© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|223 |
| Gene name | |
| Location | scaffold_104:29693..30977 |
| Strand | + |
| Gene length (bp) | 1284 |
| Transcript length (bp) | 1284 |
| Coding sequence length (bp) | 1281 |
| Protein length (aa) | 427 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 9.2E-15 | 144 | 324 |
| PF16916 | ZT_dimer | Dimerisation domain of Zinc Transporter | 1.4E-10 | 349 | 412 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 103 | 421 | 2.0E-55 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 89 | 426 | 2.0E-52 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 83 | 427 | 6.0E-52 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 91 | 421 | 6.0E-50 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 91 | 421 | 5.0E-49 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 103 | 421 | 2.0E-55 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 89 | 426 | 2.0E-52 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 83 | 427 | 6.0E-52 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 91 | 421 | 6.0E-50 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 91 | 421 | 5.0E-49 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 92 | 421 | 3.0E-47 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 146 | 427 | 1.0E-46 |
| sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 100 | 422 | 9.0E-38 |
| sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 146 | 422 | 3.0E-33 |
| sp|Q57891|Y449_METJA | Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0449 PE=3 SV=1 | 302 | 412 | 2.0E-08 |
| sp|B5XZ41|FIEF_KLEP3 | Cation-efflux pump FieF OS=Klebsiella pneumoniae (strain 342) GN=fieF PE=3 SV=1 | 153 | 402 | 5.0E-08 |
| sp|Q8RR17|FIEF_KLEPN | Cation-efflux pump FieF OS=Klebsiella pneumoniae GN=fieF PE=3 SV=1 | 153 | 402 | 5.0E-07 |
| sp|A6TGB7|FIEF_KLEP7 | Cation-efflux pump FieF OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fieF PE=3 SV=1 | 153 | 402 | 5.0E-07 |
| sp|A8AL14|FIEF_CITK8 | Cation-efflux pump FieF OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fieF PE=3 SV=1 | 137 | 402 | 7.0E-07 |
| sp|A8GLB1|FIEF_SERP5 | Cation-efflux pump FieF OS=Serratia proteamaculans (strain 568) GN=fieF PE=3 SV=1 | 153 | 412 | 1.0E-06 |
| sp|Q8L725|MTPC1_ARATH | Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1 | 144 | 412 | 3.0E-06 |
| sp|A7MQ82|FIEF_CROS8 | Cation-efflux pump FieF OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=fieF PE=3 SV=1 | 153 | 402 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0009987 | cellular process | No |
