Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2348
Gene name
Locationscaffold_2:44387..46157
Strand-
Gene length (bp)1770
Transcript length (bp)1770
Coding sequence length (bp)1770
Protein length (aa) 590

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2348
MRSASTWLASCAAVLCAARPAPLQDSCRRVGCRLDRVTGGCFSHDGSPCHLPTVEPPPAKGRFCVDLYSLIYTKT
PIHSRCGTTGAVDLSELLPGLFTTAQLLQSQHREQTVGNHGQPIRNNPTVPDIHWNSRHHRGSDTPLYLPSDQPW
DLDQLPTINQVNPYQVTYHSPPSRLRRRPLSEDEMNPYSDWENTAATWRGQSPPKDPYPLPRVLNRTRRDRTIPD
PERTWQHASPSEYPSSSTHPWDDENQAFDRQNSEGDHDYPQRPPIYPTDTLDQAHWDYMSQYPGTKGSEGADGGS
NRSKYSLPIPTVDDRSQGLGRKLPEDNEETRSRNQGTSDLSPYPPPHPPYPPYSDYYPPPPNYGPVNNYYNHISP
SYEFNSVTNRHTKPSPFSPDEFDPSNIPLPNGVGFVDNSSGKDSTDNRGSNGGTYVGANNGHFLDKGATRIGTDS
RGYQGHFSDSRGTNSHGYSDSDSRGRQTVKNSGGSRGRVAGGHSMVTTGEKASSDDEDVADVLEEDATEEDEHGT
PAVASPDQLTDQTSNFENKDTTEANGANGRASETAAEAPSKKWRLPKDDEPGLSTLGATETDFW*
Coding >Ophio5|2348
ATGCGTAGCGCCTCGACTTGGCTCGCTTCCTGCGCCGCTGTTCTCTGCGCCGCTCGTCCAGCGCCTCTGCAGGAT
AGCTGCAGAAGGGTTGGCTGCCGACTTGATCGAGTTACTGGAGGGTGCTTCTCCCATGATGGCTCTCCCTGTCAT
CTTCCTACGGTCGAACCTCCCCCAGCGAAAGGACGGTTTTGCGTCGATCTGTACAGCTTGATTTATACCAAAACT
CCAATCCACTCACGCTGTGGTACCACAGGAGCTGTTGACCTTTCCGAACTGCTGCCTGGCTTGTTTACAACTGCT
CAGCTGCTACAATCTCAGCACAGAGAGCAGACTGTTGGCAATCACGGTCAGCCTATCAGGAATAATCCGACGGTC
CCGGACATCCATTGGAACAGCAGACATCATCGCGGTTCTGACACACCTCTCTATCTTCCTTCCGACCAGCCTTGG
GATCTTGATCAGCTCCCGACCATCAACCAGGTGAACCCGTACCAAGTTACATACCACAGCCCCCCTTCTCGCCTG
CGGCGTCGGCCTCTATCGGAGGATGAGATGAATCCGTACAGCGACTGGGAAAATACGGCAGCAACTTGGCGTGGC
CAAAGCCCCCCCAAGGATCCTTATCCTTTGCCTCGTGTACTGAACCGGACTCGTCGAGACCGTACCATACCTGAC
CCGGAAAGAACTTGGCAGCATGCGAGCCCTTCCGAATATCCGTCCTCCAGTACACATCCCTGGGACGATGAGAAC
CAGGCTTTCGACCGGCAGAACTCCGAAGGAGATCATGACTACCCGCAACGTCCTCCTATCTATCCTACTGACACC
TTGGATCAAGCCCACTGGGATTACATGTCACAGTATCCCGGCACGAAAGGCTCTGAGGGGGCAGATGGTGGATCA
AACCGCTCCAAGTACTCTCTTCCTATCCCCACGGTCGATGACAGGTCACAGGGTCTTGGTAGAAAGCTCCCGGAG
GACAACGAGGAAACACGAAGCCGTAACCAAGGCACCAGCGACCTTTCTCCATACCCTCCTCCGCACCCGCCATAT
CCTCCGTACTCTGACTACTACCCTCCGCCTCCCAACTACGGACCCGTCAACAACTACTACAACCACATCTCTCCC
AGTTACGAGTTCAACTCCGTCACCAACAGGCACACTAAGCCATCCCCATTCTCGCCCGACGAATTCGACCCCAGC
