© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2373 |
| Gene name | |
| Location | scaffold_2:106183..108277 |
| Strand | - |
| Gene length (bp) | 2094 |
| Transcript length (bp) | 2040 |
| Coding sequence length (bp) | 2037 |
| Protein length (aa) | 679 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 1.5E-16 | 472 | 590 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D1C4U5|FTSH3_SPHTD | ATP-dependent zinc metalloprotease FtsH 3 OS=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) GN=ftsH3 PE=3 SV=1 | 420 | 660 | 2.0E-07 |
| sp|Q8SQK0|PRS8_ENCCU | 26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=2 | 454 | 604 | 2.0E-07 |
| sp|C7MC16|FTSH_BRAFD | ATP-dependent zinc metalloprotease FtsH OS=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) GN=ftsH PE=3 SV=1 | 472 | 663 | 6.0E-07 |
| sp|Q01939|PRS8_YEAST | 26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1 SV=4 | 453 | 604 | 2.0E-06 |
| sp|O18413|PRS8_DROME | 26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Rpt6 PE=1 SV=2 | 453 | 604 | 2.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D1C4U5|FTSH3_SPHTD | ATP-dependent zinc metalloprotease FtsH 3 OS=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) GN=ftsH3 PE=3 SV=1 | 420 | 660 | 2.0E-07 |
| sp|Q8SQK0|PRS8_ENCCU | 26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=2 | 454 | 604 | 2.0E-07 |
| sp|C7MC16|FTSH_BRAFD | ATP-dependent zinc metalloprotease FtsH OS=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) GN=ftsH PE=3 SV=1 | 472 | 663 | 6.0E-07 |
| sp|Q01939|PRS8_YEAST | 26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1 SV=4 | 453 | 604 | 2.0E-06 |
| sp|O18413|PRS8_DROME | 26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Rpt6 PE=1 SV=2 | 453 | 604 | 2.0E-06 |
| sp|P54814|PRS8_MANSE | 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1 | 453 | 604 | 3.0E-06 |
| sp|Q8BPY9|FIGL1_MOUSE | Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=1 SV=1 | 461 | 619 | 4.0E-06 |
| sp|Q6GX84|FIGL1_RAT | Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1 | 461 | 619 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016887 | ATP hydrolysis activity | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0043168 | anion binding | No |
| GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
| GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0016787 | hydrolase activity | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0016462 | pyrophosphatase activity | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0017111 | nucleoside-triphosphatase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2373 MSDVDHTRKSDDDGSNSAVVVSPVTEEKEKAMVGLLAESKELYAKLDQHRNRSWTDKKPDDFEEVSENEETAKYA IIVRKQKPEDADGRALVIHSLIIQSPYLKRVLADVLDGYPGILTDVARLKLWEPFECLVHRWDRLEDAVGDAALD GAAKDHLELLMDIMRQELGPVIQLRQDYFKNRAVAFEHAWTLFPPGCMVLGYKNGKPVAAKFRRGYYVDTPCGKM YALKCRIIDWDGSVMGWTDLDQQIPAFPGTMPFSSLPCHPLEYDEDVAGVKAMLMERGRRFEALAGYCYRSYRGV ALWHPEPRKTVRENVQSRIVVDGTNWEKENFDHQVEITPLYREEARGRRFSCVFRRRRSSFTSIGSPCSSPPPPG EGSGGGAEDGGSSRPPLTEEQLLVTSPMVRGYSLHNKRWMEFFVDDVGDVEFDEHAFSSLVLPGDKKELILAFAQ SQARYKDAFDDVISGKGKGIIVLLSGGPGIGKTLTAESVAEEMRVPLYAMSAGDLGSDAYDVENNLSRTLAMVAD WNAVLLLDECDVFLEARGPRDLERNRIVAIFLRTLEYYQGILFLTTNRVRDMDPAFASRVHVSLEYPPLDSNARA AVWRSFLARCVVDGKDTSLRGDAAHDVGDDDVDRLSELPLNGRVIKNVLKAANLLACHRGETLAMGHLRTVLKVE GHVV |
| Coding | >Ophio5|2373 ATGTCTGACGTCGATCATACGCGAAAGAGTGATGATGATGGCTCAAACTCGGCCGTCGTCGTCAGTCCCGTTACC GAGGAAAAGGAAAAGGCCATGGTCGGACTACTCGCCGAGAGCAAAGAGCTCTACGCCAAGCTCGACCAGCACCGA AACCGGTCCTGGACTGACAAGAAGCCGGACGACTTCGAGGAGGTGTCTGAGAACGAGGAGACAGCCAAGTACGCC ATTATCGTTCGAAAGCAGAAACCGGAGGACGCCGACGGCAGGGCCCTCGTGATTCATAGTCTCATCATCCAGTCA CCCTACCTGAAGCGCGTCCTTGCCGATGTACTCGATGGCTATCCCGGCATCTTGACCGATGTGGCACGCCTCAAG CTCTGGGAGCCCTTTGAGTGTCTCGTCCACCGCTGGGACCGGCTCGAGGATGCTGTCGGCGATGCGGCGCTCGAT GGCGCGGCCAAAGATCACCTCGAGCTGTTGATGGACATTATGCGCCAGGAGCTCGGCCCTGTCATTCAACTGCGC CAAGACTACTTCAAGAACAGGGCCGTCGCTTTCGAGCACGCCTGGACCCTGTTCCCCCCCGGCTGTATGGTCCTC GGCTACAAGAATGGGAAGCCAGTCGCGGCCAAGTTCCGGCGCGGGTACTACGTCGATACGCCCTGCGGCAAGATG TACGCCCTCAAGTGCCGCATCATCGACTGGGACGGTAGTGTCATGGGCTGGACCGACCTCGACCAGCAAATCCCG GCCTTTCCCGGCACGATGCCCTTTTCCTCGTTGCCTTGCCACCCGCTCGAGTACGACGAGGACGTGGCCGGTGTG AAGGCGATGCTAATGGAACGAGGTCGTCGTTTCGAGGCCTTGGCCGGCTACTGCTATCGCTCCTACCGCGGCGTC GCGCTGTGGCACCCTGAGCCGCGCAAGACGGTTCGCGAGAATGTGCAGTCGCGCATCGTCGTCGACGGCACCAAT TGGGAAAAGGAGAATTTTGACCACCAGGTCGAGATTACGCCTCTTTACCGGGAAGAAGCTCGCGGTAGACGCTTC AGCTGCGTCTTCCGCCGTCGTCGCAGCAGCTTCACGAGTATTGGCTCCCCTTGCTCCTCTCCCCCTCCGCCTGGT GAGGGAAGCGGAGGCGGCGCGGAAGACGGCGGCTCGAGCAGACCACCTCTGACGGAGGAGCAGCTGCTGGTGACG AGCCCGATGGTGCGCGGTTACTCGCTGCACAACAAGCGATGGATGGAATTCTTTGTCGACGACGTGGGCGACGTC GAGTTTGACGAGCACGCCTTTTCGTCCCTGGTTCTACCGGGAGATAAGAAGGAGCTGATTCTGGCATTTGCACAG TCGCAGGCTCGCTACAAGGACGCCTTTGACGATGTCATCTCTGGCAAGGGCAAGGGAATCATTGTCCTCCTGTCC GGCGGACCCGGCATCGGCAAGACGCTAACGGCCGAGTCGGTAGCCGAGGAGATGCGCGTGCCGCTTTACGCCATG