Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2394
Gene name
Locationscaffold_20:35553..36297
Strand-
Gene length (bp)744
Transcript length (bp)687
Coding sequence length (bp)684
Protein length (aa) 228

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2394
MVSTIGGIIIALLVLLAVSAVGWFVFAQLRARKLGLPPPGLSSYLPWRHNDDPYGPPRPAPGGVVGWFNDKLRRF
KDRNNRSAAGAYEQSLRDGGGRGRRGFGPLDPDEAWDARVGHEADGYGYYEEQELSGSVRGRSTNDYSGGGAYSV
NLGSVPSAGYEGEHRGRQPTRSPVGSRNPFDDEAGSSLRGLSPRPIDTSTPRKHRSKRDADSPGGSPIDRPSVFK
ENV
Coding >Ophio5|2394
ATGGTTTCTACCATCGGCGGAATCATCATCGCCCTGCTCGTGCTGCTCGCCGTCTCTGCCGTTGGCTGGTTCGTC
TTCGCCCAGCTGCGCGCCCGCAAACTCGGCCTCCCGCCTCCCGGCCTGTCGTCCTACCTACCCTGGCGTCACAAC
GACGACCCCTACGGCCCGCCGCGGCCTGCTCCCGGGGGCGTCGTTGGCTGGTTCAACGACAAACTTCGCCGCTTC
AAGGACCGCAACAACCGCTCCGCTGCCGGCGCCTACGAGCAGAGCTTACGTGACGGCGGTGGTCGTGGCCGTCGC
GGCTTTGGGCCCCTTGACCCTGACGAGGCCTGGGATGCGCGCGTCGGTCACGAGGCCGACGGCTATGGCTACTAT
GAGGAACAGGAGCTGAGCGGCTCCGTTCGCGGCCGCTCTACCAACGACTACAGCGGCGGAGGCGCATACTCCGTC
AACCTCGGTTCCGTTCCGTCTGCTGGTTACGAAGGCGAACACAGGGGCCGTCAGCCGACGCGTAGTCCTGTCGGG
TCGCGAAATCCGTTCGACGACGAGGCCGGATCGAGCCTTCGAGGTTTGAGTCCCAGGCCTATTGACACCTCGACC
CCTCGGAAGCACAGGTCCAAACGTGACGCCGATAGCCCTGGAGGCAGTCCCATCGACAGGCCGTCCGTCTTTAAA
GAAAACGTC
Transcript >Ophio5|2394
ATGGTTTCTACCATCGGCGGAATCATCATCGCCCTGCTCGTGCTGCTCGCCGTCTCTGCCGTTGGCTGGTTCGTC
TTCGCCCAGCTGCGCGCCCGCAAACTCGGCCTCCCGCCTCCCGGCCTGTCGTCCTACCTACCCTGGCGTCACAAC
GACGACCCCTACGGCCCGCCGCGGCCTGCTCCCGGGGGCGTCGTTGGCTGGTTCAACGACAAACTTCGCCGCTTC
AAGGACCGCAACAACCGCTCCGCTGCCGGCGCCTACGAGCAGAGCTTACGTGACGGCGGTGGTCGTGGCCGTCGC
GGCTTTGGGCCCCTTGACCCTGACGAGGCCTGGGATGCGCGCGTCGGTCACGAGGCCGACGGCTATGGCTACTAT
GAGGAACAGGAGCTGAGCGGCTCCGTTCGCGGCCGCTCTACCAACGACTACAGCGGCGGAGGCGCATACTCCGTC
AACCTCGGTTCCGTTCCGTCTGCTGGTTACGAAGGCGAACACAGGGGCCGTCAGCCGACGCGTAGTCCTGTCGGG
TCGCGAAATCCGTTCGACGACGAGGCCGGATCGAGCCTTCGAGGTTTGAGTCCCAGGCCTATTGACACCTCGACC
CCTCGGAAGCACAGGTCCAAACGTGACGCCGATAGCCCTGGAGGCAGTCCCATCGACAGGCCGTCCGTCTTTAAA
GAAAACGTCTGA
Gene >Ophio5|2394
ATGGTTTCTACCATCGGCGGAATCATCATCGCCCTGCTCGTGCTGCTCGCCGTCTCTGCCGTTGGCTGGTTCGTC
TTCGCCCAGCTGCGCGCCCGCAAACTCGGCGTGAGTTTTCGCCTACGTAACTGCGTCCAAATGCCTGCTGACTCT
CTCCGCCATAAGCTCCCGCCTCCCGGCCTGTCGTCCTACCTACCCTGGCGTCACAACGACGACCCCTACGGCCCG
CCGCGGCCTGCTCCCGGGGGCGTCGTTGGCTGGTTCAACGACAAACTTCGCCGCTTCAAGGACCGCAACAACCGC
TCCGCTGCCGGCGCCTACGAGCAGAGCTTACGTGACGGCGGTGGTCGTGGCCGTCGCGGCTTTGGGCCCCTTGAC
CCTGACGAGGCCTGGGATGCGCGCGTCGGTCACGAGGCCGACGGCTATGGCTACTATGAGGAACAGGAGCTGAGC
GGCTCCGTTCGCGGCCGCTCTACCAACGACTACAGCGGCGGAGGCGCATACTCCGTCAACCTCGGTTCCGTTCCG
TCTGCTGGTTACGAAGGCGAACACAGGGGCCGTCAGCCGACGCGTAGTCCTGTCGGGTCGCGAAATCCGTTCGAC
GACGAGGCCGGATCGAGCCTTCGAGGTTTGAGTCCCAGGCCTATTGACACCTCGACCCCTCGGAAGCACAGGTCC
AAACGTGACGCCGATAGCCCTGGAGGCAGTCCCATCGACAGGCCGTCCGTCTTTAAAGAAAACGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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