Protein ID | Ophio5|2182 |
Gene name | |
Location | scaffold_19:50816..52386 |
Strand | + |
Gene length (bp) | 1570 |
Transcript length (bp) | 1398 |
Coding sequence length (bp) | 1395 |
Protein length (aa) | 465 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 2.80 | 0.55 | 5.05 |
CcL | In ants, during behavior modification | 8.97 | 2.72 | 15.23 |
CcD | In ants, recently dead | 4.38 | 1.18 | 7.58 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000997 | yes |
SC16a | CcD | 0.262056 | no |
CcL | CcD | 0.040544 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|2182 MASLRHAIIAALALASPSTCKCCNAHSPSDPAGACPGELSTDYAGPVAAPGWSYRLVAKRLQKPRSLAFDSVGRL LVLDAGVGVLGMMVGDDQRGTACVTLKRPQVVVESSELNHGLALSADGKTLFASSPSSVFAWQYDAAAGTVRGPR RTVIANMSSSGDQTTTRTLVASRAQPGTLIVSRGVTHDHDASALDEGTGHAQIRAFRLTDDGTRDFADGTLLGWG LRNSVGVAEDPARAGIWSVENSVDELVRVGRDAHTDNPGEELNYHGRLGSRQDQGGNYGFPRCFAVWNASALPDR GSLRTGDQFAGTESASDEQCRNDFVAPRLAFAAHSSPLDIKFDSSGSRAFLSFHGSWNRENPIGYRIAVVTFNNA TGEPTSPRDSSDAAADVLTVPNLADCPDRCFRPVGLALDGSGRLWFSSDSSGEVFVLHRDEDAAGSHAAPKLMSR RTALLWAVATAALLA |
Coding | >Ophio5|2182 ATGGCCAGCCTGCGCCACGCCATCATAGCCGCTCTGGCGCTGGCGTCGCCGTCGACGTGCAAATGCTGCAACGCG CATTCGCCTTCGGACCCAGCCGGGGCCTGTCCCGGAGAGCTGTCGACCGACTATGCCGGTCCCGTGGCCGCCCCG GGATGGAGCTACAGGCTCGTGGCCAAGCGGCTCCAGAAGCCGCGCAGTCTGGCCTTCGACTCGGTCGGTAGGCTG TTGGTCCTGGACGCGGGCGTCGGCGTGCTGGGGATGATGGTGGGGGATGATCAGAGGGGTACCGCCTGCGTGACG CTCAAGAGGCCGCAGGTCGTCGTCGAGAGCTCCGAGCTCAATCACGGCCTCGCCCTCTCGGCCGACGGCAAGACG CTCTTCGCCTCGTCGCCGTCGTCCGTCTTCGCTTGGCAGTACGACGCTGCGGCCGGTACGGTAAGAGGTCCTCGG CGGACCGTCATCGCCAACATGTCGTCATCGGGGGACCAGACCACGACGCGGACCCTCGTCGCGTCTCGCGCTCAG CCGGGTACGCTCATCGTCTCACGAGGCGTCACTCACGACCATGACGCGTCCGCTCTCGATGAGGGAACCGGCCAT GCTCAGATCCGAGCTTTTCGTCTGACCGATGATGGCACTCGTGACTTTGCCGACGGCACTCTCCTCGGCTGGGGC CTACGCAACTCGGTCGGTGTCGCCGAAGACCCGGCCCGGGCCGGCATCTGGTCCGTCGAGAACTCCGTCGATGAG