Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2254
Gene name
Locationscaffold_193:13124..15237
Strand+
Gene length (bp)2113
Transcript length (bp)1956
Coding sequence length (bp)1953
Protein length (aa) 651

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05277 DUF726 Protein of unknown function (DUF726) 3.3E-107 277 634

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US10|YK68_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 174 635 6.0E-69
sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 213 635 2.0E-56
sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 213 635 2.0E-54
sp|Q499U8|TMCO4_RAT Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 199 635 3.0E-53
sp|O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 195 629 2.0E-48
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US10|YK68_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC607.08c PE=3 SV=1 174 635 6.0E-69
sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4 OS=Mus musculus GN=Tmco4 PE=2 SV=2 213 635 2.0E-56
sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4 OS=Homo sapiens GN=TMCO4 PE=2 SV=1 213 635 2.0E-54
sp|Q499U8|TMCO4_RAT Transmembrane and coiled-coil domain-containing protein 4 OS=Rattus norvegicus GN=Tmco4 PE=2 SV=1 199 635 3.0E-53
sp|O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.13c PE=3 SV=1 195 629 2.0E-48
sp|Q20035|TMCO4_CAEEL Uncharacterized membrane protein F35D11.3 OS=Caenorhabditis elegans GN=F35D11.3 PE=3 SV=2 205 634 4.0E-45
sp|P43564|YFD4_YEAST Uncharacterized membrane protein YFL034W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YFL034W PE=1 SV=2 204 635 2.0E-40
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

Domain # Start End Length
1 285 307 22
2 322 344 22
3 461 483 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2254
MAPLCADPRQVVIALDVTQRLSLLQLVQDITSYMISQLEAPTDQLGPVSPGEENDGVGGGTGPSLDAQQQKLTSI
EKPTQEASTGKVAQETSSDKPPQEAATNNPPHKPSIGRAAQDAKSIQLAAMDNLRQWRDEFLPRLRDIAEVKDSS
AIEAERQARREKLKKEDAETTESSSPEDVTQLQSLYRPMPTPLTELPPQDRREALTCTLLLLLATGKYSAHSRAL
MLYLASALALPPTFVNEQEGEIAKSLMESSNADGKENMSAEAEAAKRQEENKLSRYWKVGLASVAGAAVIGVTGG
LAAPLVAGAISGIMGGVGLGGVASFLGIFWANGALVGALFGAYGAKMTGEMMDNYAKEVEDFRFIPLDQDQQQTD
