Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2134
Gene name
Locationscaffold_187:32579..33728
Strand-
Gene length (bp)1149
Transcript length (bp)1149
Coding sequence length (bp)1146
Protein length (aa) 382

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.8E-17 4 297

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 3 382 2.0E-120
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 10 382 4.0E-39
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 382 1.0E-35
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 9 326 1.0E-27
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 5 371 9.0E-26
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 3 382 2.0E-120
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 10 382 4.0E-39
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 382 1.0E-35
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 9 326 1.0E-27
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 5 371 9.0E-26
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 3 352 1.0E-20
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 5 354 8.0E-19
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 3 363 2.0E-16
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 4 380 4.0E-16
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 3 382 3.0E-15
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 1 350 2.0E-14
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 1 377 5.0E-14
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 1 364 5.0E-14
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 9 372 8.0E-13
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 3 240 1.0E-11
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 10 358 5.0E-10
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 3 221 8.0E-10
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 7 236 3.0E-09
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 25 221 2.0E-08
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 1 324 4.0E-08
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 8 354 9.0E-08
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 12 371 2.0E-06
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GO

GO Term Description Terminal node
GO:0022857 transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 22 44 22
2 56 78 22
3 88 110 22
4 166 188 22
5 198 220 22
6 227 246 19
7 256 278 22
8 290 312 22
9 322 344 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2134
MTLVFGSVTLFTAAARSFAAVFALRWFLGMAEAAFYPVAIYYLTTFYRRAELARRLAILTASVGVANGFSGLLAF
AVFRLPSGILLFSWRYLFLVEGAASCLLAMVAFNILPRTAAEARFLNDDERALALRRIRLDSSALVAGQDQEPLK
LVDALRVFAHPTSVAFLAIEVCLGVPLQGVALFLPQIIQRLGYSTIQTNLLTVAPSATGSVVLLVLAFASDAMRL
RFPFVVLAFSLTLTGFVVYAAIDDVEASLRLAYAATFIMCWGSTAPSVLLSTWYNNNVAHEGRRVALTSVGVPLA
NLMGLVAANVFREGDAPKYKPALVTTACFGGAGALITACLGLYMMVDNRRRNAKAGVRLKARDVPTQRLRDGPSV
QDFRWFL
Coding >Ophio5|2134
ATGACGCTCGTCTTCGGCTCCGTCACGCTCTTCACCGCCGCCGCCCGCTCCTTCGCTGCCGTCTTCGCCCTTCGT
TGGTTTCTCGGCATGGCCGAGGCTGCTTTTTACCCCGTCGCCATCTACTATCTCACTACCTTTTATCGCCGTGCT
GAACTCGCTCGTCGACTGGCCATCCTTACGGCTTCGGTTGGCGTCGCCAATGGGTTTAGTGGTCTGCTCGCTTTC
GCCGTCTTTCGTCTGCCGTCCGGCATCTTGCTCTTCTCCTGGCGCTATCTGTTTCTTGTCGAGGGCGCTGCTTCC
TGTCTCTTGGCTATGGTTGCCTTCAATATTCTACCCCGGACTGCGGCCGAGGCTCGCTTTCTAAACGACGACGAG
