Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2295
Gene name
Locationscaffold_196:18677..20171
Strand+
Gene length (bp)1494
Transcript length (bp)1494
Coding sequence length (bp)1491
Protein length (aa) 497

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2295
MLFAQGLSTIHVRLGDVVTFLFLFGLCLLLSGLGGEQQYRAAALIELDDSITTSPSPEEDYLERLSERYGLTNQT
RWQAWRIQPSGQQDGESSLTAVGLKFASQSHKIVDLRGPKQSDLRATKLMTLPARDMARHDETNASDFLFGVSTS
YERLADGNWAVLRAWARWLTRRATESNGGGLVVMLDRATDKQLQEVDDRLHAVGLDAYLLSTDEPMSMAKRYYEL
VRIFKTYGATLAATGQRKTWFALVDDSVFFPGLTSLRQRLATHDSEDELYMGLLPGQKSRGGGVMLMTRRAVDRV
PGLPCTEAPAETPARPKRWDALLRECVEQRAGRDVHVLPVPYDHDDDDDSDDNEDNDGLSVTRPLVLRDRPHRLD
VGMAHLVTDVCGEACFMQRFLFRDDWLLVNGVSISHHPDGLKRLSHHHHHHHRRHAAQDMRLTWTGRRRLWRLLD
STSSPDGSVWQAYLKRGEASEGQGDETDEMDSIIVLIWGRRRTLGSR
Coding >Ophio5|2295
ATGCTTTTCGCTCAAGGCCTCTCCACCATTCATGTGAGGTTAGGCGATGTCGTCACATTCCTTTTCCTGTTCGGA
CTATGTCTTCTTCTCTCAGGACTCGGCGGAGAGCAGCAATACCGCGCCGCCGCCCTGATCGAGCTGGACGATAGC
ATCACGACGAGTCCATCGCCGGAAGAGGACTATCTGGAGCGGCTATCCGAACGATATGGGCTCACAAACCAGACA
CGATGGCAGGCATGGCGGATTCAGCCGTCGGGGCAGCAAGACGGAGAAAGCTCCTTGACGGCCGTGGGCCTCAAG
TTCGCCTCACAATCGCACAAGATCGTCGACCTACGCGGGCCCAAGCAGTCCGACCTCCGCGCCACCAAGCTGATG
ACGCTCCCGGCTCGAGACATGGCTCGCCACGACGAGACCAACGCATCCGACTTCTTATTCGGTGTGTCGACCAGC
TACGAGCGTCTGGCAGATGGTAACTGGGCCGTGCTGCGCGCATGGGCACGCTGGCTCACCCGACGAGCAACGGAG
AGCAACGGCGGCGGACTGGTCGTCATGCTCGATCGGGCCACGGACAAGCAGCTACAAGAAGTCGACGACAGACTG
CATGCCGTCGGCCTAGATGCCTATCTCCTCTCGACGGATGAGCCCATGTCCATGGCAAAGCGATACTACGAACTC
GTCCGCATCTTCAAGACGTACGGCGCCACGCTGGCAGCGACGGGCCAGCGGAAGACGTGGTTCGCCCTCGTCGAC
GACTCCGTCTTCTTCCCCGGATTGACGTCGCTCCGTCAACGTCTGGCGACGCACGACTCCGAAGACGAGCTCTAC
ATGGGCCTCCTCCCCGGACAGAAGAGTCGGGGAGGCGGCGTGATGCTCATGACGCGTCGCGCCGTCGACCGCGTC
CCCGGTCTGCCCTGCACCGAAGCCCCGGCTGAGACGCCCGCTAGGCCCAAGCGATGGGACGCCCTGCTGAGGGAG
TGCGTCGAACAACGCGCCGGCCGAGACGTGCATGTCTTACCGGTCCCGTACGACCATGATGATGACGACGATAGC
GACGACAATGAAGACAATGATGGATTGTCCGTCACGCGGCCTCTCGTCCTGCGCGACCGCCCCCATCGCTTGGAC
GTCGGAATGGCCCACCTGGTAACAGACGTCTGCGGCGAGGCGTGCTTCATGCAGCGCTTTCTCTTCCGCGACGAC
TGGCTTCTCGTCAACGGCGTCTCCATCAGCCATCATCCCGACGGCCTCAAGCGCCTTAGCCACCACCACCACCAC
CACCACCGTCGTCACGCAGCACAGGACATGCGTCTCACCTGGACGGGACGACGCAGGCTGTGGCGTCTGCTGGAC
TCTACCTCTAGCCCGGACGGCTCCGTATGGCAGGCTTACCTCAAGAGGGGCGAGGCCTCGGAAGGACAAGGCGAT
GAGACGGATGAGATGGACTCGATCATTGTGCTGATTTGGGGGCGCCGACGTACCCTGGGCTCACGC
Transcript >Ophio5|2295
ATGCTTTTCGCTCAAGGCCTCTCCACCATTCATGTGAGGTTAGGCGATGTCGTCACATTCCTTTTCCTGTTCGGA
CTATGTCTTCTTCTCTCAGGACTCGGCGGAGAGCAGCAATACCGCGCCGCCGCCCTGATCGAGCTGGACGATAGC
ATCACGACGAGTCCATCGCCGGAAGAGGACTATCTGGAGCGGCTATCCGAACGATATGGGCTCACAAACCAGACA
CGATGGCAGGCATGGCGGATTCAGCCGTCGGGGCAGCAAGACGGAGAAAGCTCCTTGACGGCCGTGGGCCTCAAG
TTCGCCTCACAATCGCACAAGATCGTCGACCTACGCGGGCCCAAGCAGTCCGACCTCCGCGCCACCAAGCTGATG
ACGCTCCCGGCTCGAGACATGGCTCGCCACGACGAGACCAACGCATCCGACTTCTTATTCGGTGTGTCGACCAGC
TACGAGCGTCTGGCAGATGGTAACTGGGCCGTGCTGCGCGCATGGGCACGCTGGCTCACCCGACGAGCAACGGAG
AGCAACGGCGGCGGACTGGTCGTCATGCTCGATCGGGCCACGGACAAGCAGCTACAAGAAGTCGACGACAGACTG
CATGCCGTCGGCCTAGATGCCTATCTCCTCTCGACGGATGAGCCCATGTCCATGGCAAAGCGATACTACGAACTC
GTCCGCATCTTCAAGACGTACGGCGCCACGCTGGCAGCGACGGGCCAGCGGAAGACGTGGTTCGCCCTCGTCGAC
GACTCCGTCTTCTTCCCCGGATTGACGTCGCTCCGTCAACGTCTGGCGACGCACGACTCCGAAGACGAGCTCTAC
ATGGGCCTCCTCCCCGGACAGAAGAGTCGGGGAGGCGGCGTGATGCTCATGACGCGTCGCGCCGTCGACCGCGTC
CCCGGTCTGCCCTGCACCGAAGCCCCGGCTGAGACGCCCGCTAGGCCCAAGCGATGGGACGCCCTGCTGAGGGAG
TGCGTCGAACAACGCGCCGGCCGAGACGTGCATGTCTTACCGGTCCCGTACGACCATGATGATGACGACGATAGC
GACGACAATGAAGACAATGATGGATTGTCCGTCACGCGGCCTCTCGTCCTGCGCGACCGCCCCCATCGCTTGGAC
GTCGGAATGGCCCACCTGGTAACAGACGTCTGCGGCGAGGCGTGCTTCATGCAGCGCTTTCTCTTCCGCGACGAC
TGGCTTCTCGTCAACGGCGTCTCCATCAGCCATCATCCCGACGGCCTCAAGCGCCTTAGCCACCACCACCACCAC