AGCGCGGGCGACCTCGGCAGCGACGCCTACGACGTGGAGAATAATCTGAGCAGGACGCTGGCCATGGTGGCCGAC TGGAACGCTGTGCTGCTGCTCGACGAATGCGACGTCTTCCTTGAGGCTCGCGGGCCTCGGGATCTGGAACGCAAT CGCATCGTCGCCATCTTTCTTCGCACACTCGAATACTACCAAGGCATCCTCTTCCTCACAACCAACCGCGTACGC GACATGGACCCGGCCTTTGCCAGCCGCGTCCACGTCTCGCTTGAATACCCTCCGCTTGACAGCAATGCGCGCGCA GCCGTCTGGCGCTCTTTCCTCGCCCGCTGTGTCGTCGATGGCAAGGACACGAGTCTCCGGGGAGACGCGGCGCAT GACGTGGGCGATGACGACGTAGACCGTCTCAGTGAGCTGCCTCTGAACGGGAGGGTTATCAAGAATGTCCTCAAG GCGGCCAATCTGCTGGCTTGTCATCGGGGGGAGACGTTGGCAATGGGGCATTTGCGGACGGTGTTGAAGGTTGAG GGGCATGTGGTG |
| Transcript | >Ophio5|2373 ATGTCTGACGTCGATCATACGCGAAAGAGTGATGATGATGGCTCAAACTCGGCCGTCGTCGTCAGTCCCGTTACC GAGGAAAAGGAAAAGGCCATGGTCGGACTACTCGCCGAGAGCAAAGAGCTCTACGCCAAGCTCGACCAGCACCGA AACCGGTCCTGGACTGACAAGAAGCCGGACGACTTCGAGGAGGTGTCTGAGAACGAGGAGACAGCCAAGTACGCC ATTATCGTTCGAAAGCAGAAACCGGAGGACGCCGACGGCAGGGCCCTCGTGATTCATAGTCTCATCATCCAGTCA CCCTACCTGAAGCGCGTCCTTGCCGATGTACTCGATGGCTATCCCGGCATCTTGACCGATGTGGCACGCCTCAAG CTCTGGGAGCCCTTTGAGTGTCTCGTCCACCGCTGGGACCGGCTCGAGGATGCTGTCGGCGATGCGGCGCTCGAT GGCGCGGCCAAAGATCACCTCGAGCTGTTGATGGACATTATGCGCCAGGAGCTCGGCCCTGTCATTCAACTGCGC CAAGACTACTTCAAGAACAGGGCCGTCGCTTTCGAGCACGCCTGGACCCTGTTCCCCCCCGGCTGTATGGTCCTC GGCTACAAGAATGGGAAGCCAGTCGCGGCCAAGTTCCGGCGCGGGTACTACGTCGATACGCCCTGCGGCAAGATG TACGCCCTCAAGTGCCGCATCATCGACTGGGACGGTAGTGTCATGGGCTGGACCGACCTCGACCAGCAAATCCCG GCCTTTCCCGGCACGATGCCCTTTTCCTCGTTGCCTTGCCACCCGCTCGAGTACGACGAGGACGTGGCCGGTGTG AAGGCGATGCTAATGGAACGAGGTCGTCGTTTCGAGGCCTTGGCCGGCTACTGCTATCGCTCCTACCGCGGCGTC GCGCTGTGGCACCCTGAGCCGCGCAAGACGGTTCGCGAGAATGTGCAGTCGCGCATCGTCGTCGACGGCACCAAT TGGGAAAAGGAGAATTTTGACCACCAGGTCGAGATTACGCCTCTTTACCGGGAAGAAGCTCGCGGTAGACGCTTC AGCTGCGTCTTCCGCCGTCGTCGCAGCAGCTTCACGAGTATTGGCTCCCCTTGCTCCTCTCCCCCTCCGCCTGGT GAGGGAAGCGGAGGCGGCGCGGAAGACGGCGGCTCGAGCAGACCACCTCTGACGGAGGAGCAGCTGCTGGTGACG AGCCCGATGGTGCGCGGTTACTCGCTGCACAACAAGCGATGGATGGAATTCTTTGTCGACGACGTGGGCGACGTC GAGTTTGACGAGCACGCCTTTTCGTCCCTGGTTCTACCGGGAGATAAGAAGGAGCTGATTCTGGCATTTGCACAG TCGCAGGCTCGCTACAAGGACGCCTTTGACGATGTCATCTCTGGCAAGGGCAAGGGAATCATTGTCCTCCTGTCC GGCGGACCCGGCATCGGCAAGACGCTAACGGCCGAGTCGGTAGCCGAGGAGATGCGCGTGCCGCTTTACGCCATG AGCGCGGGCGACCTCGGCAGCGACGCCTACGACGTGGAGAATAATCTGAGCAGGACGCTGGCCATGGTGGCCGAC TGGAACGCTGTGCTGCTGCTCGACGAATGCGACGTCTTCCTTGAGGCTCGCGGGCCTCGGGATCTGGAACGCAAT CGCATCGTCGCCATCTTTCTTCGCACACTCGAATACTACCAAGGCATCCTCTTCCTCACAACCAACCGCGTACGC GACATGGACCCGGCCTTTGCCAGCCGCGTCCACGTCTCGCTTGAATACCCTCCGCTTGACAGCAATGCGCGCGCA GCCGTCTGGCGCTCTTTCCTCGCCCGCTGTGTCGTCGATGGCAAGGACACGAGTCTCCGGGGAGACGCGGCGCAT GACGTGGGCGATGACGACGTAGACCGTCTCAGTGAGCTGCCTCTGAACGGGAGGGTTATCAAGAATGTCCTCAAG GCGGCCAATCTGCTGGCTTGTCATCGGGGGGAGACGTTGGCAATGGGGCATTTGCGGACGGTGTTGAAGGTTGAG GGGCATGTGGTGTAG |
