Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2269
Gene name
Locationscaffold_194:18129..19004
Strand+
Gene length (bp)875
Transcript length (bp)816
Coding sequence length (bp)813
Protein length (aa) 271

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 4 21 17
2 65 87 22
3 102 124 22
4 144 166 22
5 206 223 17
6 235 257 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2269
MVLLTLLSLLQAFLAVVGIAWKASQGYALAELPNLARLFDPSCWLSNWLEDLGGVSPASLRDSWPWFSLHLFLYL
GQLIPFAAIIEIKSPLPEKKFRAVTVLAILSAILGFAAAMPVVSLWIFWADERPCKRLSRGQRSALRTLAFFSTL
THVGAFLIALTAAWLGLVFSPWHVMNSLLSVPTPGHAGLSESSIRQARLRQINEMTGTSSGFFMAAGILLLVLES
CRRRVTPGLVTWMFLVSLVAGPATGSAAVILLADEVTADETQSKGA
Coding >Ophio5|2269
ATGGTATTGCTCACGCTATTGAGCCTACTACAGGCGTTTCTGGCAGTCGTCGGTATTGCCTGGAAGGCGAGTCAA
GGGTACGCTCTCGCAGAGTTGCCGAATCTGGCCCGTCTCTTCGACCCGAGCTGCTGGCTGTCCAACTGGCTCGAG
GATCTGGGAGGCGTTTCCCCGGCTTCACTGAGAGACAGTTGGCCCTGGTTCTCTCTCCACTTGTTTCTCTATCTC
GGCCAGCTCATTCCCTTTGCCGCCATCATCGAGATTAAATCGCCACTTCCGGAGAAGAAGTTCAGAGCCGTTACG
GTGCTGGCCATTCTCTCGGCCATCTTGGGCTTCGCTGCCGCCATGCCAGTCGTCTCGCTGTGGATCTTCTGGGCA
GATGAGCGACCATGTAAGCGCCTCAGTCGGGGTCAAAGATCTGCACTTCGGACTTTGGCTTTCTTCTCAACCTTG
ACACATGTCGGGGCCTTTTTGATCGCCTTAACTGCAGCTTGGCTTGGCCTCGTCTTCAGTCCATGGCACGTCATG
AACAGCCTGCTATCGGTACCGACACCTGGTCATGCTGGCCTCTCTGAATCGAGCATCCGCCAGGCTCGTCTGCGA
CAGATAAACGAGATGACGGGAACTTCAAGCGGCTTCTTCATGGCGGCCGGCATCCTGCTGCTCGTGCTTGAGTCC
TGTCGCCGCAGAGTGACCCCAGGGCTTGTGACGTGGATGTTTCTTGTCAGTTTGGTCGCCGGACCTGCAACCGGC
AGCGCGGCTGTGATACTGCTTGCGGATGAGGTTACGGCGGATGAGACACAAAGCAAAGGTGCT
Transcript >Ophio5|2269
ATGGTATTGCTCACGCTATTGAGCCTACTACAGGCGTTTCTGGCAGTCGTCGGTATTGCCTGGAAGGCGAGTCAA
GGGTACGCTCTCGCAGAGTTGCCGAATCTGGCCCGTCTCTTCGACCCGAGCTGCTGGCTGTCCAACTGGCTCGAG
GATCTGGGAGGCGTTTCCCCGGCTTCACTGAGAGACAGTTGGCCCTGGTTCTCTCTCCACTTGTTTCTCTATCTC
GGCCAGCTCATTCCCTTTGCCGCCATCATCGAGATTAAATCGCCACTTCCGGAGAAGAAGTTCAGAGCCGTTACG
GTGCTGGCCATTCTCTCGGCCATCTTGGGCTTCGCTGCCGCCATGCCAGTCGTCTCGCTGTGGATCTTCTGGGCA
GATGAGCGACCATGTAAGCGCCTCAGTCGGGGTCAAAGATCTGCACTTCGGACTTTGGCTTTCTTCTCAACCTTG
ACACATGTCGGGGCCTTTTTGATCGCCTTAACTGCAGCTTGGCTTGGCCTCGTCTTCAGTCCATGGCACGTCATG
AACAGCCTGCTATCGGTACCGACACCTGGTCATGCTGGCCTCTCTGAATCGAGCATCCGCCAGGCTCGTCTGCGA
CAGATAAACGAGATGACGGGAACTTCAAGCGGCTTCTTCATGGCGGCCGGCATCCTGCTGCTCGTGCTTGAGTCC
TGTCGCCGCAGAGTGACCCCAGGGCTTGTGACGTGGATGTTTCTTGTCAGTTTGGTCGCCGGACCTGCAACCGGC
AGCGCGGCTGTGATACTGCTTGCGGATGAGGTTACGGCGGATGAGACACAAAGCAAAGGTGCTTAA
Gene >Ophio5|2269
ATGGTATTGCTCACGCTATTGAGCCTACTACAGGCGTTTCTGGCAGTCGTCGGTATTGCCTGGAAGGCGAGTCAA
GGGTACGCTCTCGCAGAGTTGCCGAATCTGGCCCGTCTCTTCGACCCGAGCTGCTGGCTGTCCAACTGGCTCGAG
GATCTGGGAGGCGTTTCCCCGGCTTCACTGAGAGACAGTTGGCCCTGGTTCTCTCTCCACTTGTTTCTCTATCTC
GGCCAGCTCATTCCCTTTGCCGCCATCATCGAGATTAAATCGCCACTTCCGGAGAAGAAGTTCAGGTGGGTCAAA
CCAGCGGTGGATGGGTCTTATGCCTCATCTCAGCTGAGTCTCCTTCAAGAGCCGTTACGGTGCTGGCCATTCTCT
CGGCCATCTTGGGCTTCGCTGCCGCCATGCCAGTCGTCTCGCTGTGGATCTTCTGGGCAGATGAGCGACCATGTA
AGCGCCTCAGTCGGGGTCAAAGATCTGCACTTCGGACTTTGGCTTTCTTCTCAACCTTGACACATGTCGGGGCCT
TTTTGATCGCCTTAACTGCAGCTTGGCTTGGCCTCGTCTTCAGTCCATGGCACGTCATGAACAGCCTGCTATCGG
TACCGACACCTGGTCATGCTGGCCTCTCTGAATCGAGCATCCGCCAGGCTCGTCTGCGACAGATAAACGAGATGA
CGGGAACTTCAAGCGGCTTCTTCATGGCGGCCGGCATCCTGCTGCTCGTGCTTGAGTCCTGTCGCCGCAGAGTGA
CCCCAGGGCTTGTGACGTGGATGTTTCTTGTCAGTTTGGTCGCCGGACCTGCAACCGGCAGCGCGGCTGTGATAC
TGCTTGCGGATGAGGTTACGGCGGATGAGACACAAAGCAAAGGTGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail