Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2182
Gene name
Locationscaffold_19:50816..52386
Strand+
Gene length (bp)1570
Transcript length (bp)1398
Coding sequence length (bp)1395
Protein length (aa) 465

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 2.80 0.55 5.05
CcL In ants, during behavior modification 8.97 2.72 15.23
CcD In ants, recently dead 4.38 1.18 7.58

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000997 yes
SC16a CcD 0.262056 no
CcL CcD 0.040544 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2182
MASLRHAIIAALALASPSTCKCCNAHSPSDPAGACPGELSTDYAGPVAAPGWSYRLVAKRLQKPRSLAFDSVGRL
LVLDAGVGVLGMMVGDDQRGTACVTLKRPQVVVESSELNHGLALSADGKTLFASSPSSVFAWQYDAAAGTVRGPR
RTVIANMSSSGDQTTTRTLVASRAQPGTLIVSRGVTHDHDASALDEGTGHAQIRAFRLTDDGTRDFADGTLLGWG
LRNSVGVAEDPARAGIWSVENSVDELVRVGRDAHTDNPGEELNYHGRLGSRQDQGGNYGFPRCFAVWNASALPDR
GSLRTGDQFAGTESASDEQCRNDFVAPRLAFAAHSSPLDIKFDSSGSRAFLSFHGSWNRENPIGYRIAVVTFNNA
TGEPTSPRDSSDAAADVLTVPNLADCPDRCFRPVGLALDGSGRLWFSSDSSGEVFVLHRDEDAAGSHAAPKLMSR
RTALLWAVATAALLA
Coding >Ophio5|2182
ATGGCCAGCCTGCGCCACGCCATCATAGCCGCTCTGGCGCTGGCGTCGCCGTCGACGTGCAAATGCTGCAACGCG
CATTCGCCTTCGGACCCAGCCGGGGCCTGTCCCGGAGAGCTGTCGACCGACTATGCCGGTCCCGTGGCCGCCCCG
GGATGGAGCTACAGGCTCGTGGCCAAGCGGCTCCAGAAGCCGCGCAGTCTGGCCTTCGACTCGGTCGGTAGGCTG
TTGGTCCTGGACGCGGGCGTCGGCGTGCTGGGGATGATGGTGGGGGATGATCAGAGGGGTACCGCCTGCGTGACG
CTCAAGAGGCCGCAGGTCGTCGTCGAGAGCTCCGAGCTCAATCACGGCCTCGCCCTCTCGGCCGACGGCAAGACG
CTCTTCGCCTCGTCGCCGTCGTCCGTCTTCGCTTGGCAGTACGACGCTGCGGCCGGTACGGTAAGAGGTCCTCGG
CGGACCGTCATCGCCAACATGTCGTCATCGGGGGACCAGACCACGACGCGGACCCTCGTCGCGTCTCGCGCTCAG
CCGGGTACGCTCATCGTCTCACGAGGCGTCACTCACGACCATGACGCGTCCGCTCTCGATGAGGGAACCGGCCAT
GCTCAGATCCGAGCTTTTCGTCTGACCGATGATGGCACTCGTGACTTTGCCGACGGCACTCTCCTCGGCTGGGGC
CTACGCAACTCGGTCGGTGTCGCCGAAGACCCGGCCCGGGCCGGCATCTGGTCCGTCGAGAACTCCGTCGATGAG
CTGGTGCGTGTCGGCCGCGACGCCCATACCGACAACCCGGGAGAGGAGCTCAACTATCACGGACGCCTGGGCAGT
CGACAGGACCAGGGCGGCAACTATGGCTTCCCCCGGTGCTTCGCCGTCTGGAATGCGAGCGCCCTTCCGGATCGA
GGTTCGCTCCGGACGGGCGACCAGTTCGCCGGCACCGAGTCGGCATCGGACGAGCAGTGCCGTAACGACTTTGTC
GCCCCTCGTCTGGCATTCGCCGCGCACTCGTCGCCCCTGGATATCAAGTTCGATAGCTCGGGGTCGAGAGCTTTC
CTGTCTTTCCACGGCAGCTGGAACCGCGAGAACCCCATCGGCTACCGCATCGCCGTCGTCACCTTCAACAACGCC
ACGGGCGAGCCCACGTCCCCCCGTGACAGCTCCGACGCCGCCGCCGACGTGCTCACCGTGCCGAACCTGGCCGAC
TGTCCTGACAGATGCTTCCGTCCCGTAGGCCTCGCATTGGACGGGAGCGGCCGGCTCTGGTTCAGCTCCGACAGC
TCGGGCGAAGTCTTTGTTCTGCACCGCGATGAGGATGCCGCCGGCAGCCATGCCGCTCCCAAGCTGATGTCGCGC
CGCACCGCCTTGCTGTGGGCTGTCGCAACCGCCGCCCTCCTCGCC
Transcript >Ophio5|2182
ATGGCCAGCCTGCGCCACGCCATCATAGCCGCTCTGGCGCTGGCGTCGCCGTCGACGTGCAAATGCTGCAACGCG
CATTCGCCTTCGGACCCAGCCGGGGCCTGTCCCGGAGAGCTGTCGACCGACTATGCCGGTCCCGTGGCCGCCCCG
GGATGGAGCTACAGGCTCGTGGCCAAGCGGCTCCAGAAGCCGCGCAGTCTGGCCTTCGACTCGGTCGGTAGGCTG
TTGGTCCTGGACGCGGGCGTCGGCGTGCTGGGGATGATGGTGGGGGATGATCAGAGGGGTACCGCCTGCGTGACG
CTCAAGAGGCCGCAGGTCGTCGTCGAGAGCTCCGAGCTCAATCACGGCCTCGCCCTCTCGGCCGACGGCAAGACG
CTCTTCGCCTCGTCGCCGTCGTCCGTCTTCGCTTGGCAGTACGACGCTGCGGCCGGTACGGTAAGAGGTCCTCGG
CGGACCGTCATCGCCAACATGTCGTCATCGGGGGACCAGACCACGACGCGGACCCTCGTCGCGTCTCGCGCTCAG
CCGGGTACGCTCATCGTCTCACGAGGCGTCACTCACGACCATGACGCGTCCGCTCTCGATGAGGGAACCGGCCAT
GCTCAGATCCGAGCTTTTCGTCTGACCGATGATGGCACTCGTGACTTTGCCGACGGCACTCTCCTCGGCTGGGGC
CTACGCAACTCGGTCGGTGTCGCCGAAGACCCGGCCCGGGCCGGCATCTGGTCCGTCGAGAACTCCGTCGATGAG
CTGGTGCGTGTCGGCCGCGACGCCCATACCGACAACCCGGGAGAGGAGCTCAACTATCACGGACGCCTGGGCAGT
CGACAGGACCAGGGCGGCAACTATGGCTTCCCCCGGTGCTTCGCCGTCTGGAATGCGAGCGCCCTTCCGGATCGA
GGTTCGCTCCGGACGGGCGACCAGTTCGCCGGCACCGAGTCGGCATCGGACGAGCAGTGCCGTAACGACTTTGTC
GCCCCTCGTCTGGCATTCGCCGCGCACTCGTCGCCCCTGGATATCAAGTTCGATAGCTCGGGGTCGAGAGCTTTC
CTGTCTTTCCACGGCAGCTGGAACCGCGAGAACCCCATCGGCTACCGCATCGCCGTCGTCACCTTCAACAACGCC
ACGGGCGAGCCCACGTCCCCCCGTGACAGCTCCGACGCCGCCGCCGACGTGCTCACCGTGCCGAACCTGGCCGAC
TGTCCTGACAGATGCTTCCGTCCCGTAGGCCTCGCATTGGACGGGAGCGGCCGGCTCTGGTTCAGCTCCGACAGC
TCGGGCGAAGTCTTTGTTCTGCACCGCGATGAGGATGCCGCCGGCAGCCATGCCGCTCCCAAGCTGATGTCGCGC
CGCACCGCCTTGCTGTGGGCTGTCGCAACCGCCGCCCTCCTCGCCTGA
Gene >Ophio5|2182
ATGGCCAGCCTGCGCCACGCCATCATAGCCGCTCTGGCGCTGGCGTCGCCGTCGACGTGCAAATGCTGCAACGCG
CATTCGCCTTCGGACCCAGCCGGGGCCTGTCCCGGAGAGCTGTCGACCGACTATGCCGGTCCCGTGGCCGCCCCG
GGATGGAGCTACAGGCTCGTGGCCAAGCGGCTCCAGAAGCCGCGCAGTCTGGCCTTCGACTCGGTCGGTAGGCTG
TTGGTCCTGGACGCGGGCGTCGGCGTGCTGGGGATGATGGTGGGGGATGATCAGAGGGGTACCGCCTGCGTGACG
CTCAAGAGGCCGCAGGTCGTCGTCGAGAGCTCCGAGGTGAGTTGAGGTCGGTCGTTGTTGTTGTTGTTGTTGTCC
TTTTGCCAGTCATGGAGCGGGAAGAGCTGAGCTCGAGGTGCTTGAATTCTCTCGTCAGCTCAATCACGGCCTCGC
CCTCTCGGCCGACGGCAAGACGCTCTTCGCCTCGTCGCCGTCGTCCGTCTTCGCTTGGCAGTACGACGCTGCGGC
CGGTACGGTAAGAGGTCCTCGGCGGACCGTCATCGCCAACATGTCGTCATCGGGGGACCAGACCACGACGCGGAC
CCTCGTCGCGTCTCGCGCTCAGCCGGGTACGCTCATCGTCTCACGAGGCGTCACTCACGACCATGACGCGTCCGC
TCTCGATGAGGGAACCGGCCATGCTCAGATCCGAGCTTTTCGTCTGACCGATGATGGCACTCGTGACTTTGCCGA
CGGCACTCTCCTCGGCTGGGGCCTACGCAACTCGGTCGGTGTCGCCGAAGACCCGGCCCGGGCCGGCATCTGGTC
CGTCGAGAACTCCGTCGATGAGCTGGTGCGTGTCGGCCGCGACGCCCATACCGACAACCCGGGAGAGGAGCTCAA
CTATCACGGACGCCTGGGCAGTCGACAGGACCAGGGCGGCAACTATGGCTTCCCCCGGTGCTTCGCCGTCTGGAA
TGCGAGCGCCCTTCCGGATCGAGGTTCGCTCCGGACGGGCGACCAGTTCGCCGGCACCGAGTCGGCATCGGACGA
GCAGTGCCGTAACGACTTTGTCGCCCCTCGTCTGGCATTCGCCGCGCACTCGTCGCCCCTGGATATCAAGTTCGA
TAGCTCGGGGTCGAGAGCTTTCCTGTCTTTCCACGGCAGCTGTGAGTCCGCGCCCTGGCTGTCGCCCGCTGAGAC
AGAACATTCCACCCCCTTTATCGTTTTTTGACGCGTCAAAGGGAACCGCGAGAACCCCATCGGCTACCGCATCGC
CGTCGTCACCTTCAACAACGCCACGGGCGAGCCCACGTCCCCCCGTGACAGCTCCGACGCCGCCGCCGACGTGCT
CACCGTGCCGAACCTGGCCGACTGTCCTGACAGATGCTTCCGTCCCGTAGGCCTCGCATTGGACGGGAGCGGCCG
GCTCTGGTTCAGCTCCGACAGCTCGGGCGAAGTCTTTGTTCTGCACCGCGATGAGGATGCCGCCGGCAGCCATGC
CGCTCCCAAGCTGATGTCGCGCCGCACCGCCTTGCTGTGGGCTGTCGCAACCGCCGCCCTCCTCGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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