| GO:0006811 | ion transport | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.1291 | 0.1466 | 0.114 | 0.1117 | 0.1116 | 0.112 | 0.7515 | 0.4982 | 0.3779 | 0.4316 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 138 | 160 | 22 |
| 2 | 164 | 186 | 22 |
| 3 | 207 | 229 | 22 |
| 4 | 244 | 266 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 260 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|223 MSSFGRGRSPTRREAMTAPLERIASQMTDVESQKTGCETRTDGPSVESDPYDLRSGFKSASDLARVDNKSIRQNI ARVLQRARPATKEMARGPRRSPRKVRGFYEKQNEAIERMLKPVEEHRADARREQGNDQVRYRVAVYGTLAANVVL AGLQLYAAISSGSLSLFATMADAIFDPLSALALILSSRAIKHVDPRRFPAGKARLETVGNIVFCFLMTSVSLIII ALATQELVQTSSDKKFHLASIISVCAAFSTKFALFLYCWTIKDRYSQVKILWQDHRNDLFVNGFGMLTAVGGARL EWWIDPAGAIVLSLLVSAVWLHTSCGEFLLLVGVAPSVETQLLLTYVCLTHSPSVRGIETMRAYYSGPRLIVEAD VVMDQTCTLVETHDLAEELQCKLESLPEVERAYVHVDYETTHKPEHAYMKEI |
| Coding | >Ophio5|223 ATGTCCTCGTTTGGCCGCGGCAGGTCGCCGACCCGTCGCGAGGCCATGACGGCGCCCTTGGAGCGCATCGCCTCG CAGATGACAGATGTCGAGAGTCAGAAGACGGGCTGCGAGACGCGCACTGACGGACCGAGCGTCGAGAGTGATCCC TACGACCTCAGGTCCGGCTTCAAGTCCGCATCCGACTTGGCTCGCGTCGACAACAAGTCTATTCGTCAGAATATC GCCAGGGTTCTCCAGCGCGCTCGTCCGGCTACCAAGGAGATGGCGAGAGGGCCGCGACGCAGCCCCCGCAAGGTG CGAGGCTTCTATGAGAAACAGAACGAGGCCATCGAGCGGATGCTCAAGCCCGTCGAAGAGCACCGAGCCGACGCC CGCCGAGAACAGGGCAACGATCAGGTCAGGTACCGCGTTGCCGTTTACGGCACGCTGGCGGCCAACGTCGTGCTG GCGGGTCTGCAGCTCTATGCGGCCATTTCGTCCGGCTCGTTATCGCTGTTCGCCACCATGGCGGACGCCATTTTC GATCCCCTCAGCGCCCTGGCGCTCATCCTGTCGAGCCGCGCCATCAAGCACGTCGACCCGCGACGGTTTCCAGCC GGAAAGGCGCGTCTCGAGACGGTCGGCAATATCGTCTTCTGCTTTCTCATGACGTCAGTCTCGCTCATCATCATC GCGCTCGCGACGCAGGAGCTCGTGCAAACGAGTTCGGACAAGAAGTTTCACTTGGCGTCCATCATCTCGGTGTGC GCCGCCTTTTCGACCAAATTTGCGCTCTTTCTGTACTGCTGGACCATCAAGGACAGGTACAGCCAGGTCAAGATT CTGTGGCAGGACCACCGCAACGACTTGTTCGTCAACGGCTTCGGTATGCTGACGGCGGTGGGCGGCGCGCGGCTG GAGTGGTGGATCGACCCGGCGGGCGCCATCGTGCTGTCCCTGCTGGTGTCAGCCGTCTGGCTTCACACATCGTGT GGCGAGTTTCTGCTGCTGGTGGGCGTGGCGCCGTCGGTCGAGACGCAGCTGCTGCTCACGTACGTGTGTCTGACG CACTCGCCGTCCGTTCGGGGCATTGAAACGATGCGCGCCTATTACTCGGGTCCGCGGCTTATTGTTGAGGCGGAC GTCGTCATGGACCAGACGTGCACCCTCGTGGAGACGCACGACTTGGCCGAGGAGCTGCAGTGTAAGCTGGAGAGT CTGCCGGAGGTGGAGCGGGCGTACGTGCATGTCGACTATGAGACGACGCACAAGCCCGAGCACGCGTATATGAAG GAGATC |