AACATCCCACTACCAAACGGGGTGGGCTTCGTTGATAACAGTAGCGGCAAGGACTCGACAGACAACCGGGGCTCC
AACGGCGGGACCTACGTCGGTGCCAACAACGGCCACTTTCTCGACAAGGGCGCCACGAGGATCGGCACGGATAGC
CGTGGTTACCAGGGGCATTTTAGCGATAGTCGCGGCACGAATAGTCATGGCTACTCGGATAGCGATTCTCGTGGT
CGGCAAACGGTCAAAAACAGTGGCGGCAGCCGCGGTAGGGTGGCTGGCGGTCATTCCATGGTCACGACAGGCGAG
AAAGCAAGTTCTGATGATGAGGATGTCGCCGATGTTCTCGAGGAAGATGCTACCGAAGAAGATGAGCACGGTACA
CCTGCCGTCGCCTCTCCTGATCAACTAACGGATCAGACTTCGAATTTCGAGAACAAAGACACAACTGAAGCTAAT
GGAGCAAACGGGCGGGCCTCCGAAACTGCTGCCGAGGCCCCCAGCAAGAAGTGGAGGCTCCCGAAGGATGACGAG
CCTGGGTTGTCGACATTGGGGGCAACAGAGACGGACTTCTGGTAA
Transcript >Ophio5|2348
ATGCGTAGCGCCTCGACTTGGCTCGCTTCCTGCGCCGCTGTTCTCTGCGCCGCTCGTCCAGCGCCTCTGCAGGAT
AGCTGCAGAAGGGTTGGCTGCCGACTTGATCGAGTTACTGGAGGGTGCTTCTCCCATGATGGCTCTCCCTGTCAT
CTTCCTACGGTCGAACCTCCCCCAGCGAAAGGACGGTTTTGCGTCGATCTGTACAGCTTGATTTATACCAAAACT
CCAATCCACTCACGCTGTGGTACCACAGGAGCTGTTGACCTTTCCGAACTGCTGCCTGGCTTGTTTACAACTGCT
CAGCTGCTACAATCTCAGCACAGAGAGCAGACTGTTGGCAATCACGGTCAGCCTATCAGGAATAATCCGACGGTC
CCGGACATCCATTGGAACAGCAGACATCATCGCGGTTCTGACACACCTCTCTATCTTCCTTCCGACCAGCCTTGG
GATCTTGATCAGCTCCCGACCATCAACCAGGTGAACCCGTACCAAGTTACATACCACAGCCCCCCTTCTCGCCTG
CGGCGTCGGCCTCTATCGGAGGATGAGATGAATCCGTACAGCGACTGGGAAAATACGGCAGCAACTTGGCGTGGC
CAAAGCCCCCCCAAGGATCCTTATCCTTTGCCTCGTGTACTGAACCGGACTCGTCGAGACCGTACCATACCTGAC
CCGGAAAGAACTTGGCAGCATGCGAGCCCTTCCGAATATCCGTCCTCCAGTACACATCCCTGGGACGATGAGAAC
CAGGCTTTCGACCGGCAGAACTCCGAAGGAGATCATGACTACCCGCAACGTCCTCCTATCTATCCTACTGACACC
TTGGATCAAGCCCACTGGGATTACATGTCACAGTATCCCGGCACGAAAGGCTCTGAGGGGGCAGATGGTGGATCA
AACCGCTCCAAGTACTCTCTTCCTATCCCCACGGTCGATGACAGGTCACAGGGTCTTGGTAGAAAGCTCCCGGAG
GACAACGAGGAAACACGAAGCCGTAACCAAGGCACCAGCGACCTTTCTCCATACCCTCCTCCGCACCCGCCATAT
CCTCCGTACTCTGACTACTACCCTCCGCCTCCCAACTACGGACCCGTCAACAACTACTACAACCACATCTCTCCC
AGTTACGAGTTCAACTCCGTCACCAACAGGCACACTAAGCCATCCCCATTCTCGCCCGACGAATTCGACCCCAGC
AACATCCCACTACCAAACGGGGTGGGCTTCGTTGATAACAGTAGCGGCAAGGACTCGACAGACAACCGGGGCTCC
AACGGCGGGACCTACGTCGGTGCCAACAACGGCCACTTTCTCGACAAGGGCGCCACGAGGATCGGCACGGATAGC
CGTGGTTACCAGGGGCATTTTAGCGATAGTCGCGGCACGAATAGTCATGGCTACTCGGATAGCGATTCTCGTGGT
CGGCAAACGGTCAAAAACAGTGGCGGCAGCCGCGGTAGGGTGGCTGGCGGTCATTCCATGGTCACGACAGGCGAG
AAAGCAAGTTCTGATGATGAGGATGTCGCCGATGTTCTCGAGGAAGATGCTACCGAAGAAGATGAGCACGGTACA
