Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2133
Gene name
Location	scaffold_187:29684..30671
Strand	-
Gene length (bp)	987
Transcript length (bp)	987
Coding sequence length (bp)	984
Protein length (aa)	328

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04616	Glyco_hydro_43	Glycosyl hydrolases family 43	3.0E-32	31	321

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P94489\|XYNB_BACSU	Beta-xylosidase OS=Bacillus subtilis (strain 168) GN=xynB PE=1 SV=2	39	312	5.0E-08
sp\|Q2U1X8\|ABNC_ASPOR	Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=abnC PE=3 SV=1	40	301	1.0E-07
sp\|B8NMD3\|ABNC_ASPFN	Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=abnC PE=3 SV=2	40	301	1.0E-07
sp\|A5AAG2\|ABNC_ASPNC	Probable arabinan endo-1,5-alpha-L-arabinosidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=abnC PE=3 SV=1	40	136	1.0E-06
sp\|A5IKD4\|EABN_THEP1	Extracellular endo-alpha-(1->5)-L-arabinanase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0637 PE=1 SV=1	40	303	5.0E-06

GO

GO Term	Description	Terminal node
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Yes
GO:0005975	carbohydrate metabolic process	Yes
GO:0016787	hydrolase activity	No
GO:0071704	organic substance metabolic process	No
GO:0044238	primary metabolic process	No
GO:0003824	catalytic activity	No
GO:0008150	biological_process	No
GO:0003674	molecular_function	No
GO:0008152	metabolic process	No
GO:0016798	hydrolase activity, acting on glycosyl bonds	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.0957	0.0463	0.964	0.0873	0.0834	0.0364	0.3697	0.3154	0.2143	0.0255

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 20	0.999708

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
GH43_30	3.2E-89	37	313

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID	4
Orthogroup	5465
Change Orthofinder run

Species	Protein ID
Ophiocordyceps camponoti-floridani	Ophcf2\|01656
Ophiocordyceps camponoti-rufipedis	Ophun1\|2989
Ophiocordyceps kimflemingae	Ophio5\|2133 (this protein)
Ophiocordyceps subramaniannii	Hirsu2\|6322

