Protein ID | Ophio5|2341 |
Gene name | |
Location | scaffold_2:24848..25301 |
Strand | - |
Gene length (bp) | 453 |
Transcript length (bp) | 453 |
Coding sequence length (bp) | 450 |
Protein length (aa) | 150 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 26 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 3.75 | 0.00 | 7.68 |
CcL | In ants, during behavior modification | 15.34 | 2.65 | 28.03 |
CcD | In ants, recently dead | 22.12 | 6.07 | 38.17 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.005848 | yes |
SC16a | CcD | 0.000770 | yes |
CcL | CcD | 0.367037 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2341 MYAHGAVQGFLLAFGLLLAPQMSLASPMPIDLSGVRKSHNARGGNSNGATVTGGNDTFASRGNGGAWPFPAPNRA NPLPADLQATRNFRGLLNRTPDNEAIREAIRNQAPILNALRGGGGRSGDSRNQPRSDPSYQIPPMLEEIGQQEAE |
Coding | >Ophio5|2341 ATGTACGCTCACGGCGCCGTTCAAGGCTTCCTCTTGGCCTTTGGTCTTCTTCTCGCCCCTCAGATGAGCCTTGCG AGCCCGATGCCGATTGATCTAAGCGGAGTCCGGAAATCGCACAATGCCAGAGGCGGCAACAGTAACGGCGCTACA GTCACTGGCGGGAATGACACTTTCGCCAGTCGCGGCAACGGAGGCGCATGGCCTTTCCCTGCCCCTAACCGCGCG AATCCTCTGCCTGCCGACCTTCAGGCCACGAGAAACTTCCGGGGCCTTCTCAATCGCACCCCGGACAATGAAGCT ATACGAGAGGCCATTCGGAATCAGGCTCCAATTTTGAACGCACTTCGGGGTGGTGGTGGACGCTCTGGGGATAGC AGGAATCAGCCTCGTTCTGATCCGTCTTATCAGATTCCGCCAATGTTGGAAGAGATAGGGCAGCAGGAAGCTGAA |
Transcript | >Ophio5|2341 ATGTACGCTCACGGCGCCGTTCAAGGCTTCCTCTTGGCCTTTGGTCTTCTTCTCGCCCCTCAGATGAGCCTTGCG AGCCCGATGCCGATTGATCTAAGCGGAGTCCGGAAATCGCACAATGCCAGAGGCGGCAACAGTAACGGCGCTACA GTCACTGGCGGGAATGACACTTTCGCCAGTCGCGGCAACGGAGGCGCATGGCCTTTCCCTGCCCCTAACCGCGCG AATCCTCTGCCTGCCGACCTTCAGGCCACGAGAAACTTCCGGGGCCTTCTCAATCGCACCCCGGACAATGAAGCT ATACGAGAGGCCATTCGGAATCAGGCTCCAATTTTGAACGCACTTCGGGGTGGTGGTGGACGCTCTGGGGATAGC AGGAATCAGCCTCGTTCTGATCCGTCTTATCAGATTCCGCCAATGTTGGAAGAGATAGGGCAGCAGGAAGCTGAA TAA |
Gene | >Ophio5|2341 ATGTACGCTCACGGCGCCGTTCAAGGCTTCCTCTTGGCCTTTGGTCTTCTTCTCGCCCCTCAGATGAGCCTTGCG AGCCCGATGCCGATTGATCTAAGCGGAGTCCGGAAATCGCACAATGCCAGAGGCGGCAACAGTAACGGCGCTACA GTCACTGGCGGGAATGACACTTTCGCCAGTCGCGGCAACGGAGGCGCATGGCCTTTCCCTGCCCCTAACCGCGCG AATCCTCTGCCTGCCGACCTTCAGGCCACGAGAAACTTCCGGGGCCTTCTCAATCGCACCCCGGACAATGAAGCT ATACGAGAGGCCATTCGGAATCAGGCTCCAATTTTGAACGCACTTCGGGGTGGTGGTGGACGCTCTGGGGATAGC AGGAATCAGCCTCGTTCTGATCCGTCTTATCAGATTCCGCCAATGTTGGAAGAGATAGGGCAGCAGGAAGCTGAA TAA |