Protein ID | Ophio5|2294 |
Gene name | |
Location | scaffold_196:16694..17789 |
Strand | + |
Gene length (bp) | 1095 |
Transcript length (bp) | 1038 |
Coding sequence length (bp) | 1035 |
Protein length (aa) | 345 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF18142 | SLATT_fungal | SMODS and SLOG-associating 2TM effector domain | 1.7E-24 | 166 | 266 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 163 | 185 | 22 |
2 | 195 | 217 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2294 MASHPQSIPPEQHYLLSQHSPRLPFLNCTLPQLDTSPPCRFPSEDIRSVGAQRPRSREQPMSKQAKAIDLPVLSP DPVEADGRDGAAKASESGATQPPADAVGPGPGAQWHAHGFPAVSRHRFLTSAEWTTIATGIGGVSDVEGHKPVHP TSSLWPPRGMPRGLVVRWGLMVGQLLIGAAVTSLGPMSMKDGTPITILGAINTVVAGLLALLHNSGLPDRYRYDM AQFEELEDRIKEVLDSGIAPIDMTTDQVLAECFDLFRMAKATVTANMPVSYNAGKLLQSSAGSAEPKAPGPMAEP GMSASAPRTSAAAASAARMSASAAPRVSASSPADSPAVGGADKKK |
Coding | >Ophio5|2294 ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTG CTCATCGGCGCGGCCGTCACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCC ATCAACACCGTCGTCGCCGGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATG GCCCAGTTCGAAGAGCTGGAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACC GACCAGGTCCTCGCCGAGTGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGC TACAACGCGGGAAAGTTGCTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCC GGGATGAGCGCTTCTGCGCCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCC AGGGTCAGTGCTTCTTCCCCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAA |
Transcript | >Ophio5|2294 ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTG CTCATCGGCGCGGCCGTCACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCC ATCAACACCGTCGTCGCCGGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATG GCCCAGTTCGAAGAGCTGGAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACC GACCAGGTCCTCGCCGAGTGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGC TACAACGCGGGAAAGTTGCTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCC GGGATGAGCGCTTCTGCGCCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCC AGGGTCAGTGCTTCTTCCCCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAATGA |
Gene | >Ophio5|2294 ATGGCATCACACCCTCAAAGCATCCCGCCAGAACAGCATTATTTATTGTCTCAACATAGTCCTAGACTTCCTTTC CTGAACTGTACACTTCCTCAGCTCGACACCTCTCCTCCCTGCAGGTTTCCGTCTGAGGATATTCGTTCGGTCGGG GCACAGCGACCCCGTTCTCGCGAGCAGCCCATGTCGAAACAAGCCAAGGCCATAGACCTGCCTGTTCTTTCACCA GACCCCGTCGAAGCCGACGGACGGGACGGGGCGGCGAAAGCGAGCGAAAGCGGGGCCACACAGCCGCCGGCCGAT GCCGTCGGGCCCGGGCCGGGCGCTCAATGGCACGCTCACGGGTTCCCCGCCGTGTCGCGCCATCGGTTCTTGACG TCGGCGGAATGGACGACCATCGCCACGGGCATCGGCGGCGTCAGCGATGTTGAGGGCCACAAGCCGGTCCATCCC ACGAGCTCGTTGTGGCCGCCTCGGGGCATGCCGCGAGGCCTGTACCGCGACGTGGTGACGCGGAGGACAAAGTTC TAGTACATCTTCCACCTCATCAGCGTGGTCCGCTGGGGTCTGATGGTCGGCCAGCTGCTCATCGGCGCGGCCGTC ACGTCTCTGGGCCCCATGTCGATGAAGGACGGGACGCCCATCACGATTCTCGGCGCCATCAACACCGTCGTCGCC GGCCTGCTCGCCCTGCTGCACAACAGCGGCCTTCCTGATCGGTACCGTTACGACATGGCCCAGTTCGAAGAGCTG GAGGACCGCATCAAGGAGGTTCTCGATTCGGGCATCGCCCCCATCGACATGACTACCGACCAGGTCCTCGCCGAG TGCTTCGACCTGTTCCGCATGGCGAAAGCGACCGTCACGGCCAATATGCCTGTCAGCTACAACGCGGGAAAGTTG CTGCAGTCGAGCGCCGGCAGCGCCGAGCCGAAGGCACCCGGGCCCATGGCCGAGCCCGGGATGAGCGCTTCTGCG CCCAGGACGAGTGCTGCTGCCGCCTCTGCTGCCAGGATGAGCGCTTCCGCCGCGCCCAGGGTCAGTGCTTCTTCC CCGGCTGACTCTCCGGCCGTTGGCGGGGCCGACAAGAAGAAATGA |