Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2345
Gene name
Locationscaffold_2:36039..37136
Strand+
Gene length (bp)1097
Transcript length (bp)870
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 9.4E-26 64 278

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q24JP1|ALCS_ASPFU Protein alcS OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alcS PE=3 SV=1 9 274 1.0E-45
sp|B0YBR5|ALCS_ASPFC Protein alcS OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=alcS PE=3 SV=2 9 274 1.0E-45
sp|Q460G9|ALCS_EMENI Protein alcS OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcS PE=2 SV=1 44 274 7.0E-39
sp|O14201|MUG86_SCHPO Meiotically up-regulated gene 86 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug86 PE=1 SV=1 5 286 8.0E-13
sp|P41943|GPR1_YARLI Glyoxylate pathway regulator OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GPR1 PE=1 SV=3 2 282 1.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|Q24JP1|ALCS_ASPFU Protein alcS OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=alcS PE=3 SV=1 9 274 1.0E-45
sp|B0YBR5|ALCS_ASPFC Protein alcS OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=alcS PE=3 SV=2 9 274 1.0E-45
sp|Q460G9|ALCS_EMENI Protein alcS OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcS PE=2 SV=1 44 274 7.0E-39
sp|O14201|MUG86_SCHPO Meiotically up-regulated gene 86 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug86 PE=1 SV=1 5 286 8.0E-13
sp|P41943|GPR1_YARLI Glyoxylate pathway regulator OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GPR1 PE=1 SV=3 2 282 1.0E-09
sp|P32907|ATO2_YEAST Ammonia transport outward protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATO2 PE=1 SV=1 1 218 2.0E-09
sp|P25613|ADY2_YEAST Accumulation of dyads protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADY2 PE=1 SV=1 104 203 3.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

Domain # Start End Length
1 67 84 17
2 99 121 22
3 123 145 22
4 174 196 22
5 203 225 22
6 253 275 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2345
MLSTEQRSTEHGAPDYTPVSGADADTPRQQQQQQPTIQRQTADLTPDMYNRLAVEFERRMREDRRKSFGCATLIA
LAGFLLSLSPLACDLMGWRGAGGFGAASIGTFFFQGGVMMIIGAVLEWVLGNSFFAVVFATYGGFWLSYAATLNP
SFAAFASYAAPDAKSPAEGLASPAFQSSLAFWLLFMGFITFIFFICSLAMSVVFMVLFLSLTITFLLLVGALFAL
SNDPVGNMRVANRCIVGAGSSLFVTAMSGWYVFASILFAILGFPIKLPLLEIPHRKKGGDDIEG
Coding >Ophio5|2345
ATGTTGTCGACCGAGCAAAGGTCAACTGAACATGGGGCGCCCGATTATACGCCAGTCAGCGGAGCGGATGCAGAC
ACACCACGGCAGCAGCAGCAGCAGCAGCCAACGATTCAACGACAGACGGCAGACCTGACTCCCGACATGTACAAC
CGGCTGGCCGTCGAGTTCGAGAGAAGGATGAGGGAGGATAGGCGCAAGAGTTTTGGCTGCGCCACCCTCATTGCC
CTCGCCGGCTTCTTGTTGTCCCTGAGCCCCTTGGCCTGCGACCTGATGGGTTGGCGAGGAGCGGGCGGGTTCGGT