QPSEKTDKGQQQAKAEQRRLRVTIGINGWLSSESDIQKPWLVLGADSEAFALRYELKTLLGLGSALNDLVHSLAW
KTVKRELVKRTALATLLAALWPVQILAAASTSIDNPFQRARHRSRKAGRLLADALVNRVQGERPVALVGYSLGAS
AIHACLQELADRRAFGLVDSVVLIGAPAPAASDHWRALRPVVSGTIFNVYSENDLVLGLVYRLHALDYGVAGLQP
VHGVPALRNVDFSAHVTGHLRYPLLTADILRRCGFLPPQVVNTQQAGGESP
Coding >Ophio5|2254
ATGGCGCCCCTCTGCGCGGACCCGCGTCAAGTCGTCATCGCACTCGACGTTACTCAGCGCCTCTCGCTCCTCCAA
CTCGTCCAGGATATCACCTCGTACATGATATCCCAGCTCGAAGCGCCAACCGATCAGCTTGGCCCCGTCTCCCCA
GGAGAGGAAAATGATGGGGTCGGCGGCGGAACAGGGCCATCGCTTGACGCGCAGCAGCAAAAGCTGACGTCCATC
GAGAAGCCTACGCAAGAGGCGTCCACCGGCAAGGTCGCGCAAGAGACGTCATCCGACAAGCCTCCCCAAGAGGCG
GCCACCAACAACCCCCCTCATAAGCCGTCCATCGGTAGAGCTGCCCAAGATGCCAAGAGCATACAGCTAGCGGCC
ATGGATAATCTCAGGCAATGGAGAGACGAATTCCTCCCCCGACTGCGCGACATCGCCGAGGTCAAGGACAGCTCC
GCCATCGAAGCCGAGCGGCAGGCCAGGCGAGAGAAGCTGAAGAAAGAGGACGCAGAAACGACCGAGAGCAGCTCA
CCAGAAGACGTGACGCAGCTGCAGTCCCTCTACCGTCCCATGCCCACACCCCTGACCGAGCTCCCCCCGCAAGAC
AGACGCGAAGCTCTCACCTGCACCCTCCTGCTCCTCCTCGCAACGGGGAAATACTCGGCCCACTCGCGCGCCCTG
ATGCTATACCTTGCGTCCGCCCTGGCACTACCCCCCACCTTCGTCAACGAGCAAGAAGGCGAGATAGCCAAGTCG
CTTATGGAGTCTTCGAATGCAGACGGTAAGGAAAACATGTCCGCCGAGGCCGAAGCCGCCAAGCGTCAAGAGGAG
AACAAGCTCAGTCGGTACTGGAAAGTCGGCCTCGCGTCCGTGGCGGGAGCGGCCGTCATCGGCGTCACGGGCGGT
CTGGCGGCGCCGCTCGTGGCCGGCGCCATCAGCGGCATCATGGGCGGTGTCGGCCTGGGCGGAGTCGCTAGCTTT
CTCGGTATCTTCTGGGCGAATGGTGCGCTGGTCGGGGCCCTGTTTGGCGCGTACGGCGCAAAGATGACGGGCGAG
ATGATGGACAACTACGCAAAAGAAGTCGAAGACTTCCGCTTCATCCCCCTGGACCAAGACCAGCAGCAGACAGAC
CAGCCGTCAGAGAAGACAGACAAAGGCCAACAGCAAGCCAAGGCAGAGCAGCGCCGGCTCCGCGTCACCATCGGC
ATCAACGGCTGGCTCAGCTCGGAAAGCGACATCCAGAAACCCTGGCTCGTGCTCGGCGCCGACTCGGAAGCGTTC
GCTCTACGGTACGAGCTCAAGACTCTTCTCGGCCTCGGCTCGGCCCTCAACGACCTCGTCCACTCGCTCGCTTGG
AAGACGGTCAAGCGGGAACTCGTCAAGCGCACCGCCCTCGCCACCCTCCTCGCAGCATTGTGGCCCGTCCAGATC
CTGGCGGCGGCATCGACCTCCATCGACAACCCCTTTCAGCGCGCCCGTCACCGATCCCGCAAGGCGGGCCGTCTC
CTGGCCGACGCCCTCGTCAATAGAGTGCAGGGAGAGCGTCCGGTAGCCCTGGTGGGCTACTCGCTAGGCGCTTCC
GCCATACATGCATGTCTGCAGGAACTCGCCGACCGGCGCGCCTTCGGCCTCGTCGACTCCGTCGTCCTCATCGGG
GCGCCCGCCCCCGCCGCCTCGGACCATTGGCGCGCCTTGCGTCCCGTCGTGTCCGGTACCATCTTCAACGTCTAC
TCGGAGAATGACCTCGTCCTCGGCCTCGTCTATCGTTTGCATGCCCTCGATTATGGCGTCGCCGGCCTGCAGCCC
