Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2294
Gene name
Locationscaffold_196:16694..17789
Strand+
Gene length (bp)1095
Transcript length (bp)1038
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18142 SLATT_fungal SMODS and SLOG-associating 2TM effector domain 1.7E-24 166 266

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

Domain # Start End Length
1 163 185 22
2 195 217 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2294
MASHPQSIPPEQHYLLSQHSPRLPFLNCTLPQLDTSPPCRFPSEDIRSVGAQRPRSREQPMSKQAKAIDLPVLSP
DPVEADGRDGAAKASESGATQPPADAVGPGPGAQWHAHGFPAVSRHRFLTSAEWTTIATGIGGVSDVEGHKPVHP
TSSLWPPRGMPRGLVVRWGLMVGQLLIGAAVTSLGPMSMKDGTPITILGAINTVVAGLLALLHNSGLPDRYRYDM
AQFEELEDRIKEVLDSGIAPIDMTTDQVLAECFDLFRMAKATVTANMPVSYNAGKLLQSSAGSAEPKAPGPMAEP
GMSASAPRTSAAAASAARMSASAAPRVSASSPADSPAVGGADKKK
Coding >Ophio5|2294
ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC
CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG
GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA
GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT
GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG
TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC
ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTG
CTCATCGGCGCGGCCGTCACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCC
ATCAACACCGTCGTCGCCGGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATG
GCCCAGTTCGAAGAGCTGGAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACC
GACCAGGTCCTCGCCGAGTGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGC
TACAACGCGGGAAAGTTGCTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCC
GGGATGAGCGCTTCTGCGCCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCC
AGGGTCAGTGCTTCTTCCCCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAA
Transcript >Ophio5|2294
ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC
CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG
GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA
GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT
GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG
TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC
ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTG
CTCATCGGCGCGGCCGTCACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCC
ATCAACACCGTCGTCGCCGGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATG
GCCCAGTTCGAAGAGCTGGAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACC
GACCAGGTCCTCGCCGAGTGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGC
TACAACGCGGGAAAGTTGCTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCC
GGGATGAGCGCTTCTGCGCCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCC
AGGGTCAGTGCTTCTTCCCCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAATGA
Gene >Ophio5|2294
ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC
CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG
GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA
GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT
GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG
TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC
ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTGTACCGCGACGTGGTGACGCGGAGGACAAAGTTC
TAGTACATCTTCCACCTCATCAGCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTGCTCATCGGCGCGGCCGTC
ACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCCATCAACACCGTCGTCGCC
GGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATGGCCCAGTTCGAAGAGCTG
GAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACCGACCAGGTCCTCGCCGAG
TGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGCTACAACGCGGGAAAGTTG
CTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCCGGGATGAGCGCTTCTGCG
CCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCCAGGGTCAGTGCTTCTTCC
CCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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