Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2351
Gene name
Locationscaffold_2:51659..52769
Strand+
Gene length (bp)1110
Transcript length (bp)1110
Coding sequence length (bp)1107
Protein length (aa) 369

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02492 cobW CobW/HypB/UreG, nucleotide-binding domain 3.0E-39 10 186

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P24203|YJIA_ECOLI Uncharacterized GTP-binding protein YjiA OS=Escherichia coli (strain K12) GN=yjiA PE=1 SV=3 8 205 8.0E-21
sp|P29937|COBW_PSEDE Protein CobW OS=Pseudomonas denitrificans GN=cobW PE=3 SV=3 9 279 3.0E-18
sp|Q869Q0|Y4527_DICDI COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1 9 174 5.0E-14
sp|Q9HZQ2|COBW_PSEAE Protein CobW OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cobW PE=3 SV=1 9 138 5.0E-14
sp|P33030|YEIR_ECOLI Zinc-binding GTPase YeiR OS=Escherichia coli (strain K12) GN=yeiR PE=1 SV=2 12 114 7.0E-14
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Swissprot ID Swissprot Description Start End E-value
sp|P24203|YJIA_ECOLI Uncharacterized GTP-binding protein YjiA OS=Escherichia coli (strain K12) GN=yjiA PE=1 SV=3 8 205 8.0E-21
sp|P29937|COBW_PSEDE Protein CobW OS=Pseudomonas denitrificans GN=cobW PE=3 SV=3 9 279 3.0E-18
sp|Q869Q0|Y4527_DICDI COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1 9 174 5.0E-14
sp|Q9HZQ2|COBW_PSEAE Protein CobW OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cobW PE=3 SV=1 9 138 5.0E-14
sp|P33030|YEIR_ECOLI Zinc-binding GTPase YeiR OS=Escherichia coli (strain K12) GN=yeiR PE=1 SV=2 12 114 7.0E-14
sp|P94400|YCIC_BACSU Putative metal chaperone YciC OS=Bacillus subtilis (strain 168) GN=yciC PE=2 SV=1 9 199 3.0E-13
sp|O74310|YOG5_SCHPO COBW domain-containing protein C15D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.05 PE=3 SV=1 4 258 4.0E-13
sp|Q99MB4|CBWD1_RAT COBW domain-containing protein 1 OS=Rattus norvegicus GN=Cbwd1 PE=2 SV=2 9 174 4.0E-12
sp|P53729|YN8H_YEAST Uncharacterized protein YNR029C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR029C PE=1 SV=1 9 168 5.0E-12
sp|Q8IUF1|CBWD2_HUMAN COBW domain-containing protein 2 OS=Homo sapiens GN=CBWD2 PE=1 SV=1 9 138 5.0E-12
sp|Q9BRT8|CBWD1_HUMAN COBW domain-containing protein 1 OS=Homo sapiens GN=CBWD1 PE=1 SV=1 9 138 6.0E-12
sp|Q8VEH6|CBWD1_MOUSE COBW domain-containing protein 1 OS=Mus musculus GN=Cbwd1 PE=1 SV=1 9 174 9.0E-12
sp|P31521|P47K_PSECL 47 kDa protein OS=Pseudomonas chlororaphis PE=3 SV=1 9 176 1.0E-11