| Gene | >Ophio5|2373 ATGTCTGACGTCGATCATACGCGAAAGAGTGATGATGATGGCTCAAACTCGGCCGTCGTCGTCAGTCCCGTTACC GAGGAAAAGGAAAAGGCCATGGTCGGACTACTCGCCGAGAGCAAAGAGCTCTACGCCAAGCTCGACCAGCACCGA AACCGGTCCTGGACTGACAAGAAGCCGGACGACTTCGAGGAGGTGTCTGAGAACGAGGAGACAGCCAAGTACGCC ATTATCGTTCGAAAGCGTGAGCTTCTTCTTTTCCTCTTTACCTTGCCCTGCTGACCACGGCATTGGGCAGAGAAA CCGGAGGACGCCGACGGCAGGGCCCTCGTGATTCATAGTCTCATCATCCAGTCACCCTACCTGAAGCGCGTCCTT GCCGATGTACTCGATGGCTATCCCGGCATCTTGACCGATGTGGCACGCCTCAAGCTCTGGGAGCCCTTTGAGTGT CTCGTCCACCGCTGGGACCGGCTCGAGGATGCTGTCGGCGATGCGGCGCTCGATGGCGCGGCCAAAGATCACCTC GAGCTGTTGATGGACATTATGCGCCAGGAGCTCGGCCCTGTCATTCAACTGCGCCAAGACTACTTCAAGAACAGG GCCGTCGCTTTCGAGCACGCCTGGACCCTGTTCCCCCCCGGCTGTATGGTCCTCGGCTACAAGAATGGGAAGCCA GTCGCGGCCAAGTTCCGGCGCGGGTACTACGTCGATACGCCCTGCGGCAAGATGTACGCCCTCAAGTGCCGCATC ATCGACTGGGACGGTAGTGTCATGGGCTGGACCGACCTCGACCAGCAAATCCCGGCCTTTCCCGGCACGATGCCC TTTTCCTCGTTGCCTTGCCACCCGCTCGAGTACGACGAGGACGTGGCCGGTGTGAAGGCGATGCTAATGGAACGA GGTCGTCGTTTCGAGGCCTTGGCCGGCTACTGCTATCGCTCCTACCGCGGCGTCGCGCTGTGGCACCCTGAGCCG CGCAAGACGGTTCGCGAGAATGTGCAGTCGCGCATCGTCGTCGACGGCACCAATTGGGAAAAGGAGAATTTTGAC CACCAGGTCGAGATTACGCCTCTTTACCGGGAAGAAGCTCGCGGTAGACGCTTCAGCTGCGTCTTCCGCCGTCGT CGCAGCAGCTTCACGAGTATTGGCTCCCCTTGCTCCTCTCCCCCTCCGCCTGGTGAGGGAAGCGGAGGCGGCGCG GAAGACGGCGGCTCGAGCAGACCACCTCTGACGGAGGAGCAGCTGCTGGTGACGAGCCCGATGGTGCGCGGTTAC TCGCTGCACAACAAGCGATGGATGGAATTCTTTGTCGACGACGTGGGCGACGTCGAGTTTGACGAGCACGCCTTT TCGTCCCTGGTTCTACCGGGAGATAAGAAGGAGCTGATTCTGGCATTTGCACAGTCGCAGGCTCGCTACAAGGAC GCCTTTGACGATGTCATCTCTGGCAAGGGCAAGGGAATCATTGTCCTCCTGTCCGGCGGACCCGGCATCGGCAAG ACGCTAACGGCCGAGTCGGTAGCCGAGGAGATGCGCGTGCCGCTTTACGCCATGAGCGCGGGCGACCTCGGCAGC GACGCCTACGACGTGGAGAATAATCTGAGCAGGACGCTGGCCATGGTGGCCGACTGGAACGCTGTGCTGCTGCTC GACGAATGCGACGTCTTCCTTGAGGCTCGCGGGCCTCGGGATCTGGAACGCAATCGCATCGTCGCCATCTTTCTT CGCACACTCGAATACTACCAAGGCATCCTCTTCCTCACAACCAACCGCGTACGCGACATGGACCCGGCCTTTGCC AGCCGCGTCCACGTCTCGCTTGAATACCCTCCGCTTGACAGCAATGCGCGCGCAGCCGTCTGGCGCTCTTTCCTC GCCCGCTGTGTCGTCGATGGCAAGGACACGAGTCTCCGGGGAGACGCGGCGCATGACGTGGGCGATGACGACGTA GACCGTCTCAGTGAGCTGCCTCTGAACGGGAGGGTTATCAAGAATGTCCTCAAGGCGGCCAATCTGCTGGCTTGT CATCGGGGGGAGACGTTGGCAATGGGGCATTTGCGGACGGTGTTGAAGGTTGAGGGGCATGTGGTGTAG |