Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2120
Gene name
Location	scaffold_1866:170..950
Strand	-
Gene length (bp)	780
Transcript length (bp)	780
Coding sequence length (bp)	777
Protein length (aa)	259

PFAM Domains

(None)

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q99385\|VCX1_YEAST	Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1	4	89	1.0E-18
sp\|Q5KQN0\|CAX2_ORYSJ	Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2	1	84	7.0E-10
sp\|Q75XW3\|CAX_APHHA	Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1	1	79	2.0E-09
sp\|Q39254\|CAX2_ARATH	Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2	1	89	3.0E-09
sp\|Q9LFZ8\|CAX6_ARATH	Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3	1	89	7.0E-08

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q99385\|VCX1_YEAST	Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1	4	89	1.0E-18
sp\|Q5KQN0\|CAX2_ORYSJ	Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2	1	84	7.0E-10
sp\|Q75XW3\|CAX_APHHA	Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1	1	79	2.0E-09
sp\|Q39254\|CAX2_ARATH	Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2	1	89	3.0E-09
sp\|Q9LFZ8\|CAX6_ARATH	Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3	1	89	7.0E-08
sp\|Q8L783\|CAX5_ARATH	Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1	1	79	1.0E-07
sp\|Q6K1C4\|CAX3_ORYSJ	Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2	1	84	2.0E-07
sp\|O59768\|VCX1_SCHPO	Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1	2	82	5.0E-06
sp\|Q6YXZ1\|CAX4_ORYSJ	Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1	1	94	6.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	20	42	22
2	55	74	19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2120 MGCCFFFGGLRRSEQFFNTTVAQTAASLLALAAASVIVPTVFDATQNTPQKDVAALSRGTAVILLIVYASYLFFQ LKTHHSIFSEESRKVPAKPWSGNARGAVHQAVAYPACFISQGVHTEEENERLKRMLVKPLRFNKHGDIIDQADDD DDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATRPSTPRPSPSPSRTR WTSPSESPSDPACRSPSSSYPSSFSSVGSWPRMP
Coding	>Ophio5\|2120 ATGGGCTGCTGCTTCTTCTTCGGCGGCCTCCGTCGATCAGAGCAATTCTTCAACACCACCGTCGCCCAAACGGCA GCCTCGTTGCTCGCTCTGGCGGCCGCGTCGGTCATTGTGCCGACCGTCTTCGACGCGACGCAGAACACGCCGCAG AAGGACGTGGCGGCGCTATCACGCGGCACGGCCGTCATCCTCCTCATCGTCTACGCCTCCTACCTCTTCTTCCAA CTCAAGACGCACCACAGCATCTTCAGCGAGGAGAGTCGGAAGGTGCCGGCCAAGCCGTGGAGTGGAAACGCGCGA GGGGCGGTCCATCAGGCTGTTGCCTACCCGGCCTGTTTCATCAGTCAGGGCGTCCATACGGAGGAGGAGAATGAG CGACTGAAGAGGATGTTGGTGAAGCCGCTTCGCTTCAATAAGCACGGCGACATCATCGACCAAGCCGACGACGAC GACGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGTCGGCAACGCGGCCGAGCACGCCACGGCCGTCACCGTCGCCATCAAGGACAAGA TGGACCTCGCCATCGGAGTCGCCGTCGGATCCAGCATGCAGATCGCCCTCTTCGTCATACCCTTCATCGTTCTCG TCGGTTGGGTCATGGCCAAGGATGCCA
Transcript	>Ophio5\|2120 ATGGGCTGCTGCTTCTTCTTCGGCGGCCTCCGTCGATCAGAGCAATTCTTCAACACCACCGTCGCCCAAACGGCA GCCTCGTTGCTCGCTCTGGCGGCCGCGTCGGTCATTGTGCCGACCGTCTTCGACGCGACGCAGAACACGCCGCAG AAGGACGTGGCGGCGCTATCACGCGGCACGGCCGTCATCCTCCTCATCGTCTACGCCTCCTACCTCTTCTTCCAA CTCAAGACGCACCACAGCATCTTCAGCGAGGAGAGTCGGAAGGTGCCGGCCAAGCCGTGGAGTGGAAACGCGCGA GGGGCGGTCCATCAGGCTGTTGCCTACCCGGCCTGTTTCATCAGTCAGGGCGTCCATACGGAGGAGGAGAATGAG CGACTGAAGAGGATGTTGGTGAAGCCGCTTCGCTTCAATAAGCACGGCGACATCATCGACCAAGCCGACGACGAC GACGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGTCGGCAACGCGGCCGAGCACGCCACGGCCGTCACCGTCGCCATCAAGGACAAGA TGGACCTCGCCATCGGAGTCGCCGTCGGATCCAGCATGCAGATCGCCCTCTTCGTCATACCCTTCATCGTTCTCG TCGGTTGGGTCATGGCCAAGGATGCCATGA
Gene	>Ophio5\|2120 ATGGGCTGCTGCTTCTTCTTCGGCGGCCTCCGTCGATCAGAGCAATTCTTCAACACCACCGTCGCCCAAACGGCA GCCTCGTTGCTCGCTCTGGCGGCCGCGTCGGTCATTGTGCCGACCGTCTTCGACGCGACGCAGAACACGCCGCAG AAGGACGTGGCGGCGCTATCACGCGGCACGGCCGTCATCCTCCTCATCGTCTACGCCTCCTACCTCTTCTTCCAA CTCAAGACGCACCACAGCATCTTCAGCGAGGAGAGTCGGAAGGTGCCGGCCAAGCCGTGGAGTGGAAACGCGCGA GGGGCGGTCCATCAGGCTGTTGCCTACCCGGCCTGTTTCATCAGTCAGGGCGTCCATACGGAGGAGGAGAATGAG CGACTGAAGAGGATGTTGGTGAAGCCGCTTCGCTTCAATAAGCACGGCGACATCATCGACCAAGCCGACGACGAC GACGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNGTCGGCAACGCGGCCGAGCACGCCACGGCCGTCACCGTCGCCATCAAGGACAAGA TGGACCTCGCCATCGGAGTCGCCGTCGGATCCAGCATGCAGATCGCCCTCTTCGTCATACCCTTCATCGTTCTCG TCGGTTGGGTCATGGCCAAGGATGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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