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2133 MLLELGAVVALGWLSTLAEAAAHIRVADAYKPAIHKDFPDPSIVQGTDGLYYAFGTTGGEPVVQVQAARASSPTG PWRRLLHTNILPNSGPLFTGQNTWAPDVQKLDDGSYVMYFSGQLVNNPDHHCVGAATSRSILGPYTPQSQAFACD LSVGGQIDPSGFRDTDGRRYVVYKVDGNSLGNGGQCKNGVEPRKPTPIMLQEVGPNGIDKVGEPVQVLDRVGDEP LVEAPDLYRSSDGTYILFFSSGCFTDPSYNVHYATSRSVKGPYTRASQPLLVSGDSRGLVAPGGASVLAGGNTMV FHANCDTGRCMYVKRFRYRADMVRLLVG
Coding	>Ophio5\|2133 ATGTTGCTCGAGCTCGGTGCGGTGGTGGCCCTCGGCTGGCTCTCGACTCTGGCCGAGGCAGCAGCTCACATCCGG GTCGCCGACGCCTACAAGCCGGCCATACACAAGGACTTCCCCGACCCCAGCATCGTCCAGGGCACCGACGGCCTC TACTATGCCTTTGGCACCACCGGAGGCGAACCGGTCGTCCAAGTCCAGGCCGCCCGCGCAAGCTCCCCGACCGGG CCTTGGAGACGACTCCTCCACACCAACATACTGCCCAACTCGGGTCCGCTCTTCACCGGACAGAATACGTGGGCG CCCGACGTTCAGAAGCTAGACGACGGCTCGTACGTCATGTACTTTAGCGGTCAGCTCGTCAACAACCCGGACCAC CACTGCGTCGGAGCCGCCACCAGCCGCAGCATCTTGGGCCCTTATACGCCCCAGTCCCAGGCCTTTGCCTGTGAC CTCAGCGTCGGCGGCCAGATCGACCCGTCCGGCTTCCGGGACACAGACGGGAGGCGATACGTCGTCTACAAGGTC GACGGAAACAGCCTGGGAAACGGCGGCCAGTGCAAGAACGGCGTCGAGCCGCGGAAGCCGACGCCCATCATGCTA CAGGAGGTCGGTCCCAACGGCATCGACAAGGTGGGAGAGCCCGTCCAAGTCCTGGACCGCGTCGGCGATGAGCCC CTGGTCGAGGCGCCGGACCTCTATCGGAGCTCGGACGGGACGTACATCTTGTTCTTCAGCTCCGGCTGCTTCACG GACCCGAGCTACAACGTCCACTACGCGACTTCTCGCAGCGTCAAGGGGCCTTATACGCGCGCCTCGCAGCCCCTG CTCGTCTCTGGCGACAGTCGGGGCCTGGTAGCCCCTGGCGGCGCCTCCGTCCTGGCCGGAGGAAACACCATGGTC TTCCACGCCAACTGCGACACGGGGAGATGCATGTACGTGAAACGATTCAGATACCGGGCAGACATGGTCAGGTTA TTAGTGGGA
Transcript	>Ophio5\|2133 ATGTTGCTCGAGCTCGGTGCGGTGGTGGCCCTCGGCTGGCTCTCGACTCTGGCCGAGGCAGCAGCTCACATCCGG GTCGCCGACGCCTACAAGCCGGCCATACACAAGGACTTCCCCGACCCCAGCATCGTCCAGGGCACCGACGGCCTC TACTATGCCTTTGGCACCACCGGAGGCGAACCGGTCGTCCAAGTCCAGGCCGCCCGCGCAAGCTCCCCGACCGGG CCTTGGAGACGACTCCTCCACACCAACATACTGCCCAACTCGGGTCCGCTCTTCACCGGACAGAATACGTGGGCG CCCGACGTTCAGAAGCTAGACGACGGCTCGTACGTCATGTACTTTAGCGGTCAGCTCGTCAACAACCCGGACCAC CACTGCGTCGGAGCCGCCACCAGCCGCAGCATCTTGGGCCCTTATACGCCCCAGTCCCAGGCCTTTGCCTGTGAC CTCAGCGTCGGCGGCCAGATCGACCCGTCCGGCTTCCGGGACACAGACGGGAGGCGATACGTCGTCTACAAGGTC GACGGAAACAGCCTGGGAAACGGCGGCCAGTGCAAGAACGGCGTCGAGCCGCGGAAGCCGACGCCCATCATGCTA CAGGAGGTCGGTCCCAACGGCATCGACAAGGTGGGAGAGCCCGTCCAAGTCCTGGACCGCGTCGGCGATGAGCCC CTGGTCGAGGCGCCGGACCTCTATCGGAGCTCGGACGGGACGTACATCTTGTTCTTCAGCTCCGGCTGCTTCACG GACCCGAGCTACAACGTCCACTACGCGACTTCTCGCAGCGTCAAGGGGCCTTATACGCGCGCCTCGCAGCCCCTG CTCGTCTCTGGCGACAGTCGGGGCCTGGTAGCCCCTGGCGGCGCCTCCGTCCTGGCCGGAGGAAACACCATGGTC TTCCACGCCAACTGCGACACGGGGAGATGCATGTACGTGAAACGATTCAGATACCGGGCAGACATGGTCAGGTTA TTAGTGGGATAG
Gene	>Ophio5\|2133 ATGTTGCTCGAGCTCGGTGCGGTGGTGGCCCTCGGCTGGCTCTCGACTCTGGCCGAGGCAGCAGCTCACATCCGG GTCGCCGACGCCTACAAGCCGGCCATACACAAGGACTTCCCCGACCCCAGCATCGTCCAGGGCACCGACGGCCTC TACTATGCCTTTGGCACCACCGGAGGCGAACCGGTCGTCCAAGTCCAGGCCGCCCGCGCAAGCTCCCCGACCGGG CCTTGGAGACGACTCCTCCACACCAACATACTGCCCAACTCGGGTCCGCTCTTCACCGGACAGAATACGTGGGCG CCCGACGTTCAGAAGCTAGACGACGGCTCGTACGTCATGTACTTTAGCGGTCAGCTCGTCAACAACCCGGACCAC CACTGCGTCGGAGCCGCCACCAGCCGCAGCATCTTGGGCCCTTATACGCCCCAGTCCCAGGCCTTTGCCTGTGAC CTCAGCGTCGGCGGCCAGATCGACCCGTCCGGCTTCCGGGACACAGACGGGAGGCGATACGTCGTCTACAAGGTC GACGGAAACAGCCTGGGAAACGGCGGCCAGTGCAAGAACGGCGTCGAGCCGCGGAAGCCGACGCCCATCATGCTA CAGGAGGTCGGTCCCAACGGCATCGACAAGGTGGGAGAGCCCGTCCAAGTCCTGGACCGCGTCGGCGATGAGCCC CTGGTCGAGGCGCCGGACCTCTATCGGAGCTCGGACGGGACGTACATCTTGTTCTTCAGCTCCGGCTGCTTCACG GACCCGAGCTACAACGTCCACTACGCGACTTCTCGCAGCGTCAAGGGGCCTTATACGCGCGCCTCGCAGCCCCTG CTCGTCTCTGGCGACAGTCGGGGCCTGGTAGCCCCTGGCGGCGCCTCCGTCCTGGCCGGAGGAAACACCATGGTC TTCCACGCCAACTGCGACACGGGGAGATGCATGTACGTGAAACGATTCAGATACCGGGCAGACATGGTCAGGTTA TTAGTGGGATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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