sp|Q5JTY5|CBWD3_HUMAN COBW domain-containing protein 3 OS=Homo sapiens GN=CBWD3 PE=2 SV=1 9 173 8.0E-11
sp|Q4V339|CBWD6_HUMAN COBW domain-containing protein 6 OS=Homo sapiens GN=CBWD6 PE=3 SV=1 9 173 8.0E-11
sp|Q5RIA9|CBWD5_HUMAN COBW domain-containing protein 5 OS=Homo sapiens GN=CBWD5 PE=2 SV=1 9 173 3.0E-10
sp|P22042|YTR2_SPIAU Uncharacterized protein in trpE 3'region (Fragment) OS=Spirochaeta aurantia PE=4 SV=1 10 64 9.0E-09
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6873 0.4766 0.0404 0.0098 0.358 0.0366 0.3206 0.149 0.1757 0.0928

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2012
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1345
Ophiocordyceps australis map64 (Brazil) OphauB2|6020
Ophiocordyceps camponoti-floridani Ophcf2|05377
Ophiocordyceps camponoti-rufipedis Ophun1|4327
Ophiocordyceps kimflemingae Ophio5|2351 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2261

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2351
MSSSSPPPIPITIITGFLGSGKTTLILNLLPQLQSLNPSYRLALVKNEFGSVAIDSQLTTASNASISGVRELLGG
CICCNLVGRLAPALAELEQQVKPDRVVIETSGSAFPATLALEVNRLARETGRFVLDGVVSVVDVENWTGYEDVSY
TAKVQARYTDLVVLNKWEVAGEDRYEECLDRLGDLEVDVARVKSEAGRVDVDVIFGIDRGLAQQLTDTDIDPDTE
NNHNHNHQSEVEVLSIHLSSTSFSSPSASLPSLSRLLTTAPKDEVYRIKAITNLVSSSPKNSDPDIPAPDPSARR
YILNWAFGRWTFTALPDKQDGDEDDGLALRMTIVLARHEANKWKKRIEAGGLVELEGEGEGVLTVKRLL
Coding >Ophio5|2351
ATGTCTTCGTCCTCCCCACCCCCGATTCCCATCACCATCATAACCGGCTTTCTCGGCTCCGGCAAAACTACTCTC
ATCCTCAACCTCCTCCCGCAACTGCAAAGCCTCAACCCAAGCTACCGGCTGGCGCTGGTCAAAAACGAATTCGGC
TCCGTCGCCATCGATTCCCAACTGACGACGGCCAGCAACGCGTCCATCTCGGGCGTGCGCGAACTCCTCGGTGGT
TGCATCTGCTGCAATCTCGTCGGAAGACTGGCCCCGGCTCTGGCCGAGTTGGAACAACAGGTCAAGCCAGACCGG
GTCGTCATCGAGACAAGTGGTTCCGCTTTTCCGGCTACGCTGGCGTTGGAGGTTAATAGGTTGGCGCGTGAGACG
GGGAGATTTGTTCTTGATGGCGTCGTTTCTGTCGTCGATGTCGAGAATTGGACGGGCTATGAGGATGTGAGTTAT
ACGGCCAAGGTCCAGGCTAGGTATACGGATCTGGTGGTCTTGAATAAGTGGGAAGTGGCGGGGGAGGATCGGTAT
GAGGAGTGTTTGGACAGGCTGGGGGATCTGGAGGTGGATGTTGCGAGGGTTAAGAGTGAGGCCGGTCGGGTGGAT
GTCGATGTCATCTTCGGCATCGACCGTGGCCTCGCCCAACAGCTGACAGACACAGACATAGACCCAGACACAGAA
AACAATCACAACCACAACCACCAATCCGAAGTCGAAGTCCTCTCCATCCATCTCAGCTCAACCTCCTTCTCCTCC
CCTTCAGCATCCCTCCCCTCTCTGTCGCGCCTCCTAACAACCGCCCCCAAAGACGAAGTCTACCGAATCAAAGCC
ATCACCAACCTCGTCTCCTCGTCCCCCAAAAACTCTGATCCTGACATCCCGGCCCCAGATCCCTCGGCCCGGCGA
TACATTCTGAACTGGGCCTTCGGCCGCTGGACCTTCACCGCCCTGCCTGATAAACAAGACGGTGATGAAGATGAC
GGTTTGGCGTTGCGCATGACCATCGTCCTCGCTAGGCATGAGGCCAATAAGTGGAAGAAGAGGATAGAAGCTGGC
GGGCTTGTCGAGCTGGAGGGCGAGGGCGAGGGTGTCTTGACCGTCAAGAGGCTCTTG
Transcript >Ophio5|2351
ATGTCTTCGTCCTCCCCACCCCCGATTCCCATCACCATCATAACCGGCTTTCTCGGCTCCGGCAAAACTACTCTC
ATCCTCAACCTCCTCCCGCAACTGCAAAGCCTCAACCCAAGCTACCGGCTGGCGCTGGTCAAAAACGAATTCGGC
TCCGTCGCCATCGATTCCCAACTGACGACGGCCAGCAACGCGTCCATCTCGGGCGTGCGCGAACTCCTCGGTGGT
TGCATCTGCTGCAATCTCGTCGGAAGACTGGCCCCGGCTCTGGCCGAGTTGGAACAACAGGTCAAGCCAGACCGG
GTCGTCATCGAGACAAGTGGTTCCGCTTTTCCGGCTACGCTGGCGTTGGAGGTTAATAGGTTGGCGCGTGAGACG
GGGAGATTTGTTCTTGATGGCGTCGTTTCTGTCGTCGATGTCGAGAATTGGACGGGCTATGAGGATGTGAGTTAT
ACGGCCAAGGTCCAGGCTAGGTATACGGATCTGGTGGTCTTGAATAAGTGGGAAGTGGCGGGGGAGGATCGGTAT
GAGGAGTGTTTGGACAGGCTGGGGGATCTGGAGGTGGATGTTGCGAGGGTTAAGAGTGAGGCCGGTCGGGTGGAT
GTCGATGTCATCTTCGGCATCGACCGTGGCCTCGCCCAACAGCTGACAGACACAGACATAGACCCAGACACAGAA
AACAATCACAACCACAACCACCAATCCGAAGTCGAAGTCCTCTCCATCCATCTCAGCTCAACCTCCTTCTCCTCC
CCTTCAGCATCCCTCCCCTCTCTGTCGCGCCTCCTAACAACCGCCCCCAAAGACGAAGTCTACCGAATCAAAGCC
ATCACCAACCTCGTCTCCTCGTCCCCCAAAAACTCTGATCCTGACATCCCGGCCCCAGATCCCTCGGCCCGGCGA
TACATTCTGAACTGGGCCTTCGGCCGCTGGACCTTCACCGCCCTGCCTGATAAACAAGACGGTGATGAAGATGAC
GGTTTGGCGTTGCGCATGACCATCGTCCTCGCTAGGCATGAGGCCAATAAGTGGAAGAAGAGGATAGAAGCTGGC
GGGCTTGTCGAGCTGGAGGGCGAGGGCGAGGGTGTCTTGACCGTCAAGAGGCTCTTGTAG
Gene >Ophio5|2351
ATGTCTTCGTCCTCCCCACCCCCGATTCCCATCACCATCATAACCGGCTTTCTCGGCTCCGGCAAAACTACTCTC
ATCCTCAACCTCCTCCCGCAACTGCAAAGCCTCAACCCAAGCTACCGGCTGGCGCTGGTCAAAAACGAATTCGGC
TCCGTCGCCATCGATTCCCAACTGACGACGGCCAGCAACGCGTCCATCTCGGGCGTGCGCGAACTCCTCGGTGGT
TGCATCTGCTGCAATCTCGTCGGAAGACTGGCCCCGGCTCTGGCCGAGTTGGAACAACAGGTCAAGCCAGACCGG
GTCGTCATCGAGACAAGTGGTTCCGCTTTTCCGGCTACGCTGGCGTTGGAGGTTAATAGGTTGGCGCGTGAGACG
GGGAGATTTGTTCTTGATGGCGTCGTTTCTGTCGTCGATGTCGAGAATTGGACGGGCTATGAGGATGTGAGTTAT
ACGGCCAAGGTCCAGGCTAGGTATACGGATCTGGTGGTCTTGAATAAGTGGGAAGTGGCGGGGGAGGATCGGTAT
GAGGAGTGTTTGGACAGGCTGGGGGATCTGGAGGTGGATGTTGCGAGGGTTAAGAGTGAGGCCGGTCGGGTGGAT
GTCGATGTCATCTTCGGCATCGACCGTGGCCTCGCCCAACAGCTGACAGACACAGACATAGACCCAGACACAGAA
AACAATCACAACCACAACCACCAATCCGAAGTCGAAGTCCTCTCCATCCATCTCAGCTCAACCTCCTTCTCCTCC
CCTTCAGCATCCCTCCCCTCTCTGTCGCGCCTCCTAACAACCGCCCCCAAAGACGAAGTCTACCGAATCAAAGCC
ATCACCAACCTCGTCTCCTCGTCCCCCAAAAACTCTGATCCTGACATCCCGGCCCCAGATCCCTCGGCCCGGCGA
TACATTCTGAACTGGGCCTTCGGCCGCTGGACCTTCACCGCCCTGCCTGATAAACAAGACGGTGATGAAGATGAC
GGTTTGGCGTTGCGCATGACCATCGTCCTCGCTAGGCATGAGGCCAATAAGTGGAAGAAGAGGATAGAAGCTGGC
GGGCTTGTCGAGCTGGAGGGCGAGGGCGAGGGTGTCTTGACCGTCAAGAGGCTCTTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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