GCCGCGTCCATCGGTACCTTCTTCTTCCAGGGCGGTGTGATGATGATCATCGGCGCCGTGCTCGAGTGGGTTCTA
GGCAACAGCTTCTTCGCCGTCGTCTTTGCCACTTATGGTGGCTTTTGGCTTTCCTATGCTGCGACTCTCAACCCT
TCGTTTGCGGCCTTTGCTTCGTACGCGGCCCCGGACGCCAAGTCGCCTGCTGAGGGTTTAGCCTCGCCTGCTTTT
CAGTCGTCTCTCGCATTCTGGCTGCTATTCATGGGCTTCATCACCTTCATTTTCTTTATATGCTCCTTGGCAATG
AGCGTTGTATTCATGGTTCTCTTCTTGAGCCTGACCATCACCTTTCTGCTCCTGGTAGGGGCGCTCTTTGCTCTA
TCCAACGATCCTGTAGGAAATATGCGTGTCGCCAATCGCTGTATAGTGGGTGCCGGCTCAAGTCTTTTCGTAACG
GCTATGAGTGGATGGTATGTATTTGCCTCCATTCTTTTCGCCATCCTCGGCTTCCCTATCAAGCTCCCCTTATTG
GAAATTCCCCATCGCAAGAAAGGCGGCGATGACATTGAGGGC
Transcript >Ophio5|2345
ATGTTGTCGACCGAGCAAAGGTCAACTGAACATGGGGCGCCCGATTATACGCCAGTCAGCGGAGCGGATGCAGAC
ACACCACGGCAGCAGCAGCAGCAGCAGCCAACGATTCAACGACAGACGGCAGACCTGACTCCCGACATGTACAAC
CGGCTGGCCGTCGAGTTCGAGAGAAGGATGAGGGAGGATAGGCGCAAGAGTTTTGGCTGCGCCACCCTCATTGCC
CTCGCCGGCTTCTTGTTGTCCCTGAGCCCCTTGGCCTGCGACCTGATGGGTTGGCGAGGAGCGGGCGGGTTCGGT
GCCGCGTCCATCGGTACCTTCTTCTTCCAGGGCGGTGTGATGATGATCATCGGCGCCGTGCTCGAGTGGGTTCTA
GGCAACAGCTTCTTCGCCGTCGTCTTTGCCACTTATGGTGGCTTTTGGCTTTCCTATGCTGCGACTCTCAACCCT
TCGTTTGCGGCCTTTGCTTCGTACGCGGCCCCGGACGCCAAGTCGCCTGCTGAGGGTTTAGCCTCGCCTGCTTTT
CAGTCGTCTCTCGCATTCTGGCTGCTATTCATGGGCTTCATCACCTTCATTTTCTTTATATGCTCCTTGGCAATG
AGCGTTGTATTCATGGTTCTCTTCTTGAGCCTGACCATCACCTTTCTGCTCCTGGTAGGGGCGCTCTTTGCTCTA
TCCAACGATCCTGTAGGAAATATGCGTGTCGCCAATCGCTGTATAGTGGGTGCCGGCTCAAGTCTTTTCGTAACG
GCTATGAGTGGATGGTATGTATTTGCCTCCATTCTTTTCGCCATCCTCGGCTTCCCTATCAAGCTCCCCTTATTG
GAAATTCCCCATCGCAAGAAAGGCGGCGATGACATTGAGGGCTAG
Gene >Ophio5|2345
ATGTTGTCGACCGAGCAAAGGTCAACTGAACATGGGGCGCCCGATTATACGCCAGTCAGCGGAGCGGATGCAGAC
ACACCACGGCAGCAGCAGCAGCAGCAGCCAACGATTCAACGACAGACGGCAGACCTGACTCCCGACATGTACAAC
CGGCTGGCCGTCGAGTTCGAGAGAAGGATGAGGGAGGATAGGCGCAAGAGTTTTGGCTGCGCCACCCTCATGTAA
GGAGGTGCTAGCGTCGGTCAATGCGACGAGTCGAGCCATTGGCTGACATTTGGTCAGTGCCCTCGCCGGCTTCTT
GTTGTCCCTGAGCCCCTTGGCCTGCGACCTGATGGGTTGGCGAGGAGCGGGCGGGTTCGGTGCCGCGTCCATGTA
AGGCTCTACCTCTCTAACTGGACAAGATCTGAGACTGAAGATAACGATAGCGGTACCTTCTTCTTCCAGGGCGGT
GTGATGATGATCATCGGCGCCGTGCTCGAGTGGGTTCTAGGCAACAGCTTCTTCGCCGTCGTCTTTGCCACTTAT
GGTGGCTTTTGGCTTTCCTATGCTGCGACTCTCAACCCTTCGTTTGCGGCCTTTGCTTCGTACGCGGCCCCGGAC
GCCAAGTCGCCTGCTGAGGGTTTAGCCTCGCCTGCTTTTCAGTCGTCTCTCGGTATGTCTCTTACGCCAATCCAA
TCCACTGGCTAGGACTCACCTGCATGCATAGCATTCTGGCTGCTATTCATGGGCTTCATCACCTTCATTTTCTTT
ATATGCTCCTTGGCAATGAGCGTTGTATTCATGGTTCTCTTCTTGAGCCTGACCATCACCTTTCTGCTCCTGGTA
GGGGCGCTCTTTGCTCTATCCAACGATCCTGTAGGAAATATGCGTGTCGCCAATCGCTGTATAGTGGTGAGTCCA
GCTGCAACGGTTGAGTGGCGGGTCAGTTGTCTATACTAACGACCGAACAGGGTGCCGGCTCAAGTCTTTTCGTAA
CGGCTATGAGTGGATGGTATGTATTTGCCTCCATTCTTTTCGCCATCCTCGGCTTCCCTATCAAGCTCCCCTTAT
TGGAAATTCCCCATCGCAAGAAAGGCGGCGATGACATTGAGGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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