Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2303
Gene name
Locationscaffold_197:8653..10399
Strand+
Gene length (bp)1746
Transcript length (bp)1623
Coding sequence length (bp)1620
Protein length (aa) 540

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 7.1E-14 11 163

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 1 250 7.0E-67
sp|Q51MB1|PALI_MAGO7 pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 1 295 2.0E-59
sp|O93956|PALI_EMENI pH-response regulator protein palI/RIM9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palI PE=1 SV=2 1 245 4.0E-42
sp|Q7Z8R5|PALI_YARLI pH-response regulator protein palI/RIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM9 PE=3 SV=3 2 248 1.0E-40
sp|Q759Y2|PALI_ASHGO pH-response regulator protein palI/RIM9 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RIM9 PE=3 SV=1 5 198 2.0E-19
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Swissprot ID Swissprot Description Start End E-value
sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 1 250 7.0E-67
sp|Q51MB1|PALI_MAGO7 pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 1 295 2.0E-59
sp|O93956|PALI_EMENI pH-response regulator protein palI/RIM9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=palI PE=1 SV=2 1 245 4.0E-42
sp|Q7Z8R5|PALI_YARLI pH-response regulator protein palI/RIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM9 PE=3 SV=3 2 248 1.0E-40
sp|Q759Y2|PALI_ASHGO pH-response regulator protein palI/RIM9 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RIM9 PE=3 SV=1 5 198 2.0E-19
sp|O74472|MUG33_SCHPO Meiotically up-regulated gene 33 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug33 PE=1 SV=1 2 215 7.0E-19
sp|Q6CUG3|PALI2_KLULA pH-response regulator palI/RIM9 homolog 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0C05060g PE=3 SV=1 22 193 4.0E-16
sp|Q6CXZ7|PALI1_KLULA pH-response regulator palI/RIM9 homolog 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0A04389g PE=3 SV=1 20 191 2.0E-15
sp|Q04734|PALI_YEAST pH-response regulator protein palI/RIM9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM9 PE=1 SV=1 24 203 7.0E-14
sp|Q51MB1|PALI_MAGO7 pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 453 537 1.0E-10
sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 301 526 5.0E-09
sp|Q10268|MAC1_SCHPO Membrane-anchored protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mac1 PE=1 SV=1 17 230 8.0E-09
sp|Q08157|YOL19_YEAST Uncharacterized membrane protein YOL019W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL019W PE=1 SV=1 13 174 3.0E-08
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GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0016020 membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 82 104 22
3 117 139 22
4 149 171 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2303
MVRPSTPLSVLLFAAFALLLASTISVPIVKVISLASFKGVNFGALGFCRGDSCSLSLGLNSAALLDNQNQAFKLP
PNARDGISFALILHPVATALALAITIMSIASHLHSLAHSVRYLLILFVLIFVTFVVSLAAFLVDVILFVPHLEFG
AFLTVAATIVLAISGIASCAMRRAVVSRLAHKRRVEENAEMSGENYNLNSMSKPSFTSSTEPTLPVVGSVMSTVD
TKPQFAAFEYPNKADRASDDMALSSPTLPQYSTVNNMYGDRPPVRAGMAPAGAFGVGGSPMRGRGGFGSPPGRGG
FSSPARGGSGSPGRGGVGLPNRVSPRGGAPPMGPPRGAVGARGGRGGAQGFGNATRQYDASPPYGQVPLSPRSTG
SGRSRYGSLARAESPPPFRGRMASEESRYSDEGAYVPPRAGWNNRQESRGPDGGEFDVYSLYGEQEQQYHGDGPM
TRTRSPAESERSGLTSISQRGVNPRWRGQAPPRRPSNAGLVPRGLAPQKPLRRPDVLLDNPDFALGGGGGGARRG
GLGMTPGSAYPTTAF
Coding >Ophio5|2303
ATGGTTCGCCCGTCGACGCCCTTGTCGGTGCTGCTGTTCGCCGCTTTTGCCCTGCTGCTCGCTTCCACCATTTCG
GTCCCCATAGTTAAGGTTATTTCTCTGGCCTCGTTCAAAGGCGTCAACTTTGGCGCCTTGGGCTTTTGCAGAGGT
GACAGCTGCAGCCTGAGCCTTGGATTGAATTCCGCCGCCCTGCTTGACAATCAGAACCAGGCCTTTAAGCTGCCG
CCCAACGCACGGGATGGCATTTCCTTCGCCCTCATCCTACATCCCGTTGCCACCGCCCTCGCCCTCGCCATAACA
ATCATGTCCATCGCCTCTCATCTCCATTCTCTAGCCCACTCGGTCCGATACCTACTAATCCTCTTTGTCCTCATC
TTCGTCACCTTTGTCGTCTCTCTCGCGGCCTTTTTGGTCGATGTCATCCTCTTCGTCCCTCATCTGGAATTCGGC
GCCTTCCTGACTGTCGCCGCAACCATCGTCCTGGCCATAAGCGGCATCGCCTCCTGTGCTATGCGACGTGCCGTC
GTCAGTCGCCTGGCCCACAAGCGGCGCGTCGAAGAAAATGCAGAGATGAGCGGCGAAAACTATAACCTGAATTCC
ATGTCAAAGCCGTCCTTTACGTCGTCGACGGAACCCACGTTGCCCGTGGTTGGCAGCGTCATGTCGACTGTCGAC
ACTAAGCCCCAGTTCGCCGCATTCGAGTACCCCAACAAGGCGGACCGGGCCAGCGACGACATGGCGCTCTCGTCG
CCTACGCTGCCGCAGTATTCCACGGTCAACAACATGTACGGAGACCGCCCTCCAGTCAGGGCCGGCATGGCCCCC
GCCGGGGCATTCGGGGTGGGCGGATCCCCGATGCGCGGTAGGGGGGGATTCGGCTCACCGCCCGGGCGGGGCGGT
TTCTCCTCGCCCGCCAGGGGAGGCTCCGGATCGCCGGGCAGAGGGGGTGTTGGCCTGCCTAATAGAGTCAGTCCT
CGCGGAGGGGCCCCGCCAATGGGCCCGCCTCGCGGAGCCGTCGGAGCTCGTGGGGGACGCGGCGGCGCCCAAGGC
TTCGGCAACGCCACCAGGCAGTACGACGCCAGCCCGCCGTACGGACAAGTGCCGTTAAGTCCCAGGAGCACCGGC
TCGGGGCGAAGTAGATACGGCAGCCTCGCCAGGGCGGAGTCGCCGCCGCCTTTCCGGGGAAGGATGGCGTCAGAG
GAGAGCAGATACAGCGATGAAGGCGCCTATGTGCCGCCGCGTGCGGGCTGGAACAACCGACAGGAATCAAGAGGG
CCCGACGGAGGAGAGTTTGACGTCTATTCGCTCTACGGAGAGCAAGAGCAGCAGTACCACGGCGACGGACCTATG
ACGAGGACGCGCAGCCCCGCCGAGTCGGAGCGGTCCGGGTTGACGTCGATATCGCAGAGGGGCGTCAACCCGCGG
TGGAGAGGTCAGGCGCCGCCTCGGCGGCCGTCAAATGCGGGCCTGGTGCCACGTGGACTGGCACCGCAGAAGCCA
CTGCGTCGGCCGGACGTGCTGCTGGACAACCCGGACTTTGCACTGGGGGGCGGCGGCGGAGGCGCGCGGCGAGGA
GGATTGGGCATGACGCCTGGAAGTGCGTACCCGACAACAGCCTTT
Transcript >Ophio5|2303
ATGGTTCGCCCGTCGACGCCCTTGTCGGTGCTGCTGTTCGCCGCTTTTGCCCTGCTGCTCGCTTCCACCATTTCG
GTCCCCATAGTTAAGGTTATTTCTCTGGCCTCGTTCAAAGGCGTCAACTTTGGCGCCTTGGGCTTTTGCAGAGGT
GACAGCTGCAGCCTGAGCCTTGGATTGAATTCCGCCGCCCTGCTTGACAATCAGAACCAGGCCTTTAAGCTGCCG
CCCAACGCACGGGATGGCATTTCCTTCGCCCTCATCCTACATCCCGTTGCCACCGCCCTCGCCCTCGCCATAACA
ATCATGTCCATCGCCTCTCATCTCCATTCTCTAGCCCACTCGGTCCGATACCTACTAATCCTCTTTGTCCTCATC
TTCGTCACCTTTGTCGTCTCTCTCGCGGCCTTTTTGGTCGATGTCATCCTCTTCGTCCCTCATCTGGAATTCGGC
GCCTTCCTGACTGTCGCCGCAACCATCGTCCTGGCCATAAGCGGCATCGCCTCCTGTGCTATGCGACGTGCCGTC
GTCAGTCGCCTGGCCCACAAGCGGCGCGTCGAAGAAAATGCAGAGATGAGCGGCGAAAACTATAACCTGAATTCC
ATGTCAAAGCCGTCCTTTACGTCGTCGACGGAACCCACGTTGCCCGTGGTTGGCAGCGTCATGTCGACTGTCGAC
ACTAAGCCCCAGTTCGCCGCATTCGAGTACCCCAACAAGGCGGACCGGGCCAGCGACGACATGGCGCTCTCGTCG
CCTACGCTGCCGCAGTATTCCACGGTCAACAACATGTACGGAGACCGCCCTCCAGTCAGGGCCGGCATGGCCCCC
GCCGGGGCATTCGGGGTGGGCGGATCCCCGATGCGCGGTAGGGGGGGATTCGGCTCACCGCCCGGGCGGGGCGGT
TTCTCCTCGCCCGCCAGGGGAGGCTCCGGATCGCCGGGCAGAGGGGGTGTTGGCCTGCCTAATAGAGTCAGTCCT
CGCGGAGGGGCCCCGCCAATGGGCCCGCCTCGCGGAGCCGTCGGAGCTCGTGGGGGACGCGGCGGCGCCCAAGGC
TTCGGCAACGCCACCAGGCAGTACGACGCCAGCCCGCCGTACGGACAAGTGCCGTTAAGTCCCAGGAGCACCGGC
TCGGGGCGAAGTAGATACGGCAGCCTCGCCAGGGCGGAGTCGCCGCCGCCTTTCCGGGGAAGGATGGCGTCAGAG
GAGAGCAGATACAGCGATGAAGGCGCCTATGTGCCGCCGCGTGCGGGCTGGAACAACCGACAGGAATCAAGAGGG
CCCGACGGAGGAGAGTTTGACGTCTATTCGCTCTACGGAGAGCAAGAGCAGCAGTACCACGGCGACGGACCTATG