GTTCATGGTGTGCCCGCTCTTCGGAACGTAGACTTCTCCGCTCATGTTACAGGCCATTTGCGCTACCCGCTGCTG
ACGGCTGATATCCTTCGTCGCTGCGGCTTCCTCCCCCCCCAAGTTGTTAATACGCAGCAAGCAGGAGGCGAATCT
CCA
Transcript >Ophio5|2254
ATGGCGCCCCTCTGCGCGGACCCGCGTCAAGTCGTCATCGCACTCGACGTTACTCAGCGCCTCTCGCTCCTCCAA
CTCGTCCAGGATATCACCTCGTACATGATATCCCAGCTCGAAGCGCCAACCGATCAGCTTGGCCCCGTCTCCCCA
GGAGAGGAAAATGATGGGGTCGGCGGCGGAACAGGGCCATCGCTTGACGCGCAGCAGCAAAAGCTGACGTCCATC
GAGAAGCCTACGCAAGAGGCGTCCACCGGCAAGGTCGCGCAAGAGACGTCATCCGACAAGCCTCCCCAAGAGGCG
GCCACCAACAACCCCCCTCATAAGCCGTCCATCGGTAGAGCTGCCCAAGATGCCAAGAGCATACAGCTAGCGGCC
ATGGATAATCTCAGGCAATGGAGAGACGAATTCCTCCCCCGACTGCGCGACATCGCCGAGGTCAAGGACAGCTCC
GCCATCGAAGCCGAGCGGCAGGCCAGGCGAGAGAAGCTGAAGAAAGAGGACGCAGAAACGACCGAGAGCAGCTCA
CCAGAAGACGTGACGCAGCTGCAGTCCCTCTACCGTCCCATGCCCACACCCCTGACCGAGCTCCCCCCGCAAGAC
AGACGCGAAGCTCTCACCTGCACCCTCCTGCTCCTCCTCGCAACGGGGAAATACTCGGCCCACTCGCGCGCCCTG
ATGCTATACCTTGCGTCCGCCCTGGCACTACCCCCCACCTTCGTCAACGAGCAAGAAGGCGAGATAGCCAAGTCG
CTTATGGAGTCTTCGAATGCAGACGGTAAGGAAAACATGTCCGCCGAGGCCGAAGCCGCCAAGCGTCAAGAGGAG
AACAAGCTCAGTCGGTACTGGAAAGTCGGCCTCGCGTCCGTGGCGGGAGCGGCCGTCATCGGCGTCACGGGCGGT
CTGGCGGCGCCGCTCGTGGCCGGCGCCATCAGCGGCATCATGGGCGGTGTCGGCCTGGGCGGAGTCGCTAGCTTT
CTCGGTATCTTCTGGGCGAATGGTGCGCTGGTCGGGGCCCTGTTTGGCGCGTACGGCGCAAAGATGACGGGCGAG
ATGATGGACAACTACGCAAAAGAAGTCGAAGACTTCCGCTTCATCCCCCTGGACCAAGACCAGCAGCAGACAGAC
CAGCCGTCAGAGAAGACAGACAAAGGCCAACAGCAAGCCAAGGCAGAGCAGCGCCGGCTCCGCGTCACCATCGGC
ATCAACGGCTGGCTCAGCTCGGAAAGCGACATCCAGAAACCCTGGCTCGTGCTCGGCGCCGACTCGGAAGCGTTC
GCTCTACGGTACGAGCTCAAGACTCTTCTCGGCCTCGGCTCGGCCCTCAACGACCTCGTCCACTCGCTCGCTTGG
AAGACGGTCAAGCGGGAACTCGTCAAGCGCACCGCCCTCGCCACCCTCCTCGCAGCATTGTGGCCCGTCCAGATC
CTGGCGGCGGCATCGACCTCCATCGACAACCCCTTTCAGCGCGCCCGTCACCGATCCCGCAAGGCGGGCCGTCTC
CTGGCCGACGCCCTCGTCAATAGAGTGCAGGGAGAGCGTCCGGTAGCCCTGGTGGGCTACTCGCTAGGCGCTTCC
GCCATACATGCATGTCTGCAGGAACTCGCCGACCGGCGCGCCTTCGGCCTCGTCGACTCCGTCGTCCTCATCGGG
GCGCCCGCCCCCGCCGCCTCGGACCATTGGCGCGCCTTGCGTCCCGTCGTGTCCGGTACCATCTTCAACGTCTAC
TCGGAGAATGACCTCGTCCTCGGCCTCGTCTATCGTTTGCATGCCCTCGATTATGGCGTCGCCGGCCTGCAGCCC
GTTCATGGTGTGCCCGCTCTTCGGAACGTAGACTTCTCCGCTCATGTTACAGGCCATTTGCGCTACCCGCTGCTG
ACGGCTGATATCCTTCGTCGCTGCGGCTTCCTCCCCCCCCAAGTTGTTAATACGCAGCAAGCAGGAGGCGAATCT
CCATAG
Gene >Ophio5|2254
