Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2363
Gene name
Locationscaffold_2:84865..85189
Strand-
Gene length (bp)324
Transcript length (bp)324
Coding sequence length (bp)321
Protein length (aa) 107

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae GN=bag PE=1 SV=1 37 93 3.0E-08
sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae GN=bag PE=1 SV=1 31 81 1.0E-07
sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae GN=bag PE=1 SV=1 32 99 1.0E-07
sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae GN=bag PE=1 SV=1 32 93 2.0E-07
sp|P27951|BAG_STRAG IgA FC receptor OS=Streptococcus agalactiae GN=bag PE=1 SV=1 41 98 4.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2363
MKVLATILMAAALAMAAEVMDDPMARGYGGGPGAMESEQYPNSPAVPAPDGPYGPDVPYGPDVPYGPDVPYGPDA
PYGPGGPHGNDAPYGPQGGMGSEPTYHHAGGM
Coding >Ophio5|2363
ATGAAGGTCCTTGCCACGATTCTTATGGCTGCCGCCCTTGCGATGGCAGCCGAAGTCATGGACGATCCGATGGCC
CGGGGCTATGGCGGTGGACCCGGTGCTATGGAATCTGAGCAGTACCCTAATTCGCCAGCGGTCCCTGCACCAGAT
GGACCTTACGGACCAGACGTCCCTTACGGACCAGACGTCCCTTACGGACCAGACGTCCCCTACGGACCAGACGCC
CCTTACGGACCAGGTGGCCCTCATGGAAACGATGCCCCCTATGGGCCACAGGGTGGCATGGGCTCCGAACCGACA
TACCATCACGCAGGAGGAATG
Transcript >Ophio5|2363
ATGAAGGTCCTTGCCACGATTCTTATGGCTGCCGCCCTTGCGATGGCAGCCGAAGTCATGGACGATCCGATGGCC
CGGGGCTATGGCGGTGGACCCGGTGCTATGGAATCTGAGCAGTACCCTAATTCGCCAGCGGTCCCTGCACCAGAT
GGACCTTACGGACCAGACGTCCCTTACGGACCAGACGTCCCTTACGGACCAGACGTCCCCTACGGACCAGACGCC
CCTTACGGACCAGGTGGCCCTCATGGAAACGATGCCCCCTATGGGCCACAGGGTGGCATGGGCTCCGAACCGACA
TACCATCACGCAGGAGGAATGTAA
Gene >Ophio5|2363
ATGAAGGTCCTTGCCACGATTCTTATGGCTGCCGCCCTTGCGATGGCAGCCGAAGTCATGGACGATCCGATGGCC
CGGGGCTATGGCGGTGGACCCGGTGCTATGGAATCTGAGCAGTACCCTAATTCGCCAGCGGTCCCTGCACCAGAT
GGACCTTACGGACCAGACGTCCCTTACGGACCAGACGTCCCTTACGGACCAGACGTCCCCTACGGACCAGACGCC
CCTTACGGACCAGGTGGCCCTCATGGAAACGATGCCCCCTATGGGCCACAGGGTGGCATGGGCTCCGAACCGACA
TACCATCACGCAGGAGGAATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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