Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2135
Gene name
Locationscaffold_1870:37..973
Strand+
Gene length (bp)936
Transcript length (bp)693
Coding sequence length (bp)690
Protein length (aa) 230

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.45

Transmembrane Domains

Domain # Start End Length
1 116 133 17
2 160 181 21
3 194 216 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2135
MASGVDDGSGARSRFHTSSSTEAGHRSEPRVSINANYEARIKNPLIGIPRRTLLANVDDFCRLKGLESHRDILRK
GALVAQDPTGYEDITGDETLTEVEVEALRNEVLYKWRIPKVLYLTIITCSIGAAVQGWDQTGSNGANLQFPAALG
IGSPGIQDKILVGLVNAAPYIGTALFGCWLSDPINNYFGRRGTIFVAANFCLWPVLACAFCDTWVQLLGCRLLGY
THIYI
Coding >Ophio5|2135
ATGGCATCTGGCGTCGACGACGGCTCTGGCGCCCGCAGCCGTTTTCACACCTCTTCCTCCACTGAGGCCGGTCAT
AGGTCGGAGCCCCGTGTCAGCATCAATGCCAACTACGAAGCCAGGATCAAAAATCCTCTTATCGGCATTCCGCGA
AGGACGCTACTCGCCAACGTCGACGACTTCTGCCGTCTCAAGGGTCTCGAATCCCATCGCGACATCCTTCGCAAG
GGCGCCCTCGTAGCCCAGGATCCGACGGGCTACGAGGACATCACGGGCGACGAGACGCTGACCGAGGTCGAGGTC
GAGGCCCTGCGTAACGAGGTGCTCTACAAGTGGCGCATTCCCAAGGTGCTCTATCTCACCATCATCACCTGCTCC
ATCGGGGCCGCCGTTCAGGGATGGGATCAGACCGGTTCCAATGGCGCCAATTTGCAGTTTCCTGCCGCTCTGGGC
ATCGGCTCGCCGGGGATCCAGGATAAGATACTGGTTGGCTTGGTCAACGCGGCGCCTTACATCGGCACCGCTCTC
TTTGGCTGCTGGCTCTCCGATCCCATCAACAACTACTTTGGCCGTCGCGGAACCATCTTCGTGGCCGCAAACTTT
TGCCTATGGCCCGTTCTCGCCTGTGCCTTTTGTGACACTTGGGTCCAGCTTCTCGGCTGTCGTCTGCTGGGATAT
ACACACATATATATA
Transcript >Ophio5|2135
ATGGCATCTGGCGTCGACGACGGCTCTGGCGCCCGCAGCCGTTTTCACACCTCTTCCTCCACTGAGGCCGGTCAT
AGGTCGGAGCCCCGTGTCAGCATCAATGCCAACTACGAAGCCAGGATCAAAAATCCTCTTATCGGCATTCCGCGA
AGGACGCTACTCGCCAACGTCGACGACTTCTGCCGTCTCAAGGGTCTCGAATCCCATCGCGACATCCTTCGCAAG
GGCGCCCTCGTAGCCCAGGATCCGACGGGCTACGAGGACATCACGGGCGACGAGACGCTGACCGAGGTCGAGGTC
GAGGCCCTGCGTAACGAGGTGCTCTACAAGTGGCGCATTCCCAAGGTGCTCTATCTCACCATCATCACCTGCTCC
ATCGGGGCCGCCGTTCAGGGATGGGATCAGACCGGTTCCAATGGCGCCAATTTGCAGTTTCCTGCCGCTCTGGGC
ATCGGCTCGCCGGGGATCCAGGATAAGATACTGGTTGGCTTGGTCAACGCGGCGCCTTACATCGGCACCGCTCTC
TTTGGCTGCTGGCTCTCCGATCCCATCAACAACTACTTTGGCCGTCGCGGAACCATCTTCGTGGCCGCAAACTTT
TGCCTATGGCCCGTTCTCGCCTGTGCCTTTTGTGACACTTGGGTCCAGCTTCTCGGCTGTCGTCTGCTGGGATAT
ACACACATATATATATAA
Gene >Ophio5|2135
ATGGCATCTGGCGTCGACGACGGCTCTGGGTGAGTACAGCCGTTTTGATACTGGCTTGGACGCTGAATTCATTTC
TTCGTAGCGCCCGCAGCCGTTTTCACACCTCTTCCTCCACTGAGGCCGGTCATAGGTCGGAGCCCCGTGTCAGCA
TCAATGCCAACTACGAAGCCAGGTGTGTGTGCGTGTAATTTTTTTTTTCTTTTCTCCCAACTGTCTTCTGTCCTT
CCCCTATTTGGCCGTCTCGGTCCCTAACTCGTTCGCCTTTGCCTCTCTCCCCCTCCTTTTTGTTTCGTCATGGCA
GGATCAAAAATCCTCTTATCGGCATTCCGCGAAGGACGCTACTCGCCAACGTCGACGACTTCTGCCGTCTCAAGG
GTCTCGAATCCCATCGCGACATCCTTCGCAAGGGCGCCCTCGTAGCCCAGGATCCGACGGGCTACGAGGACATCA
CGGGCGACGAGACGCTGACCGAGGTCGAGGTCGAGGCCCTGCGTAACGAGGTGCTCTACAAGTGGCGCATTCCCA
AGGTGCTCTATCTCACCATCATCACCTGCTCCATCGGGGCCGCCGTTCAGGGATGGGATCAGACCGGTTCCAATG
GCGCCAATTTGCAGTTTCCTGCCGCTCTGGGCATCGGCTCGCCGGGGATCCAGGATAAGATACTGGTTGGCTTGG
TCAACGCGGCGCCTTACATCGGCACCGCTCTCTTTGGCTGCTGGCTCTCCGATCCCATCAACAACTACTTTGGCC
GTCGCGGAACCATCTTCGTGGCCGCAAACTTTTGCCTATGGCCCGTTCTCGCCTGTGCCTTTTGTGACACTTGGG
TCCAGCTTCTCGGCTGTCGTCTGCTGTTGGGCGTTGGTATGGGCACCAAGGCCTCTACAGGTGCGTTTTATCCAC
TCGGCTCGAAGGGGATATACACACATATATATATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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