CCTGCCGTCGCCTCTCCTGATCAACTAACGGATCAGACTTCGAATTTCGAGAACAAAGACACAACTGAAGCTAAT
GGAGCAAACGGGCGGGCCTCCGAAACTGCTGCCGAGGCCCCCAGCAAGAAGTGGAGGCTCCCGAAGGATGACGAG
CCTGGGTTGTCGACATTGGGGGCAACAGAGACGGACTTCTGGTAA
Gene >Ophio5|2348
ATGCGTAGCGCCTCGACTTGGCTCGCTTCCTGCGCCGCTGTTCTCTGCGCCGCTCGTCCAGCGCCTCTGCAGGAT
AGCTGCAGAAGGGTTGGCTGCCGACTTGATCGAGTTACTGGAGGGTGCTTCTCCCATGATGGCTCTCCCTGTCAT
CTTCCTACGGTCGAACCTCCCCCAGCGAAAGGACGGTTTTGCGTCGATCTGTACAGCTTGATTTATACCAAAACT
CCAATCCACTCACGCTGTGGTACCACAGGAGCTGTTGACCTTTCCGAACTGCTGCCTGGCTTGTTTACAACTGCT
CAGCTGCTACAATCTCAGCACAGAGAGCAGACTGTTGGCAATCACGGTCAGCCTATCAGGAATAATCCGACGGTC
CCGGACATCCATTGGAACAGCAGACATCATCGCGGTTCTGACACACCTCTCTATCTTCCTTCCGACCAGCCTTGG
GATCTTGATCAGCTCCCGACCATCAACCAGGTGAACCCGTACCAAGTTACATACCACAGCCCCCCTTCTCGCCTG
CGGCGTCGGCCTCTATCGGAGGATGAGATGAATCCGTACAGCGACTGGGAAAATACGGCAGCAACTTGGCGTGGC
CAAAGCCCCCCCAAGGATCCTTATCCTTTGCCTCGTGTACTGAACCGGACTCGTCGAGACCGTACCATACCTGAC
CCGGAAAGAACTTGGCAGCATGCGAGCCCTTCCGAATATCCGTCCTCCAGTACACATCCCTGGGACGATGAGAAC
CAGGCTTTCGACCGGCAGAACTCCGAAGGAGATCATGACTACCCGCAACGTCCTCCTATCTATCCTACTGACACC
TTGGATCAAGCCCACTGGGATTACATGTCACAGTATCCCGGCACGAAAGGCTCTGAGGGGGCAGATGGTGGATCA
AACCGCTCCAAGTACTCTCTTCCTATCCCCACGGTCGATGACAGGTCACAGGGTCTTGGTAGAAAGCTCCCGGAG
GACAACGAGGAAACACGAAGCCGTAACCAAGGCACCAGCGACCTTTCTCCATACCCTCCTCCGCACCCGCCATAT
CCTCCGTACTCTGACTACTACCCTCCGCCTCCCAACTACGGACCCGTCAACAACTACTACAACCACATCTCTCCC
AGTTACGAGTTCAACTCCGTCACCAACAGGCACACTAAGCCATCCCCATTCTCGCCCGACGAATTCGACCCCAGC
AACATCCCACTACCAAACGGGGTGGGCTTCGTTGATAACAGTAGCGGCAAGGACTCGACAGACAACCGGGGCTCC
AACGGCGGGACCTACGTCGGTGCCAACAACGGCCACTTTCTCGACAAGGGCGCCACGAGGATCGGCACGGATAGC
CGTGGTTACCAGGGGCATTTTAGCGATAGTCGCGGCACGAATAGTCATGGCTACTCGGATAGCGATTCTCGTGGT
CGGCAAACGGTCAAAAACAGTGGCGGCAGCCGCGGTAGGGTGGCTGGCGGTCATTCCATGGTCACGACAGGCGAG
AAAGCAAGTTCTGATGATGAGGATGTCGCCGATGTTCTCGAGGAAGATGCTACCGAAGAAGATGAGCACGGTACA
CCTGCCGTCGCCTCTCCTGATCAACTAACGGATCAGACTTCGAATTTCGAGAACAAAGACACAACTGAAGCTAAT
GGAGCAAACGGGCGGGCCTCCGAAACTGCTGCCGAGGCCCCCAGCAAGAAGTGGAGGCTCCCGAAGGATGACGAG
CCTGGGTTGTCGACATTGGGGGCAACAGAGACGGACTTCTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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