTTTACGGTCCCAGCTCCCTCCAAGGCGGCATCGCGCCTCCAGCAAAG
ATAGAAACAGCAGCTGGAGCGACGGTATCCGAACAGCCACAGCTAGTCAACGGCCAAGACGCCCCTGCCGACCTC
GGCCTATATCTCGATATGCAATCAGCGCCTCGTCCGGAGGCAGTTCGTGGCGCATTTGGCGCAGCGTCAGATAAT
GGCCCACGCACATTCGCCTACGAGCGTCTCAACCCAGATCTCTTCGCACCCCCCGGCACGGACAAAGGGACGGTC
CCGAACGCGGTCTGGCCCCTGGGCCTCTCTCATAATCGACCCGGTGCCGCCGGACGCGCCGGCTGGGCGAGACAG
CAGAATACGGCGGTGCTGCCGAGCGCCAAACGCATGGCCGGAGTGGACATGAAGCTTGCTCCGAATGCCTATCGC
GAACTGCATTGGCACACGGCTGGCGAGTGGGCTCTCCTGCTCGAGGGCTGCGCTCACATTGCTGCCGTCGACGAT
GAGAGCGCTGCCTTTGCGGATGATGTCTGCGCCGGCGACGTCTGGTTCTTCCCCGCAGGCGTACCGCATTCCATC
CAAGCTGGTGACAAGGGCGTCGAATTCCTCCTCGTCTTTGATCAAGGCGACTTTGACGAGAACGGCACCTTTCTC
GTATCCGACATGTTCGCCCGCACCCCACGCGAGGTTCTATCCAAGAACTTCCGCGCCGACGTCGACGCATTCAAG
AACCTCCCTCAATCAAAGGAACTGTACATCTTCAACGGCACGCCCCAACCAAATGCCGACGAGTCCTTGGCCGAC
TCTGCGCCAGGGGGGCGCCTCGTCGGCAGCAAGGCTTATTCCTATCACTGGTCGCAGCAGGAACCGTTACGCGTC
CCCGGCGGATCCGTAAAGGTGCTCGATCCGAGGACCTTTCCCATCGCCCCCATGTTTTCGGCTGCCTTGGTGACG
GTTGAGCCCGGCGCGATGCGTGAAATGCACTGGCATACCACTTCGGATGAGTGGGATTACTTCCTTCAGGGCTCT
GGCCGTGCCACCATCTACAAGGCGCCTGATACCGCCAACACGTTTGACTTTACCGCCGGCGATGTTGGCTATATC
CCACAGGCTGCTGCTCACTACGTCGAGAACACGGGCACCGACGACCTTGTCTTCCTCGAGGTCTTGCAAGCGCCC
AAGTTTTCAGACATCTCTGTTGCCCAGTGGCTGGCATTGACGCCCAAGCAGACTGTCATCGACCATCTGCATCTG
CCGGAGGACCTCGTCGATAGCCTACCCAAGGAGAAGACTATCCTCAAGACGGGCAACACCAATCTGACGGCTCTG
GCTGGCGGCGGCACGGCCTACTAA
Gene >Ophio5|2415
ATGCTAGCTTCCGCGGCACCACAGTGAGTCGCCATGGCTTCTTCTCTCATCCACGTCGACTACTGACTGACTCCT
TTCCTCCCTCTTCTGCAGAATGACGTACGAAGAGAACGTCGGTCCCGTGGCCGGTGTAAACCCTCCGGTACCGCC
CGTGGCATCCCCCATCGGCAGCCTTTACGGTCCCAGCTCCCTCCAAGGCGGCATCGCGCCTCCAGCAAAGATAGA
AACAGCAGCTGGAGCGACGGTATCCGAACAGCCACAGCTAGTCAACGGCCAAGACGCCCCTGCCGACCTCGGCCT
ATATCTCGATATGCAATCAGCGCCTCGTCCGGAGGCAGTTCGTGGCGCATTTGGCGCAGCGTCAGATAATGGCCC
ACGCACATTCGCCTACGAGCGTCTCAACCCAGATCTCTTCGCACCCCCCGGCACGGACAAAGGGACGGTCCCGAA
CGCGGTCTGGCCCCTGGGCCTCTCTCATAATCGACCCGGTGCCGCCGGACGCGCCGGCTGGGCGAGACAGCAGAA
TACGGCGGTGCTGCCGAGCGCCAAACGCATGGCCGGAGTGGACATGAAGCTTGCTCCGAATGCCTATCGCGAACT
GCATTGGCACACGGCTGGCGAGTGGGCTCTCCTGCTCGAGGGCTGCGCTCACATTGCTGCCGTCGACGATGAGAG
CGCTGCCTTTGCGGATGATGTCTGCGCCGGCGACGTCTGGTTCTTCCCCGCAGGCGTACCGCATTCCATCCAAGC
TGGTGACAAGGGCGTCGAATTCCTCCTCGTCTTTGATCAAGGCGACTTTGACGAGAACGGCACCTTTCTCGTATC
CGACATGTTCGCCCGCACCCCACGCGAGGTTCTATCCAAGAACTTCCGCGCCGACGTCGACGCATTCAAGAACCT
CCCTCAATCAAAGGAACTGTACATCTTCAACGGCACGCCCCAACCAAATGCCGACGAGTCCTTGGCCGACTCTGC
GCCAGGGGGGCGCCTCGTCGGCAGCAAGGCTTATTCCTATCACTGGTCGCAGCAGGAACCGTTACGCGTCCCCGG
CGGATCCGTAAAGGTGCTCGATCCGAGGACCTTTCCCATCGCCCCCATGTTTTCGGCTGCCTTGGTGACGGTTGA
GCCCGGCGCGATGCGTGAAATGCACTGGCATACCACTTCGGATGAGTGGGATTACTTCCTTCAGGGCTCTGGCCG
TGCCACCATCTACAAGGCGCCTGATACCGCCAACACGTTTGACTTTACCGCCGGCGATGTTGGCTATATCCCACA
GGCTGCTGCTCACTACGTCGAGAACACGGGCACCGACGACCTTGTCTTCCTCGAGGTCTTGCAAGCGCCCAAGTT
TTCAGACATCTCTGTTGCCCAGTGGCTGGCATTGACGCCCAAGCAGACTGTCATCGACCATCTGCATCTGCCGGA
GGACCTCGTCGATAGCCTACCCAAGGAGAAGACTATCCTCAAGACGGGCAACACCAATCTGACGGCTCTGGCTGG
CGGCGGCACGGCCTACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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