Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2259
Gene name
Locationscaffold_193:28137..28768
Strand+
Gene length (bp)631
Transcript length (bp)501
Coding sequence length (bp)498
Protein length (aa) 166

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12273 RCR Chitin synthesis regulation, resistance to Congo red 5.2E-08 32 163

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2259
MDLQNDQVPAGWVREGNFIVPWWQSRTGVLVKWIILLVLVVVFTLYVFGGYFHAKHRLKKGLPPLAYHRCLVARR
QPPPPPPPPGGDYHNAWPQQGYYGPYQPPPNGYPMNNMGAPPVYDPSRPPTYMGGPPPDGGSKVDPSQWRNEPTR
RAPEENAAPDYQPRPS
Coding >Ophio5|2259
ATGGATTTGCAGAACGATCAGGTCCCGGCTGGCTGGGTGCGTGAGGGCAATTTTATCGTGCCGTGGTGGCAGAGC
AGGACGGGCGTCCTGGTCAAATGGATCATCCTTCTCGTCCTCGTCGTCGTCTTTACCCTCTACGTCTTTGGTGGT
TATTTTCATGCCAAGCACAGGCTCAAGAAGGGCCTCCCGCCGCTGGCGTATCATCGATGTCTCGTCGCCAGACGA
CAGCCTCCTCCTCCTCCTCCTCCGCCGGGCGGTGATTACCACAACGCCTGGCCACAGCAGGGCTATTACGGTCCT
TACCAACCGCCGCCCAACGGATACCCCATGAACAACATGGGCGCGCCGCCCGTCTACGATCCCTCTCGTCCACCG
ACGTACATGGGCGGCCCGCCGCCTGATGGTGGCTCCAAGGTCGACCCCTCGCAGTGGAGGAATGAACCCACGCGG
CGGGCGCCCGAGGAAAACGCCGCGCCCGACTATCAGCCCCGGCCGTCA
Transcript >Ophio5|2259
ATGGATTTGCAGAACGATCAGGTCCCGGCTGGCTGGGTGCGTGAGGGCAATTTTATCGTGCCGTGGTGGCAGAGC
AGGACGGGCGTCCTGGTCAAATGGATCATCCTTCTCGTCCTCGTCGTCGTCTTTACCCTCTACGTCTTTGGTGGT
TATTTTCATGCCAAGCACAGGCTCAAGAAGGGCCTCCCGCCGCTGGCGTATCATCGATGTCTCGTCGCCAGACGA
CAGCCTCCTCCTCCTCCTCCTCCGCCGGGCGGTGATTACCACAACGCCTGGCCACAGCAGGGCTATTACGGTCCT
TACCAACCGCCGCCCAACGGATACCCCATGAACAACATGGGCGCGCCGCCCGTCTACGATCCCTCTCGTCCACCG
ACGTACATGGGCGGCCCGCCGCCTGATGGTGGCTCCAAGGTCGACCCCTCGCAGTGGAGGAATGAACCCACGCGG
CGGGCGCCCGAGGAAAACGCCGCGCCCGACTATCAGCCCCGGCCGTCATGA
Gene >Ophio5|2259
ATGGATTTGCAGAACGATCAGGTCCCGGCTGGCTGGGTGCGTGAGGGCAATTTTATCGTGCCGTGGTGGCAGAGC
AGGGTGAGTGGCCGACGACGTTGATGAGAGACTTCCATCCATGCACTTTACTGATGAGATTGAGCAGACGGGCGT
CCTGGTCAAATGGATCATCCTTCTCGTCCTCGTCGTCGTCTTTACCCTCTACGTCTTTGGTGGTTATTTTCATGC
CAAGCACAGGCTCAAGAAGGGCCTCCCGCCGCTGGCGTATCATCGAGTGAGCCATCCATTATACCAGTCCTTGTC
TTTCCTTCTGCTAATCGGGGCTTTCTTTCCCCTCCAGTGTCTCGTCGCCAGACGACAGCCTCCTCCTCCTCCTCC
TCCGCCGGGCGGTGATTACCACAACGCCTGGCCACAGCAGGGCTATTACGGTCCTTACCAACCGCCGCCCAACGG
ATACCCCATGAACAACATGGGCGCGCCGCCCGTCTACGATCCCTCTCGTCCACCGACGTACATGGGCGGCCCGCC
GCCTGATGGTGGCTCCAAGGTCGACCCCTCGCAGTGGAGGAATGAACCCACGCGGCGGGCGCCCGAGGAAAACGC
CGCGCCCGACTATCAGCCCCGGCCGTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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