Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2294
Gene name
Location	scaffold_196:16694..17789
Strand	+
Gene length (bp)	1095
Transcript length (bp)	1038
Coding sequence length (bp)	1035
Protein length (aa)	345

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF18142	SLATT_fungal	SMODS and SLOG-associating 2TM effector domain	1.7E-24	166	266

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Golgi apparatus	Signal peptide	0.2619	0.2112	0.1556	0.1651	0.1225	0.0391	0.3724	0.1543	0.4133	0.0604

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	163	185	22
2	195	217	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	5.90	1.55	10.24
CcL	In ants, during behavior modification	0.23	0.00	0.66
CcD	In ants, recently dead	0.86	0.00	1.88

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.059640	no
SC16a	CcD	0.001851	yes
CcL	CcD	1.000000	no

Orthologs

Orthofinder run ID	4
Orthogroup	669
Change Orthofinder run

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2\|5825
Ophiocordyceps australis map64 (Brazil)	OphauB2\|1271
Ophiocordyceps camponoti-floridani	Ophcf2\|04057
Ophiocordyceps camponoti-rufipedis	Ophun1\|2152
Ophiocordyceps kimflemingae	Ophio5\|2294 (this protein)
Ophiocordyceps subramaniannii	Hirsu2\|10885
Ophiocordyceps subramaniannii	Hirsu2\|1635

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2294 MASHPQSIPPEQHYLLSQHSPRLPFLNCTLPQLDTSPPCRFPSEDIRSVGAQRPRSREQPMSKQAKAIDLPVLSP DPVEADGRDGAAKASESGATQPPADAVGPGPGAQWHAHGFPAVSRHRFLTSAEWTTIATGIGGVSDVEGHKPVHP TSSLWPPRGMPRGLVVRWGLMVGQLLIGAAVTSLGPMSMKDGTPITILGAINTVVAGLLALLHNSGLPDRYRYDM AQFEELEDRIKEVLDSGIAPIDMTTDQVLAECFDLFRMAKATVTANMPVSYNAGKLLQSSAGSAEPKAPGPMAEP GMSASAPRTSAAAASAARMSASAAPRVSASSPADSPAVGGADKKK
Coding	>Ophio5\|2294 ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTG CTCATCGGCGCGGCCGTCACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCC ATCAACACCGTCGTCGCCGGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATG GCCCAGTTCGAAGAGCTGGAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACC GACCAGGTCCTCGCCGAGTGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGC TACAACGCGGGAAAGTTGCTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCC GGGATGAGCGCTTCTGCGCCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCC AGGGTCAGTGCTTCTTCCCCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAA
Transcript	>Ophio5\|2294 ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTG CTCATCGGCGCGGCCGTCACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCC ATCAACACCGTCGTCGCCGGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATG GCCCAGTTCGAAGAGCTGGAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACC GACCAGGTCCTCGCCGAGTGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGC TACAACGCGGGAAAGTTGCTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCC GGGATGAGCGCTTCTGCGCCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCC AGGGTCAGTGCTTCTTCCCCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAATGA
Gene	>Ophio5\|2294 ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTGTACCGCGACGTGGTGACGCGGAGGACAAAGTTC TAGTACATCTTCCACCTCATCAGCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTGCTCATCGGCGCGGCCGTC ACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCCATCAACACCGTCGTCGCC GGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATGGCCCAGTTCGAAGAGCTG GAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACCGACCAGGTCCTCGCCGAG TGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGCTACAACGCGGGAAAGTTG CTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCCGGGATGAGCGCTTCTGCG CCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCCAGGGTCAGTGCTTCTTCC CCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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