CGTGCCCTTGCCCTCCGCCGTATCAGGCTCGACTCCTCGGCCCTGGTCGCTGGACAGGATCAAGAGCCCCTGAAG
CTGGTCGACGCCCTGCGCGTCTTCGCCCACCCGACCTCCGTCGCCTTTCTCGCCATCGAAGTCTGCCTCGGCGTG
CCGCTCCAGGGCGTCGCCCTCTTTCTCCCCCAGATCATACAGCGGCTGGGCTACTCGACTATTCAGACCAACCTC
CTGACCGTAGCCCCCAGCGCCACCGGCTCCGTCGTCCTGCTGGTGCTGGCCTTTGCCTCGGACGCGATGCGGCTG
CGCTTCCCCTTTGTCGTCTTGGCCTTTTCCCTGACCTTGACCGGTTTCGTCGTTTACGCTGCCATCGATGACGTC
GAGGCGAGTTTACGGCTCGCCTACGCCGCCACCTTCATCATGTGTTGGGGCTCTACCGCGCCCTCGGTGCTCCTG
TCGACGTGGTATAACAACAACGTTGCTCATGAGGGCCGCCGTGTCGCGTTGACGTCGGTGGGCGTCCCGCTGGCT
AACCTCATGGGCCTGGTCGCTGCCAACGTCTTTCGCGAAGGCGACGCCCCCAAGTACAAGCCCGCTCTCGTCACA
ACCGCCTGCTTCGGCGGCGCCGGGGCTCTCATCACCGCTTGTCTCGGCCTCTACATGATGGTGGATAACCGTCGT
CGCAACGCCAAAGCTGGTGTCCGCCTCAAGGCTCGAGACGTGCCGACCCAGCGGCTGAGGGACGGTCCAAGTGTG
CAAGACTTTCGCTGGTTTCTG
Transcript >Ophio5|2134
ATGACGCTCGTCTTCGGCTCCGTCACGCTCTTCACCGCCGCCGCCCGCTCCTTCGCTGCCGTCTTCGCCCTTCGT
TGGTTTCTCGGCATGGCCGAGGCTGCTTTTTACCCCGTCGCCATCTACTATCTCACTACCTTTTATCGCCGTGCT
GAACTCGCTCGTCGACTGGCCATCCTTACGGCTTCGGTTGGCGTCGCCAATGGGTTTAGTGGTCTGCTCGCTTTC
GCCGTCTTTCGTCTGCCGTCCGGCATCTTGCTCTTCTCCTGGCGCTATCTGTTTCTTGTCGAGGGCGCTGCTTCC
TGTCTCTTGGCTATGGTTGCCTTCAATATTCTACCCCGGACTGCGGCCGAGGCTCGCTTTCTAAACGACGACGAG
CGTGCCCTTGCCCTCCGCCGTATCAGGCTCGACTCCTCGGCCCTGGTCGCTGGACAGGATCAAGAGCCCCTGAAG
CTGGTCGACGCCCTGCGCGTCTTCGCCCACCCGACCTCCGTCGCCTTTCTCGCCATCGAAGTCTGCCTCGGCGTG
CCGCTCCAGGGCGTCGCCCTCTTTCTCCCCCAGATCATACAGCGGCTGGGCTACTCGACTATTCAGACCAACCTC
CTGACCGTAGCCCCCAGCGCCACCGGCTCCGTCGTCCTGCTGGTGCTGGCCTTTGCCTCGGACGCGATGCGGCTG
CGCTTCCCCTTTGTCGTCTTGGCCTTTTCCCTGACCTTGACCGGTTTCGTCGTTTACGCTGCCATCGATGACGTC
GAGGCGAGTTTACGGCTCGCCTACGCCGCCACCTTCATCATGTGTTGGGGCTCTACCGCGCCCTCGGTGCTCCTG
TCGACGTGGTATAACAACAACGTTGCTCATGAGGGCCGCCGTGTCGCGTTGACGTCGGTGGGCGTCCCGCTGGCT
AACCTCATGGGCCTGGTCGCTGCCAACGTCTTTCGCGAAGGCGACGCCCCCAAGTACAAGCCCGCTCTCGTCACA
ACCGCCTGCTTCGGCGGCGCCGGGGCTCTCATCACCGCTTGTCTCGGCCTCTACATGATGGTGGATAACCGTCGT
CGCAACGCCAAAGCTGGTGTCCGCCTCAAGGCTCGAGACGTGCCGACCCAGCGGCTGAGGGACGGTCCAAGTGTG
CAAGACTTTCGCTGGTTTCTGTAA
Gene >Ophio5|2134
ATGACGCTCGTCTTCGGCTCCGTCACGCTCTTCACCGCCGCCGCCCGCTCCTTCGCTGCCGTCTTCGCCCTTCGT
TGGTTTCTCGGCATGGCCGAGGCTGCTTTTTACCCCGTCGCCATCTACTATCTCACTACCTTTTATCGCCGTGCT
GAACTCGCTCGTCGACTGGCCATCCTTACGGCTTCGGTTGGCGTCGCCAATGGGTTTAGTGGTCTGCTCGCTTTC
GCCGTCTTTCGTCTGCCGTCCGGCATCTTGCTCTTCTCCTGGCGCTATCTGTTTCTTGTCGAGGGCGCTGCTTCC
TGTCTCTTGGCTATGGTTGCCTTCAATATTCTACCCCGGACTGCGGCCGAGGCTCGCTTTCTAAACGACGACGAG
CGTGCCCTTGCCCTCCGCCGTATCAGGCTCGACTCCTCGGCCCTGGTCGCTGGACAGGATCAAGAGCCCCTGAAG
CTGGTCGACGCCCTGCGCGTCTTCGCCCACCCGACCTCCGTCGCCTTTCTCGCCATCGAAGTCTGCCTCGGCGTG
CCGCTCCAGGGCGTCGCCCTCTTTCTCCCCCAGATCATACAGCGGCTGGGCTACTCGACTATTCAGACCAACCTC
CTGACCGTAGCCCCCAGCGCCACCGGCTCCGTCGTCCTGCTGGTGCTGGCCTTTGCCTCGGACGCGATGCGGCTG
CGCTTCCCCTTTGTCGTCTTGGCCTTTTCCCTGACCTTGACCGGTTTCGTCGTTTACGCTGCCATCGATGACGTC
GAGGCGAGTTTACGGCTCGCCTACGCCGCCACCTTCATCATGTGTTGGGGCTCTACCGCGCCCTCGGTGCTCCTG
TCGACGTGGTATAACAACAACGTTGCTCATGAGGGCCGCCGTGTCGCGTTGACGTCGGTGGGCGTCCCGCTGGCT
AACCTCATGGGCCTGGTCGCTGCCAACGTCTTTCGCGAAGGCGACGCCCCCAAGTACAAGCCCGCTCTCGTCACA
ACCGCCTGCTTCGGCGGCGCCGGGGCTCTCATCACCGCTTGTCTCGGCCTCTACATGATGGTGGATAACCGTCGT
CGCAACGCCAAAGCTGGTGTCCGCCTCAAGGCTCGAGACGTGCCGACCCAGCGGCTGAGGGACGGTCCAAGTGTG
CAAGACTTTCGCTGGTTTCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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