Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2302
Gene name
Locationscaffold_197:7192..7684
Strand-
Gene length (bp)492
Transcript length (bp)351
Coding sequence length (bp)348
Protein length (aa) 116

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 15 33 18

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2302
MGSPSGPKPRATCVLQQSLFTSLAVPSGFFFCWKKKGKKKSIYAQNSTSDAPILLQQWSHALWTRQFRPDPPRLA
NGNLILPLTAASISDARRLVLVPSVCFATKETDDKKQHTLL
Coding >Ophio5|2302
ATGGGCTCCCCTTCTGGTCCGAAGCCACGGGCAACATGTGTCTTGCAACAGTCATTGTTCACCTCACTCGCTGTT
CCTTCGGGATTTTTCTTTTGTTGGAAAAAAAAAGGAAAAAAGAAAAGCATATATGCGCAAAATTCTACGAGCGAT
GCACCGATCCTTCTGCAGCAGTGGAGCCACGCCCTCTGGACTCGCCAGTTCAGACCAGATCCTCCGCGGTTAGCC
AACGGAAACTTGATCCTACCTTTGACAGCCGCATCCATCTCAGACGCCCGCCGTCTTGTCCTCGTCCCCTCGGTC
TGTTTCGCGACCAAGGAAACAGACGACAAGAAACAGCACACGCTTCTT
Transcript >Ophio5|2302
ATGGGCTCCCCTTCTGGTCCGAAGCCACGGGCAACATGTGTCTTGCAACAGTCATTGTTCACCTCACTCGCTGTT
CCTTCGGGATTTTTCTTTTGTTGGAAAAAAAAAGGAAAAAAGAAAAGCATATATGCGCAAAATTCTACGAGCGAT
GCACCGATCCTTCTGCAGCAGTGGAGCCACGCCCTCTGGACTCGCCAGTTCAGACCAGATCCTCCGCGGTTAGCC
AACGGAAACTTGATCCTACCTTTGACAGCCGCATCCATCTCAGACGCCCGCCGTCTTGTCCTCGTCCCCTCGGTC
TGTTTCGCGACCAAGGAAACAGACGACAAGAAACAGCACACGCTTCTTTAG
Gene >Ophio5|2302
ATGGGCTCCCCTTCTGGTCCGAAGCCACGGGCAACATGTAGTCAACCAATATCCTTTCCTCCGTCAATCAAACCT
CCTAACCAACATGGAACTTAGGTGTCTTGCAACAGTCATTGTTCACCTCACTCGCTGTTCCTTCGGGATTTTTCT
TTTGTTGGAAAAAAAAAGGAAAAAAGAAAAGCATATATGCGCAAAATTCTACGAGCGATGCACCGATCCTTCTGC
AGCAGTGGAGCCACGCCCTCTGGACTCGCCAGTTCAGACCAGATCCTCCGCGGTGAAACTTGATTCAAAAGTCTT
GATTCAAGCCCAGAGCAATCGGAGCATTACCAAAAGCAGGATATGACTCGTCGCTCTAGGTTAGCCAACGGAAAC
TTGATCCTACCTTTGACAGCCGCATCCATCTCAGACGCCCGCCGTCTTGTCCTCGTCCCCTCGGTCTGTTTCGCG
ACCAAGGAAACAGACGACAAGAAACAGCACACGCTTCTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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