Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2356
Gene name
Locationscaffold_2:69414..70434
Strand+
Gene length (bp)1020
Transcript length (bp)852
Coding sequence length (bp)849
Protein length (aa) 283

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 239 261 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2356
MFFPLSFAFSLPDGCVIWAWLFVSNRIVRLFSACEVTNHPAEIPPSFRLCCPSSSSISPKKLAIKLPDMSCYYKD
GRAAINGAYYPCRNGLVFNETSATAAFNATGLRTCCEPKGNDRCLPNGLCDIPGERGYLYRGACDNERGDGCRSI
CPEVNAYSWTEVKRCEPGVFCCGPDRNAERAGDCCSNIAARFLLPDLGAMPASASATSTNTASTTASTASSSSSS
SSDTRQSSSPSAALIAGPVIGAVVALALLILAVFLLRRARRKRRSGRVGGLIMLVCNR
Coding >Ophio5|2356
ATGTTTTTCCCCCTTTCTTTTGCCTTTTCTTTGCCTGATGGTTGTGTGATCTGGGCTTGGCTATTTGTTTCTAAC
CGAATTGTCCGTCTATTTTCCGCTTGCGAGGTTACCAACCACCCCGCAGAAATTCCGCCGTCTTTCCGCCTCTGT
TGTCCCTCCTCTTCCTCTATTTCACCCAAGAAACTCGCGATCAAGCTTCCCGATATGTCGTGCTACTACAAGGAC
GGCAGGGCGGCCATTAACGGGGCATACTATCCGTGCCGCAACGGCCTTGTCTTCAACGAGACGTCTGCGACGGCT
GCCTTTAACGCCACGGGCTTACGGACGTGCTGCGAGCCTAAAGGGAATGATCGGTGTCTTCCTAATGGGCTTTGT
GATATCCCGGGGGAACGAGGATATCTCTACCGAGGGGCGTGCGATAATGAGCGAGGTGATGGCTGTCGCAGTATC
TGTCCTGAAGTGAATGCCTACTCCTGGACTGAGGTCAAGAGATGCGAACCTGGTGTCTTTTGCTGCGGCCCTGAT
CGAAACGCCGAAAGGGCGGGAGACTGCTGCTCCAACATCGCCGCTCGTTTCCTACTGCCTGACCTCGGCGCCATG
CCAGCCTCCGCGTCCGCAACCTCAACCAACACGGCCTCGACGACAGCATCAACAGCATCATCATCGTCTTCTTCA
TCTTCAGACACGCGTCAATCCTCATCTCCTTCCGCTGCCCTCATCGCCGGACCCGTCATCGGAGCAGTCGTCGCT
CTCGCCCTCCTCATCCTCGCCGTTTTTCTGCTCCGTCGAGCCCGTCGGAAGCGCCGGTCCGGGCGAGTTGGCGGG
CTGATTATGTTGGTTTGCAACAGA
Transcript >Ophio5|2356
ATGTTTTTCCCCCTTTCTTTTGCCTTTTCTTTGCCTGATGGTTGTGTGATCTGGGCTTGGCTATTTGTTTCTAAC
CGAATTGTCCGTCTATTTTCCGCTTGCGAGGTTACCAACCACCCCGCAGAAATTCCGCCGTCTTTCCGCCTCTGT
TGTCCCTCCTCTTCCTCTATTTCACCCAAGAAACTCGCGATCAAGCTTCCCGATATGTCGTGCTACTACAAGGAC
GGCAGGGCGGCCATTAACGGGGCATACTATCCGTGCCGCAACGGCCTTGTCTTCAACGAGACGTCTGCGACGGCT
GCCTTTAACGCCACGGGCTTACGGACGTGCTGCGAGCCTAAAGGGAATGATCGGTGTCTTCCTAATGGGCTTTGT
GATATCCCGGGGGAACGAGGATATCTCTACCGAGGGGCGTGCGATAATGAGCGAGGTGATGGCTGTCGCAGTATC
TGTCCTGAAGTGAATGCCTACTCCTGGACTGAGGTCAAGAGATGCGAACCTGGTGTCTTTTGCTGCGGCCCTGAT
CGAAACGCCGAAAGGGCGGGAGACTGCTGCTCCAACATCGCCGCTCGTTTCCTACTGCCTGACCTCGGCGCCATG
CCAGCCTCCGCGTCCGCAACCTCAACCAACACGGCCTCGACGACAGCATCAACAGCATCATCATCGTCTTCTTCA
TCTTCAGACACGCGTCAATCCTCATCTCCTTCCGCTGCCCTCATCGCCGGACCCGTCATCGGAGCAGTCGTCGCT
CTCGCCCTCCTCATCCTCGCCGTTTTTCTGCTCCGTCGAGCCCGTCGGAAGCGCCGGTCCGGGCGAGTTGGCGGG
CTGATTATGTTGGTTTGCAACAGATAG
Gene >Ophio5|2356
ATGTTTTTCCCCCTTTCTTTTGCCTTTTCTTTGCCTGATGGTTGTGTGATCTGGGCTTGGCTATTTGTTTCTAAC
CGAATTGTCCGTCTATTTTCCGCTTGCGAGGTTACCAACCACCCCGCAGAAATTCCGCCGTCTTTCCGCCTCTGT
TGTCCCTCCTCTTCCTCTATTTCACCCAAGAAACTCGCGATCAAGCTTCCCGATATGTCGTGCTACTACAAGGAC
GGCAGGGCGGCCATTAACGGGGCATACTATCCGTGCCGCAACGGCCTTGTCTTCAACGAGACGTCTGCGACGGCT
GCCTTTAACGCCACGGGCTTACGGACGTGCTGCGAGCCTAAAGGGAATGATCGGTGTCTTCCTAATGGGCTTTGT
GATATCCCGGGGGAACGAGGATATCTCTACCGAGGGGCGTGCGATAATGAGCGAGGTGATGGCTGTCGCAGTATC
TGTCCTGAAGGTATGTGCCTCGTCATGCTTATGTCTTTGTTACGATGTTCTGAAGGAGGGAGCAGTGAATGCCTA
CTCCTGGACTGAGGTCAAGAGATGCGAACCTGGTGTCTTTTGCTGCGGCCCTGATCGAAACGCCGAAAGGGCGGG
AGACTGCTGCTCCAACATCGCCGCTCGTTTCCTACTGCCTGACCTCGGCGCCATGCCAGCCTCCGCGTCCGCAAC
CTCAACCAACACGGCCTCGACGACAGCATCAACAGCATCATCATCGTCTTCTTCATCTTCAGACACGCGTCAATC
CTCATCTCCTTCCGCTGCCCTCATCGCCGGACCCGTCATCGGAGCAGTCGTCGCTCTCGCCCTCCTCATCCTCGC
CGTTTTTCTGCTCCGTCGAGCCCGTCGGAAGCGCCGTCAGTGGACGCCGCCTGGGCAGAAGCCCCCAGTCGAGGC
GGATACGCGGCAGGGTCCGGGCGAGTTGGCGGGCTGATTATGTTGGTTTGCAGTGAGTGGTTTGAAACGACAGGT
TCGTGAAGATGGCGCTGATGGCTGAGGGAAAACTCAGACAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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