CTGGTGCGTGTCGGCCGCGACGCCCATACCGACAACCCGGGAGAGGAGCTCAACTATCACGGACGCCTGGGCAGT CGACAGGACCAGGGCGGCAACTATGGCTTCCCCCGGTGCTTCGCCGTCTGGAATGCGAGCGCCCTTCCGGATCGA GGTTCGCTCCGGACGGGCGACCAGTTCGCCGGCACCGAGTCGGCATCGGACGAGCAGTGCCGTAACGACTTTGTC GCCCCTCGTCTGGCATTCGCCGCGCACTCGTCGCCCCTGGATATCAAGTTCGATAGCTCGGGGTCGAGAGCTTTC CTGTCTTTCCACGGCAGCTGGAACCGCGAGAACCCCATCGGCTACCGCATCGCCGTCGTCACCTTCAACAACGCC ACGGGCGAGCCCACGTCCCCCCGTGACAGCTCCGACGCCGCCGCCGACGTGCTCACCGTGCCGAACCTGGCCGAC TGTCCTGACAGATGCTTCCGTCCCGTAGGCCTCGCATTGGACGGGAGCGGCCGGCTCTGGTTCAGCTCCGACAGC TCGGGCGAAGTCTTTGTTCTGCACCGCGATGAGGATGCCGCCGGCAGCCATGCCGCTCCCAAGCTGATGTCGCGC CGCACCGCCTTGCTGTGGGCTGTCGCAACCGCCGCCCTCCTCGCC |
Transcript | >Ophio5|2182 ATGGCCAGCCTGCGCCACGCCATCATAGCCGCTCTGGCGCTGGCGTCGCCGTCGACGTGCAAATGCTGCAACGCG CATTCGCCTTCGGACCCAGCCGGGGCCTGTCCCGGAGAGCTGTCGACCGACTATGCCGGTCCCGTGGCCGCCCCG GGATGGAGCTACAGGCTCGTGGCCAAGCGGCTCCAGAAGCCGCGCAGTCTGGCCTTCGACTCGGTCGGTAGGCTG TTGGTCCTGGACGCGGGCGTCGGCGTGCTGGGGATGATGGTGGGGGATGATCAGAGGGGTACCGCCTGCGTGACG CTCAAGAGGCCGCAGGTCGTCGTCGAGAGCTCCGAGCTCAATCACGGCCTCGCCCTCTCGGCCGACGGCAAGACG CTCTTCGCCTCGTCGCCGTCGTCCGTCTTCGCTTGGCAGTACGACGCTGCGGCCGGTACGGTAAGAGGTCCTCGG CGGACCGTCATCGCCAACATGTCGTCATCGGGGGACCAGACCACGACGCGGACCCTCGTCGCGTCTCGCGCTCAG CCGGGTACGCTCATCGTCTCACGAGGCGTCACTCACGACCATGACGCGTCCGCTCTCGATGAGGGAACCGGCCAT GCTCAGATCCGAGCTTTTCGTCTGACCGATGATGGCACTCGTGACTTTGCCGACGGCACTCTCCTCGGCTGGGGC CTACGCAACTCGGTCGGTGTCGCCGAAGACCCGGCCCGGGCCGGCATCTGGTCCGTCGAGAACTCCGTCGATGAG CTGGTGCGTGTCGGCCGCGACGCCCATACCGACAACCCGGGAGAGGAGCTCAACTATCACGGACGCCTGGGCAGT CGACAGGACCAGGGCGGCAACTATGGCTTCCCCCGGTGCTTCGCCGTCTGGAATGCGAGCGCCCTTCCGGATCGA GGTTCGCTCCGGACGGGCGACCAGTTCGCCGGCACCGAGTCGGCATCGGACGAGCAGTGCCGTAACGACTTTGTC GCCCCTCGTCTGGCATTCGCCGCGCACTCGTCGCCCCTGGATATCAAGTTCGATAGCTCGGGGTCGAGAGCTTTC CTGTCTTTCCACGGCAGCTGGAACCGCGAGAACCCCATCGGCTACCGCATCGCCGTCGTCACCTTCAACAACGCC ACGGGCGAGCCCACGTCCCCCCGTGACAGCTCCGACGCCGCCGCCGACGTGCTCACCGTGCCGAACCTGGCCGAC TGTCCTGACAGATGCTTCCGTCCCGTAGGCCTCGCATTGGACGGGAGCGGCCGGCTCTGGTTCAGCTCCGACAGC TCGGGCGAAGTCTTTGTTCTGCACCGCGATGAGGATGCCGCCGGCAGCCATGCCGCTCCCAAGCTGATGTCGCGC CGCACCGCCTTGCTGTGGGCTGTCGCAACCGCCGCCCTCCTCGCCTGA |
Gene | >Ophio5|2182 ATGGCCAGCCTGCGCCACGCCATCATAGCCGCTCTGGCGCTGGCGTCGCCGTCGACGTGCAAATGCTGCAACGCG CATTCGCCTTCGGACCCAGCCGGGGCCTGTCCCGGAGAGCTGTCGACCGACTATGCCGGTCCCGTGGCCGCCCCG GGATGGAGCTACAGGCTCGTGGCCAAGCGGCTCCAGAAGCCGCGCAGTCTGGCCTTCGACTCGGTCGGTAGGCTG TTGGTCCTGGACGCGGGCGTCGGCGTGCTGGGGATGATGGTGGGGGATGATCAGAGGGGTACCGCCTGCGTGACG CTCAAGAGGCCGCAGGTCGTCGTCGAGAGCTCCGAGGTGAGTTGAGGTCGGTCGTTGTTGTTGTTGTTGTTGTCC TTTTGCCAGTCATGGAGCGGGAAGAGCTGAGCTCGAGGTGCTTGAATTCTCTCGTCAGCTCAATCACGGCCTCGC CCTCTCGGCCGACGGCAAGACGCTCTTCGCCTCGTCGCCGTCGTCCGTCTTCGCTTGGCAGTACGACGCTGCGGC CGGTACGGTAAGAGGTCCTCGGCGGACCGTCATCGCCAACATGTCGTCATCGGGGGACCAGACCACGACGCGGAC CCTCGTCGCGTCTCGCGCTCAGCCGGGTACGCTCATCGTCTCACGAGGCGTCACTCACGACCATGACGCGTCCGC TCTCGATGAGGGAACCGGCCATGCTCAGATCCGAGCTTTTCGTCTGACCGATGATGGCACTCGTGACTTTGCCGA CGGCACTCTCCTCGGCTGGGGCCTACGCAACTCGGTCGGTGTCGCCGAAGACCCGGCCCGGGCCGGCATCTGGTC CGTCGAGAACTCCGTCGATGAGCTGGTGCGTGTCGGCCGCGACGCCCATACCGACAACCCGGGAGAGGAGCTCAA CTATCACGGACGCCTGGGCAGTCGACAGGACCAGGGCGGCAACTATGGCTTCCCCCGGTGCTTCGCCGTCTGGAA TGCGAGCGCCCTTCCGGATCGAGGTTCGCTCCGGACGGGCGACCAGTTCGCCGGCACCGAGTCGGCATCGGACGA GCAGTGCCGTAACGACTTTGTCGCCCCTCGTCTGGCATTCGCCGCGCACTCGTCGCCCCTGGATATCAAGTTCGA TAGCTCGGGGTCGAGAGCTTTCCTGTCTTTCCACGGCAGCTGTGAGTCCGCGCCCTGGCTGTCGCCCGCTGAGAC AGAACATTCCACCCCCTTTATCGTTTTTTGACGCGTCAAAGGGAACCGCGAGAACCCCATCGGCTACCGCATCGC CGTCGTCACCTTCAACAACGCCACGGGCGAGCCCACGTCCCCCCGTGACAGCTCCGACGCCGCCGCCGACGTGCT CACCGTGCCGAACCTGGCCGACTGTCCTGACAGATGCTTCCGTCCCGTAGGCCTCGCATTGGACGGGAGCGGCCG GCTCTGGTTCAGCTCCGACAGCTCGGGCGAAGTCTTTGTTCTGCACCGCGATGAGGATGCCGCCGGCAGCCATGC CGCTCCCAAGCTGATGTCGCGCCGCACCGCCTTGCTGTGGGCTGTCGCAACCGCCGCCCTCCTCGCCTGA |