© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|2204 |
| Gene name | |
| Location | scaffold_190:14188..16002 |
| Strand | + |
| Gene length (bp) | 1814 |
| Transcript length (bp) | 1668 |
| Coding sequence length (bp) | 1665 |
| Protein length (aa) | 555 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08601 | PAP1 | Transcription factor PAP1 | 1.0E-08 | 274 | 368 |
| PF08601 | PAP1 | Transcription factor PAP1 | 1.2E-58 | 381 | 524 |
| PF00170 | bZIP_1 | bZIP transcription factor | 9.4E-08 | 163 | 210 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P56095|AP1_KLULA | AP-1-like transcription factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YAP1 PE=3 SV=1 | 119 | 260 | 4.0E-20 |
| sp|Q5AJU7|YAP1_CANAL | AP-1-like transcription factor CAP1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAP1 PE=1 SV=1 | 133 | 221 | 1.0E-15 |
| sp|Q01663|AP1_SCHPO | AP-1-like transcription factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pap1 PE=1 SV=2 | 148 | 222 | 1.0E-13 |
| sp|P19880|YAP1_YEAST | AP-1-like transcription factor YAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1 PE=1 SV=2 | 159 | 222 | 5.0E-10 |
| sp|P19880|YAP1_YEAST | AP-1-like transcription factor YAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1 PE=1 SV=2 | 471 | 527 | 6.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P56095|AP1_KLULA | AP-1-like transcription factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YAP1 PE=3 SV=1 | 119 | 260 | 4.0E-20 |
| sp|Q5AJU7|YAP1_CANAL | AP-1-like transcription factor CAP1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAP1 PE=1 SV=1 | 133 | 221 | 1.0E-15 |
| sp|Q01663|AP1_SCHPO | AP-1-like transcription factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pap1 PE=1 SV=2 | 148 | 222 | 1.0E-13 |
| sp|P19880|YAP1_YEAST | AP-1-like transcription factor YAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1 PE=1 SV=2 | 159 | 222 | 5.0E-10 |
| sp|P19880|YAP1_YEAST | AP-1-like transcription factor YAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP1 PE=1 SV=2 | 471 | 527 | 6.0E-09 |
| sp|Q5AJU7|YAP1_CANAL | AP-1-like transcription factor CAP1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAP1 PE=1 SV=1 | 469 | 526 | 2.0E-08 |
| sp|P24813|YAP2_YEAST | AP-1-like transcription activator YAP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAD1 PE=1 SV=2 | 150 | 195 | 7.0E-08 |