ATGGCGCCCCTCTGCGCGGACCCGCGTCAAGTCGTCATCGCACTCGACGTTACTCAGCGCCTCTCGCTCCTCCAA
CTCGTCCAGGATATCACCTCGTACATGATATCCCAGCTCGAAGCGCCAACCGATCAGCTTGGCCCCGTCTCCCCA
GGAGAGGAAAATGATGGGGTCGGCGGCGGAACAGGGCCATCGCTTGACGCGCAGCAGCAAAAGCTGACGTCCATC
GAGAAGCCTACGCAAGAGGCGTCCACCGGCAAGGTCGCGCAAGAGACGTCATCCGACAAGCCTCCCCAAGAGGCG
GCCACCAACAACCCCCCTCATAAGCCGTCCATCGGTAGAGCTGCCCAAGATGCCAAGAGCATACAGCTAGCGGCC
ATGGATAATCTCAGGCAATGGAGAGACGAATTCCTCCCCCGACTGCGCGACATCGCCGAGGTCAAGGACAGCTCC
GCCATCGAAGCCGAGCGGCAGGCCAGGCGAGAGAAGCTGAAGAAAGAGGACGCAGAAACGACCGAGAGCAGCTCA
CCAGAAGACGTGACGCAGCTGCAGTCCCTCTACCGTCCCATGCCCACACCCCTGACCGAGCTCCCCCCGCAAGAC
AGACGCGAAGCTCTCACCTGCACCCTCCTGCTCCTCCTCGCAACGGGGAAATACTCGGCCCACTCGCGCGCCCTG
ATGCTATACCTTGCGTCCGCCCTGGCACTACCCCCCACCTTCGTCAACGAGCAAGAAGGCGAGATAGCCAAGTCG
CTTATGGAGTCTTCGAATGCAGACGGTAAGGAAAACATGTCCGCCGAGGCCGAAGCCGCCAAGCGTCAAGAGGAG
AACAAGCTCAGTCGGTACTGGAAAGTCGGCCTCGCGTCCGTGGCGGGAGCGGCCGTCATCGGCGTCACGGGCGGT
CTGGCGGCGCCGCTCGTGGCCGGCGCCATCAGCGGCATCATGGGCGGTGTCGGCCTGGGCGGAGTCGCTAGCTTT
CTCGGTATCTTCTGGGCGAATGGTGCGCTGGTCGGGGCCCTGTTTGGCGCGTACGGCGCAAAGATGACGGTGAGA
ATCGGTTTCTTTCTTTTTTTTTTTCCTTCCCGGTAAGGGGGGGGGGTTCCGTGGACATGCCCAAGCTGAGAAGAA
TGTCCTCATGTCCCAGGGCGAGATGATGGACAACTACGCAAAAGAAGTCGAAGACTTCCGCTTCATCCCCCTGGA
CCAAGACCAGCAGCAGACAGACCAGCCGTCAGAGAAGACAGACAAAGGCCAACAGCAAGCCAAGGCAGAGCAGCG
CCGGCTCCGCGTCACCATCGGCATCAACGGCTGGCTCAGCTCGGAAAGCGACATCCAGAAACCCTGGCTCGTGCT
CGGCGCCGACTCGGAAGCGTTCGCTCTACGGTACGAGCTCAAGACTCTTCTCGGCCTCGGCTCGGCCCTCAACGA
CCTCGTCCACTCGCTCGCTTGGAAGACGGTCAAGCGGGAACTCGTCAAGCGCACCGCCCTCGCCACCCTCCTCGC
AGCATTGTGGCCCGTCCAGATCCTGGCGGCGGCATCGACCTCCATCGACAACCCCTTTCAGCGCGCCCGTCACCG
ATCCCGCAAGGCGGGCCGTCTCCTGGCCGACGCCCTCGTCAATAGAGTGCAGGGAGAGCGTCCGGTAGCCCTGGT
GGGCTACTCGCTAGGCGCTTCCGCCATACATGCATGTCTGCAGGAACTCGCCGACCGGCGCGCCTTCGGCCTCGT
CGACTCCGTCGTCCTCATCGGGGCGCCCGCCCCCGCCGCCTCGGACCATTGGCGCGCCTTGCGTCCCGTCGTGTC
CGGTACCATCTTCAACGTCTACTCGGAGAATGACCTCGTCCTCGGCCTCGTCTATCGTTTGCATGCCCTCGATTA
TGGCGTCGCCGGCCTGCAGCCCGTTCATGGTGTGCCCGCTCTTCGGAACGTAGACTTCTCCGCTCATGTTACAGG
CCATTTGCGCTACCCGCTGCTGACGGCTGATATCCTTCGTCGCTGCGGCTTCCTCGTACGTCCCGCTGACGCGCA
GGAGCAGCCTGATTCCGACACTGCGGCTGATGGCGAGCAGCCCCCCCAAGTTGTTAATACGCAGCAAGCAGGAGG
CGAATCTCCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail