Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2159
Gene name
Location	scaffold_189:28783..30216
Strand	-
Gene length (bp)	1433
Transcript length (bp)	1278
Coding sequence length (bp)	1275
Protein length (aa)	425

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04488	Gly_transf_sug	Glycosyltransferase sugar-binding region containing DXD motif	5.7E-11	158	236

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q10323\|IMT3_SCHPO	Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1	125	286	2.0E-16
sp\|O14084\|IMT1_SCHPO	Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2	140	319	7.0E-16
sp\|P33300\|SUR1_YEAST	Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1	119	286	2.0E-13
sp\|P38287\|CSH1_YEAST	Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1	138	286	5.0E-13
sp\|Q9UT67\|IMT2_SCHPO	Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1	141	289	6.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 39	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	74	96	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2159 MEVNSPTPHNSSFCYIRGFDLQLPSLLSPFIWSGSTYSWHASTSISLHQSCPVRHFLSSWRSSFYKVIMFKATLL RPRVLSLVAVILFFFLFHLLHPLPQNRLSFPAAWTAEKTTTWQVARQTTASDLLGRQPPGVRPSRIPSIFHQSWK STELPTKFQHWSATCRKTHPAWEWVIWTDDDNLRLVQKHFPSLEMSYRHLPGEIYRADLSRALYMYIFGGVYADL DMECLRPTEELQKMVAGSFNTPIKAMFGRMGDDPDFQHSIPNAWMLSTPGHPFFLHFLRTIDEQVMDIKANNKSW PDAESLTGPVALREAIAKYEEDKVRRGRRMKDRITQLVKDGPFGESDDLDHQVFLLPSSFIYPYSWGSDGEPIRG QCWVLSDGFDADKCKELLEVRQAKSICITYWSHTHTPTGHDFDNMKHIEG
Coding	>Ophio5\|2159 ATGGAGGTTAACAGTCCAACTCCACATAATTCGAGTTTTTGCTATATCAGAGGGTTCGACTTACAGTTGCCTTCT CTTCTCTCTCCGTTCATCTGGTCAGGTTCGACGTACAGCTGGCACGCCTCGACTTCCATTTCTCTCCATCAATCT TGTCCGGTTCGTCATTTCCTCAGCTCTTGGCGAAGCTCCTTCTACAAGGTAATCATGTTCAAGGCTACTCTCCTG CGTCCCAGAGTGCTATCACTCGTTGCCGTGATCCTTTTCTTCTTCCTTTTCCACCTCCTCCACCCGTTGCCCCAG AACCGGCTCTCCTTTCCAGCGGCATGGACCGCCGAAAAGACCACGACGTGGCAGGTGGCGAGGCAGACGACAGCC TCGGACCTCCTGGGGCGCCAGCCCCCAGGGGTACGGCCATCACGTATCCCAAGTATCTTCCATCAGAGCTGGAAG TCGACTGAGCTGCCGACCAAGTTCCAGCACTGGAGTGCCACCTGCCGCAAAACGCATCCGGCATGGGAGTGGGTG ATTTGGACCGATGACGACAACCTGCGGCTCGTTCAGAAACACTTTCCGAGCCTCGAGATGAGTTATCGCCATCTG CCGGGCGAGATCTACCGTGCAGATCTGTCCAGAGCCCTTTACATGTACATCTTCGGAGGTGTCTATGCCGACCTC GACATGGAATGTCTGCGGCCGACGGAAGAGCTGCAGAAGATGGTTGCCGGCTCCTTCAACACTCCCATCAAAGCC ATGTTCGGCCGCATGGGAGACGACCCGGACTTCCAGCACTCCATCCCGAACGCGTGGATGTTGTCGACGCCGGGC CACCCCTTCTTCCTCCACTTTCTCCGGACCATCGATGAGCAAGTCATGGACATCAAGGCAAACAACAAGTCGTGG CCGGATGCGGAGAGTTTGACGGGGCCGGTTGCATTACGCGAAGCCATCGCCAAATACGAGGAAGACAAGGTGCGC CGCGGGCGTCGGATGAAGGACCGCATCACGCAACTCGTCAAGGATGGGCCCTTTGGTGAATCCGACGACCTAGAC CATCAGGTCTTCCTCTTGCCCAGCAGCTTCATCTACCCATACAGCTGGGGATCCGACGGCGAACCGATCCGCGGC CAGTGTTGGGTCTTGAGCGATGGTTTCGACGCCGACAAGTGCAAGGAGCTGCTCGAGGTCCGTCAGGCAAAGAGC ATATGCATAACGTATTGGAGTCACACGCATACCCCAACGGGGCATGACTTCGACAATATGAAGCATATCGAAGGG
Transcript	>Ophio5\|2159 ATGGAGGTTAACAGTCCAACTCCACATAATTCGAGTTTTTGCTATATCAGAGGGTTCGACTTACAGTTGCCTTCT CTTCTCTCTCCGTTCATCTGGTCAGGTTCGACGTACAGCTGGCACGCCTCGACTTCCATTTCTCTCCATCAATCT TGTCCGGTTCGTCATTTCCTCAGCTCTTGGCGAAGCTCCTTCTACAAGGTAATCATGTTCAAGGCTACTCTCCTG CGTCCCAGAGTGCTATCACTCGTTGCCGTGATCCTTTTCTTCTTCCTTTTCCACCTCCTCCACCCGTTGCCCCAG AACCGGCTCTCCTTTCCAGCGGCATGGACCGCCGAAAAGACCACGACGTGGCAGGTGGCGAGGCAGACGACAGCC TCGGACCTCCTGGGGCGCCAGCCCCCAGGGGTACGGCCATCACGTATCCCAAGTATCTTCCATCAGAGCTGGAAG TCGACTGAGCTGCCGACCAAGTTCCAGCACTGGAGTGCCACCTGCCGCAAAACGCATCCGGCATGGGAGTGGGTG ATTTGGACCGATGACGACAACCTGCGGCTCGTTCAGAAACACTTTCCGAGCCTCGAGATGAGTTATCGCCATCTG CCGGGCGAGATCTACCGTGCAGATCTGTCCAGAGCCCTTTACATGTACATCTTCGGAGGTGTCTATGCCGACCTC GACATGGAATGTCTGCGGCCGACGGAAGAGCTGCAGAAGATGGTTGCCGGCTCCTTCAACACTCCCATCAAAGCC ATGTTCGGCCGCATGGGAGACGACCCGGACTTCCAGCACTCCATCCCGAACGCGTGGATGTTGTCGACGCCGGGC CACCCCTTCTTCCTCCACTTTCTCCGGACCATCGATGAGCAAGTCATGGACATCAAGGCAAACAACAAGTCGTGG CCGGATGCGGAGAGTTTGACGGGGCCGGTTGCATTACGCGAAGCCATCGCCAAATACGAGGAAGACAAGGTGCGC CGCGGGCGTCGGATGAAGGACCGCATCACGCAACTCGTCAAGGATGGGCCCTTTGGTGAATCCGACGACCTAGAC CATCAGGTCTTCCTCTTGCCCAGCAGCTTCATCTACCCATACAGCTGGGGATCCGACGGCGAACCGATCCGCGGC CAGTGTTGGGTCTTGAGCGATGGTTTCGACGCCGACAAGTGCAAGGAGCTGCTCGAGGTCCGTCAGGCAAAGAGC ATATGCATAACGTATTGGAGTCACACGCATACCCCAACGGGGCATGACTTCGACAATATGAAGCATATCGAAGGG TAG
Gene	>Ophio5\|2159 ATGGAGGTTAACAGTCCAACTCCACATAATTCGAGTTTTTGCTATATCAGAGGGTACATATAGCCGGCATTGTTT GGCATTCATCCCTCTACGCTAATTCGGTCAGGTTCGACTTACAGTTGCCTTCTCTTCTCTCTCCGTTCATCTGGT CAGGTTCGACTCACAGTTGCCTTCTCTTCTCTCTCCGTTCATCTGGTCAGGTTCGACGTACAGCTGGCACGCCTC GACTTCCATTTCTCTCCATCAATCTTGTCCGGTTCGTCATTTCCTCAGCTCTTGGCGAAGCTCCTTCTACAAGGT AATCATGTTCAAGGCTACTCTCCTGCGTCCCAGAGTGCTATCACTCGTTGCCGTGATCCTTTTCTTCTTCCTTTT CCACCTCCTCCACCCGTTGCCCCAGAACCGGCTCTCCTTTCCAGCGGCATGGACCGCCGAAAAGACCACGACGTG GCAGGTGGCGAGGCAGACGACAGCCTCGGACCTCCTGGGGCGCCAGCCCCCAGGGGTACGGCCATCACGTATCCC AAGTATCTTCCATCAGAGCTGGAAGTCGACTGAGCTGCCGACCAAGTTCCAGCACTGGAGTGCCACCTGCCGCAA AACGCATCCGGCATGGGAGTGGGTGATTTGGACCGATGACGACAACCTGCGGCTCGTTCAGAAACACTTTCCGAG CCTCGAGATGAGTTATCGCCATCTGCCGGGCGAGATCTACCGTGCAGATCTGTCCAGAGCCCTTTACATGTACAT CTTCGGAGGGTGCGTTCTCCCATTACCAGAATTGACACATGGGAACTGATTGGAGAGAATACAGTGTCTATGCCG ACCTCGACATGGAATGTCTGCGGCCGACGGAAGAGCTGCAGAAGATGGTTGCCGGCTCCTTCAACACTCCCATCA AAGCCATGTTCGGCCGCATGGGAGACGACCCGGACTTCCAGCACTCCATCCCGAACGCGTGGATGTTGTCGACGC CGGGCCACCCCTTCTTCCTCCACTTTCTCCGGACCATCGATGAGCAAGTCATGGACATCAAGGCAAACAACAAGT CGTGGCCGGATGCGGAGAGTTTGACGGGGCCGGTTGCATTACGCGAAGCCATCGCCAAATACGAGGAAGACAAGG TGCGCCGCGGGCGTCGGATGAAGGACCGCATCACGCAACTCGTCAAGGATGGGCCCTTTGGTGAATCCGACGACC TAGACCATCAGGTCTTCCTCTTGCCCAGCAGCTTCATCTACCCATACAGCTGGGGATCCGACGGCGAACCGATCC GCGGCCAGTGTTGGGTCTTGAGCGATGGTTTCGACGCCGACAAGTGCAAGGAGCTGCTCGAGGTCCGTCAGGCAA AGAGCATATGCATAACGTATTGGAGTCACACGCATACCCCAACGGGGCATGACTTCGACAATATGAAGCATATCG AAGGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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