| sp|Q01663|AP1_SCHPO | AP-1-like transcription factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pap1 PE=1 SV=2 | 428 | 525 | 6.0E-07 |
| sp|Q8X229|FCR3_CANAX | Fluconazole resistance protein 3 OS=Candida albicans GN=FCR3 PE=3 SV=1 | 159 | 261 | 7.0E-07 |
| sp|P56095|AP1_KLULA | AP-1-like transcription factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YAP1 PE=3 SV=1 | 441 | 526 | 9.0E-07 |
| sp|P40574|YAP5_YEAST | AP-1-like transcription factor YAP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAP5 PE=1 SV=1 | 159 | 255 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0003700 | DNA-binding transcription factor activity | Yes |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0065007 | biological regulation | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0003674 | molecular_function | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| bZIP |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 85.78 | 46.36 | 125.19 |
| CcL | In ants, during behavior modification | 69.91 | 37.14 | 102.68 |
| CcD | In ants, recently dead | 46.11 | 25.14 | 67.07 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.407576 | no |
| SC16a | CcD | 0.003199 | yes |
| CcL | CcD | 0.069043 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2204 MPPAEADDGAGSVPPNFFLTPHQQNLLFAALNTNRQTSAATGAFPAPGAVSLSPTSFQSSPLPSLDGGARYQESP YLDKYDYDFGDSSFDFSLATVDQSQTANDGPATVKSDSTEADSNEKRHHPDDEEPGDSPGNDSKRHEASEKAPKK PGRKPLTSEPTSKRKAQNRAAQRAFRERKEKHLKDLETKVHELEKASEAANHENSKLRTQLNGITTELNHYKQRL AVLTNTTKAVPRDGMPLSNPLLGNLADLNFPFEFPKFGSPLVADKSATQNGQAAQRQSFGDKTSPTSVRPSAHDE YGRLSSMTSSRASVDGFGGATSSPSASSNSNAGGPVSSCGTSPEPPNHSPMGSKPLETLTTIGEEQPGAVGTLAG HFPPADNHAASFDWLASQNGGQFDPQLFGDYREPQDNILSGTNIDDFFNDALDADFLTPYNVPPLAAPPGPKRNL IDEIDAEQNALDEDLPKEQNVRCTKIWDRLQGCPKAQSGEFDLDGLCSELTQKAKCSGHGPVVAERDFDSILRKY MGKDVSPHCVASSLGFEVHPDEKPNGVVMP |
| Coding | >Ophio5|2204 ATGCCTCCCGCCGAGGCCGACGACGGAGCTGGCTCCGTGCCGCCCAACTTCTTCTTGACGCCGCACCAGCAGAAT CTTCTCTTTGCCGCCCTGAATACCAATAGGCAAACGTCCGCTGCAACTGGCGCCTTTCCTGCTCCGGGAGCCGTC TCTCTGTCGCCTACGTCGTTTCAGAGCTCGCCTCTGCCGTCCCTTGACGGCGGTGCCCGCTATCAGGAGAGCCCT TACCTCGACAAGTACGACTATGATTTCGGCGACTCTAGTTTCGATTTTTCCTTGGCCACCGTCGATCAGTCCCAA ACGGCAAACGATGGCCCAGCCACCGTCAAGTCCGATTCGACCGAGGCCGACTCCAACGAGAAGCGGCACCACCCG GACGACGAGGAGCCCGGCGACAGCCCTGGCAACGACTCCAAGCGCCATGAGGCCTCCGAAAAAGCCCCTAAAAAG CCTGGCCGGAAGCCCCTGACTTCCGAGCCCACTTCGAAGCGCAAGGCCCAGAACCGTGCTGCACAGCGTGCGTTT AGGGAGCGCAAGGAAAAGCATCTCAAGGACCTCGAGACTAAGGTTCACGAGTTGGAGAAGGCCTCCGAGGCGGCC AATCACGAGAATAGCAAGCTGCGGACGCAGCTCAACGGCATCACCACCGAGCTCAACCACTATAAGCAGAGGCTG GCCGTTCTGACCAACACCACCAAGGCCGTCCCTCGCGATGGCATGCCCCTGAGCAACCCCCTCCTCGGCAACCTG GCCGACCTGAACTTCCCCTTCGAGTTTCCCAAGTTCGGCTCCCCCCTCGTGGCCGACAAGTCCGCTACACAAAAT GGTCAAGCCGCCCAGCGCCAGAGCTTTGGCGACAAGACGTCGCCCACGTCTGTTCGGCCCTCAGCCCACGACGAA TATGGCAGGCTGTCTTCCATGACAAGCTCGCGAGCCAGCGTCGATGGCTTCGGGGGAGCGACGAGCTCGCCGTCG GCGTCGTCCAACTCCAACGCGGGAGGGCCCGTCTCGTCGTGCGGCACCTCGCCGGAGCCGCCCAATCACTCCCCC ATGGGCTCTAAGCCGCTCGAGACGCTGACCACCATCGGCGAGGAGCAACCGGGCGCCGTTGGCACCCTGGCCGGC CATTTCCCCCCTGCCGACAACCATGCCGCCAGCTTCGACTGGCTGGCCAGCCAGAACGGTGGCCAGTTCGATCCG CAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAATATCCTGTCCGGCACCAACATCGACGACTTCTTCAACGAC GCCCTCGACGCAGACTTCCTTACGCCCTACAACGTCCCCCCCCTGGCCGCGCCGCCGGGACCCAAGCGGAATCTC ATCGACGAGATTGACGCCGAGCAGAACGCGCTGGACGAGGATCTGCCCAAGGAGCAAAACGTCCGGTGCACAAAG ATTTGGGACAGGCTGCAGGGCTGCCCCAAGGCCCAGAGCGGCGAGTTTGACCTCGACGGCCTCTGCTCGGAGCTC ACGCAAAAGGCAAAGTGCTCAGGCCACGGTCCCGTCGTCGCCGAGCGCGACTTCGACTCCATCCTGAGAAAGTAC ATGGGCAAGGACGTGTCGCCCCATTGCGTCGCCTCCTCCCTCGGCTTCGAAGTCCATCCGGACGAGAAGCCCAAC GGCGTGGTTATGCCT |
| Transcript | >Ophio5|2204 ATGCCTCCCGCCGAGGCCGACGACGGAGCTGGCTCCGTGCCGCCCAACTTCTTCTTGACGCCGCACCAGCAGAAT CTTCTCTTTGCCGCCCTGAATACCAATAGGCAAACGTCCGCTGCAACTGGCGCCTTTCCTGCTCCGGGAGCCGTC TCTCTGTCGCCTACGTCGTTTCAGAGCTCGCCTCTGCCGTCCCTTGACGGCGGTGCCCGCTATCAGGAGAGCCCT TACCTCGACAAGTACGACTATGATTTCGGCGACTCTAGTTTCGATTTTTCCTTGGCCACCGTCGATCAGTCCCAA ACGGCAAACGATGGCCCAGCCACCGTCAAGTCCGATTCGACCGAGGCCGACTCCAACGAGAAGCGGCACCACCCG GACGACGAGGAGCCCGGCGACAGCCCTGGCAACGACTCCAAGCGCCATGAGGCCTCCGAAAAAGCCCCTAAAAAG CCTGGCCGGAAGCCCCTGACTTCCGAGCCCACTTCGAAGCGCAAGGCCCAGAACCGTGCTGCACAGCGTGCGTTT AGGGAGCGCAAGGAAAAGCATCTCAAGGACCTCGAGACTAAGGTTCACGAGTTGGAGAAGGCCTCCGAGGCGGCC AATCACGAGAATAGCAAGCTGCGGACGCAGCTCAACGGCATCACCACCGAGCTCAACCACTATAAGCAGAGGCTG GCCGTTCTGACCAACACCACCAAGGCCGTCCCTCGCGATGGCATGCCCCTGAGCAACCCCCTCCTCGGCAACCTG GCCGACCTGAACTTCCCCTTCGAGTTTCCCAAGTTCGGCTCCCCCCTCGTGGCCGACAAGTCCGCTACACAAAAT GGTCAAGCCGCCCAGCGCCAGAGCTTTGGCGACAAGACGTCGCCCACGTCTGTTCGGCCCTCAGCCCACGACGAA TATGGCAGGCTGTCTTCCATGACAAGCTCGCGAGCCAGCGTCGATGGCTTCGGGGGAGCGACGAGCTCGCCGTCG GCGTCGTCCAACTCCAACGCGGGAGGGCCCGTCTCGTCGTGCGGCACCTCGCCGGAGCCGCCCAATCACTCCCCC ATGGGCTCTAAGCCGCTCGAGACGCTGACCACCATCGGCGAGGAGCAACCGGGCGCCGTTGGCACCCTGGCCGGC CATTTCCCCCCTGCCGACAACCATGCCGCCAGCTTCGACTGGCTGGCCAGCCAGAACGGTGGCCAGTTCGATCCG CAGCTGTTCGGCGACTACCGCGAGCCCCAGGACAATATCCTGTCCGGCACCAACATCGACGACTTCTTCAACGAC GCCCTCGACGCAGACTTCCTTACGCCCTACAACGTCCCCCCCCTGGCCGCGCCGCCGGGACCCAAGCGGAATCTC ATCGACGAGATTGACGCCGAGCAGAACGCGCTGGACGAGGATCTGCCCAAGGAGCAAAACGTCCGGTGCACAAAG ATTTGGGACAGGCTGCAGGGCTGCCCCAAGGCCCAGAGCGGCGAGTTTGACCTCGACGGCCTCTGCTCGGAGCTC ACGCAAAAGGCAAAGTGCTCAGGCCACGGTCCCGTCGTCGCCGAGCGCGACTTCGACTCCATCCTGAGAAAGTAC ATGGGCAAGGACGTGTCGCCCCATTGCGTCGCCTCCTCCCTCGGCTTCGAAGTCCATCCGGACGAGAAGCCCAAC GGCGTGGTTATGCCTTAG |
| Gene | >Ophio5|2204 ATGCCTCCCGCCGAGGCCGACGACGGAGCTGGCTCCGTGCCGCCCAACTTCTTCTTGACGCCGCACCAGCAGAAT CTTCTCTTTGCCGCCCTGAATACCAATAGGCAAACGTCCGCTGCAACTGGCGCCTTTCCTGCTCCGGGAGCCGTC TCTCTGTCGCCTACGTCGTTTCAGAGCTCGCCTCTGCCGTCCCTTGACGGCGGTGCCCGCTATCAGGAGAGCCCT TACCTCGACAAGTACGACTATGATTTCGGCGACTCTAGTTTCGATTTTTCCTTGGCCACCGTCGATCAGTCCCAA ACGGCAAACGATGGCCCAGCCACCGTCAAGTCCGATTCGACCGAGGCCGACTCCAACGAGAAGCGGCACCACCCG GACGACGAGGAGCCCGGCGACAGCCCTGGCAACGACTCCAAGCGCCATGAGGCCTCCGAAAAAGCCCCTAAAAAG CCTGGCCGGAAGCCCCTGACTTCCGAGCCCACTTCGGTAAGCGTTCCATGCCGACTCTCCGTCCGGCCCACCGAC CCGCTGAATAGCCACCGCAGAAGCGCAAGGCCCAGAACCGTGCTGCACAGCGTGCGTTTAGGGAGCGCAAGGAAA AGCATCTCAAGGACCTCGAGACTAAGGTTCACGAGTTGGAGAAGGCCTCCGAGGCGGCCAATCACGAGAATAGCA AGCTGCGGACGCAGCTCAACGGCATCACCACCGAGCTCAACCACTATAAGCAGAGGCTGGCCGTTCTGACCAACA CCACCAAGGCCGTCCCTCGCGATGGCATGCCCCTGAGCAACCCCCTCCTCGGCAACCTGGCCGACCTGAACTTCC CCTTCGAGTTTCCCAAGTTCGGCTCCCCCCTCGTGGCCGACAAGTCCGCTACACAAAATGGTCAAGCCGCCCAGC GCCAGAGCTTTGGCGACAAGACGTCGCCCACGTCTGTTCGGCCCTCAGCCCACGACGAATATGGCAGGCTGTCTT CCATGACAAGCTCGCGAGCCAGCGTCGATGGCTTCGGGGGAGCGACGAGCTCGCCGTCGGCGTCGTCCAACTCCA ACGCGGGAGGGCCCGTCTCGTCGTGCGGCACCTCGCCGGAGCCGCCCAATCACTCCCCCATGGGCTCTAAGCCGC TCGAGACGCTGACCACCATCGGCGAGGAGCAACCGGGCGCCGTTGGCACCCTGGCCGGCCATTTCCCCCCTGCCG ACAACCATGCCGCCAGCTTCGACTGGCTGGCCAGCCAGAACGGTGGCCAGTTCGATCCGCAGCTGTTCGGCGACT ACCGCGAGCCCCAGGACAATATCCTGTCCGGCACCAACATCGACGACTTCTTCAACGACGCCCTCGACGCAGACT TCCTTACGCCCTACAACGTCCCCCCCCTGGCCGCGCCGCCGGGACCCAAGCGGAATCTCATCGACGAGATTGACG CCGAGCAGAACGCGCTGGACGAGGATCTGCCCAAGGAGCAAAACGTCCGGTGCACAAAGATTTGGTATCTACAGC TCAAGCTTCCGCCCCTCATCTCCCTGACTGTCCGTCCGTCGCTGACCCATTGTTCTCCTTCTTTTCCACCTTACA GGGACAGGCTGCAGGGCTGCCCCAAGGCCCAGAGCGGCGAGTTTGACCTCGACGGCCTCTGCTCGGAGCTCACGC AAAAGGCAAAGTGCTCAGGCCACGGTCCCGTCGTCGCCGAGCGCGACTTCGACTCCATCCTGAGAAAGTACATGG GCAAGGACGTGTCGCCCCATTGCGTCGCCTCCTCCCTCGGCTTCGAAGTCCATCCGGACGAGAAGCCCAACGGCG TGGTTATGCCTTAG |