| Transcript | >Ophio5|223 ATGTCCTCGTTTGGCCGCGGCAGGTCGCCGACCCGTCGCGAGGCCATGACGGCGCCCTTGGAGCGCATCGCCTCG CAGATGACAGATGTCGAGAGTCAGAAGACGGGCTGCGAGACGCGCACTGACGGACCGAGCGTCGAGAGTGATCCC TACGACCTCAGGTCCGGCTTCAAGTCCGCATCCGACTTGGCTCGCGTCGACAACAAGTCTATTCGTCAGAATATC GCCAGGGTTCTCCAGCGCGCTCGTCCGGCTACCAAGGAGATGGCGAGAGGGCCGCGACGCAGCCCCCGCAAGGTG CGAGGCTTCTATGAGAAACAGAACGAGGCCATCGAGCGGATGCTCAAGCCCGTCGAAGAGCACCGAGCCGACGCC CGCCGAGAACAGGGCAACGATCAGGTCAGGTACCGCGTTGCCGTTTACGGCACGCTGGCGGCCAACGTCGTGCTG GCGGGTCTGCAGCTCTATGCGGCCATTTCGTCCGGCTCGTTATCGCTGTTCGCCACCATGGCGGACGCCATTTTC GATCCCCTCAGCGCCCTGGCGCTCATCCTGTCGAGCCGCGCCATCAAGCACGTCGACCCGCGACGGTTTCCAGCC GGAAAGGCGCGTCTCGAGACGGTCGGCAATATCGTCTTCTGCTTTCTCATGACGTCAGTCTCGCTCATCATCATC GCGCTCGCGACGCAGGAGCTCGTGCAAACGAGTTCGGACAAGAAGTTTCACTTGGCGTCCATCATCTCGGTGTGC GCCGCCTTTTCGACCAAATTTGCGCTCTTTCTGTACTGCTGGACCATCAAGGACAGGTACAGCCAGGTCAAGATT CTGTGGCAGGACCACCGCAACGACTTGTTCGTCAACGGCTTCGGTATGCTGACGGCGGTGGGCGGCGCGCGGCTG GAGTGGTGGATCGACCCGGCGGGCGCCATCGTGCTGTCCCTGCTGGTGTCAGCCGTCTGGCTTCACACATCGTGT GGCGAGTTTCTGCTGCTGGTGGGCGTGGCGCCGTCGGTCGAGACGCAGCTGCTGCTCACGTACGTGTGTCTGACG CACTCGCCGTCCGTTCGGGGCATTGAAACGATGCGCGCCTATTACTCGGGTCCGCGGCTTATTGTTGAGGCGGAC GTCGTCATGGACCAGACGTGCACCCTCGTGGAGACGCACGACTTGGCCGAGGAGCTGCAGTGTAAGCTGGAGAGT CTGCCGGAGGTGGAGCGGGCGTACGTGCATGTCGACTATGAGACGACGCACAAGCCCGAGCACGCGTATATGAAG GAGATCTGA |
| Gene | >Ophio5|223 ATGTCCTCGTTTGGCCGCGGCAGGTCGCCGACCCGTCGCGAGGCCATGACGGCGCCCTTGGAGCGCATCGCCTCG CAGATGACAGATGTCGAGAGTCAGAAGACGGGCTGCGAGACGCGCACTGACGGACCGAGCGTCGAGAGTGATCCC TACGACCTCAGGTCCGGCTTCAAGTCCGCATCCGACTTGGCTCGCGTCGACAACAAGTCTATTCGTCAGAATATC GCCAGGGTTCTCCAGCGCGCTCGTCCGGCTACCAAGGAGATGGCGAGAGGGCCGCGACGCAGCCCCCGCAAGGTG CGAGGCTTCTATGAGAAACAGAACGAGGCCATCGAGCGGATGCTCAAGCCCGTCGAAGAGCACCGAGCCGACGCC CGCCGAGAACAGGGCAACGATCAGGTCAGGTACCGCGTTGCCGTTTACGGCACGCTGGCGGCCAACGTCGTGCTG GCGGGTCTGCAGCTCTATGCGGCCATTTCGTCCGGCTCGTTATCGCTGTTCGCCACCATGGCGGACGCCATTTTC GATCCCCTCAGCGCCCTGGCGCTCATCCTGTCGAGCCGCGCCATCAAGCACGTCGACCCGCGACGGTTTCCAGCC GGAAAGGCGCGTCTCGAGACGGTCGGCAATATCGTCTTCTGCTTTCTCATGACGTCAGTCTCGCTCATCATCATC GCGCTCGCGACGCAGGAGCTCGTGCAAACGAGTTCGGACAAGAAGTTTCACTTGGCGTCCATCATCTCGGTGTGC GCCGCCTTTTCGACCAAATTTGCGCTCTTTCTGTACTGCTGGACCATCAAGGACAGGTACAGCCAGGTCAAGATT CTGTGGCAGGACCACCGCAACGACTTGTTCGTCAACGGCTTCGGTATGCTGACGGCGGTGGGCGGCGCGCGGCTG GAGTGGTGGATCGACCCGGCGGGCGCCATCGTGCTGTCCCTGCTGGTGTCAGCCGTCTGGCTTCACACATCGTGT GGCGAGTTTCTGCTGCTGGTGGGCGTGGCGCCGTCGGTCGAGACGCAGCTGCTGCTCACGTACGTGTGTCTGACG CACTCGCCGTCCGTTCGGGGCATTGAAACGATGCGCGCCTATTACTCGGGTCCGCGGCTTATTGTTGAGGCGGAC GTCGTCATGGACCAGACGTGCACCCTCGTGGAGACGCACGACTTGGCCGAGGAGCTGCAGTGTAAGCTGGAGAGT CTGCCGGAGGTGGAGCGGGCGTACGTGCATGTCGACTATGAGACGACGCACAAGCCCGAGCACGCGTATATGAAG GAGATCTGA |