ACGAGGACGCGCAGCCCCGCCGAGTCGGAGCGGTCCGGGTTGACGTCGATATCGCAGAGGGGCGTCAACCCGCGG
TGGAGAGGTCAGGCGCCGCCTCGGCGGCCGTCAAATGCGGGCCTGGTGCCACGTGGACTGGCACCGCAGAAGCCA
CTGCGTCGGCCGGACGTGCTGCTGGACAACCCGGACTTTGCACTGGGGGGCGGCGGCGGAGGCGCGCGGCGAGGA
GGATTGGGCATGACGCCTGGAAGTGCGTACCCGACAACAGCCTTTTAG
Gene >Ophio5|2303
ATGGTTCGCCCGTCGACGCCCTTGTCGGTGCTGCTGTTCGCCGCTTTTGCCCTGCTGCTCGCTTCCACCATTTCG
GTCCCCATAGTTAAGGTTATTTCTCTGGCCTCGTTCAAAGGCGTCAACTTTGGCGCCTTGGGCTTTTGCAGAGGT
GACAGCTGCAGCCTGAGCCTTGGATTGAATTCCGGTATGCTCCCCGCCAGATCTAGTCCTCGACTTTTGTCTGAC
CTGTGTTGCTTCAGCCGCCCTGCTTGACAATCAGAACCAGGCCTTTAAGCTGCCGCCCAACGCACGGGATGGCAT
TTCCTTCGCCCTCATCCTACATCCCGTTGCCACCGCCCTCGCCCTCGCCATAACAATCATGTCCATCGCCTCTCA
TCTCCATTCTCTAGCCCACTCGGTCCGATACCTACTAATCCTCTTTGTCCTCATCTTCGTCACCTTTGTCGTCTC
TCTCGCGGCCTTTTTGGTCGATGTCATCCTCTTCGTCCCTCATCTGGAATTCGGCGCCTTCCTGACTGTCGCCGC
AACCATCGTCCTGGCCATAAGCGGCATCGCCTCCTGTGCTATGCGACGTGCCGTCGTCAGTCGCCTGGCCCACAA
GCGGCGCGTCGAAGAAAATGCAGAGATGAGCGGCGAAAACTATAACCTGAATTCCATGTCAAAGCCGTCCTTTAC
GTCGTCGACGGAACCCACGTTGCCCGTGGTTGGCAGCGTCATGTCGACTGTCGACACTAAGCCCCAGTTCGCCGC
ATTCGAGTACCCCAACAAGGCGGACCGGGCCAGCGACGACATGGCGCTCTCGTCGCCTACGCTGCCGCAGTATTC
CACGGTCAACAACATGTACGGAGACCGCCCTCCAGTCAGGGCCGGCATGGCCCCCGCCGGGGCATTCGGGGTGGG
CGGATCCCCGATGCGCGGTAGGGGGGGATTCGGCTCACCGCCCGGGCGGGGCGGTTTCTCCTCGCCCGCCAGGGG
AGGCTCCGGATCGCCGGGCAGAGGGGGTGTTGGCCTGCCTAATAGAGTCAGTCCTCGCGGAGGGGCCCCGCCAAT
GGGCCCGCCTCGCGGAGCCGTCGGAGCTCGTGGGGGACGCGGCGGCGCCCAAGGCTTCGGCAACGCCACCAGGCA
GTACGACGCCAGCCCGCCGTACGGACAAGTGCCGTTAAGTCCCAGGAGCACCGGCTCGGGGCGAAGTAGATACGG
CAGCCTCGCCAGGGCGGAGTCGCCGCCGCCTTTCCGGGGAAGGATGGCGTCAGAGGAGAGCAGATACAGCGATGA
AGGGTAAGGGCCCTCCCCCCCTCCCCCCCCTTTCTTGGTCGAGACGAATTTTGACGCGAGGCCGGCTGTAGCGCC
TATGTGCCGCCGCGTGCGGGCTGGAACAACCGACAGGAATCAAGAGGGCCCGACGGAGGAGAGTTTGACGTCTAT
TCGCTCTACGGAGAGCAAGAGCAGCAGTACCACGGCGACGGACCTATGACGAGGACGCGCAGCCCCGCCGAGTCG
GAGCGGTCCGGGTTGACGTCGATATCGCAGAGGGGCGTCAACCCGCGGTGGAGAGGTCAGGCGCCGCCTCGGCGG
CCGTCAAATGCGGGCCTGGTGCCACGTGGACTGGCACCGCAGAAGCCACTGCGTCGGCCGGACGTGCTGCTGGAC
AACCCGGACTTTGCACTGGGGGGCGGCGGCGGAGGCGCGCGGCGAGGAGGATTGGGCATGACGCCTGGAAGTGCG
TACCCGACAACAGCCTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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