CACCACCGTCGTCACGCAGCACAGGACATGCGTCTCACCTGGACGGGACGACGCAGGCTGTGGCGTCTGCTGGAC
TCTACCTCTAGCCCGGACGGCTCCGTATGGCAGGCTTACCTCAAGAGGGGCGAGGCCTCGGAAGGACAAGGCGAT
GAGACGGATGAGATGGACTCGATCATTGTGCTGATTTGGGGGCGCCGACGTACCCTGGGCTCACGCTGA
Gene >Ophio5|2295
ATGCTTTTCGCTCAAGGCCTCTCCACCATTCATGTGAGGTTAGGCGATGTCGTCACATTCCTTTTCCTGTTCGGA
CTATGTCTTCTTCTCTCAGGACTCGGCGGAGAGCAGCAATACCGCGCCGCCGCCCTGATCGAGCTGGACGATAGC
ATCACGACGAGTCCATCGCCGGAAGAGGACTATCTGGAGCGGCTATCCGAACGATATGGGCTCACAAACCAGACA
CGATGGCAGGCATGGCGGATTCAGCCGTCGGGGCAGCAAGACGGAGAAAGCTCCTTGACGGCCGTGGGCCTCAAG
TTCGCCTCACAATCGCACAAGATCGTCGACCTACGCGGGCCCAAGCAGTCCGACCTCCGCGCCACCAAGCTGATG
ACGCTCCCGGCTCGAGACATGGCTCGCCACGACGAGACCAACGCATCCGACTTCTTATTCGGTGTGTCGACCAGC
TACGAGCGTCTGGCAGATGGTAACTGGGCCGTGCTGCGCGCATGGGCACGCTGGCTCACCCGACGAGCAACGGAG
AGCAACGGCGGCGGACTGGTCGTCATGCTCGATCGGGCCACGGACAAGCAGCTACAAGAAGTCGACGACAGACTG
CATGCCGTCGGCCTAGATGCCTATCTCCTCTCGACGGATGAGCCCATGTCCATGGCAAAGCGATACTACGAACTC
GTCCGCATCTTCAAGACGTACGGCGCCACGCTGGCAGCGACGGGCCAGCGGAAGACGTGGTTCGCCCTCGTCGAC
GACTCCGTCTTCTTCCCCGGATTGACGTCGCTCCGTCAACGTCTGGCGACGCACGACTCCGAAGACGAGCTCTAC
ATGGGCCTCCTCCCCGGACAGAAGAGTCGGGGAGGCGGCGTGATGCTCATGACGCGTCGCGCCGTCGACCGCGTC
CCCGGTCTGCCCTGCACCGAAGCCCCGGCTGAGACGCCCGCTAGGCCCAAGCGATGGGACGCCCTGCTGAGGGAG
TGCGTCGAACAACGCGCCGGCCGAGACGTGCATGTCTTACCGGTCCCGTACGACCATGATGATGACGACGATAGC
GACGACAATGAAGACAATGATGGATTGTCCGTCACGCGGCCTCTCGTCCTGCGCGACCGCCCCCATCGCTTGGAC
GTCGGAATGGCCCACCTGGTAACAGACGTCTGCGGCGAGGCGTGCTTCATGCAGCGCTTTCTCTTCCGCGACGAC
TGGCTTCTCGTCAACGGCGTCTCCATCAGCCATCATCCCGACGGCCTCAAGCGCCTTAGCCACCACCACCACCAC
CACCACCGTCGTCACGCAGCACAGGACATGCGTCTCACCTGGACGGGACGACGCAGGCTGTGGCGTCTGCTGGAC
TCTACCTCTAGCCCGGACGGCTCCGTATGGCAGGCTTACCTCAAGAGGGGCGAGGCCTCGGAAGGACAAGGCGAT
GAGACGGATGAGATGGACTCGATCATTGTGCTGATTTGGGGGCGCCGACGTACCCTGGGCTCACGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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