Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|210
Gene name
Locationscaffold_104:5437..7476
Strand-
Gene length (bp)2039
Transcript length (bp)1947
Coding sequence length (bp)1944
Protein length (aa) 648

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17004 SRP_TPR_like Putative TPR-like repeat 2.0E-23 19 149
PF08492 SRP72 SRP72 RNA-binding domain 7.1E-17 559 596

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O76094|SRP72_HUMAN Signal recognition particle subunit SRP72 OS=Homo sapiens GN=SRP72 PE=1 SV=3 20 592 1.0E-42
sp|P33731|SRP72_CANLF Signal recognition particle subunit SRP72 OS=Canis lupus familiaris GN=SRP72 PE=1 SV=3 20 592 3.0E-42
sp|O59787|SRP72_SCHPO Signal recognition particle subunit srp72 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srp72 PE=3 SV=1 45 613 5.0E-37
sp|P91240|SRP72_CAEEL Signal recognition particle subunit SRP72 OS=Caenorhabditis elegans GN=srpa-72 PE=3 SV=2 14 612 8.0E-29
sp|P49965|SRP72_SCHMA Signal recognition particle subunit SRP72 OS=Schistosoma mansoni GN=SRP72 PE=3 SV=1 12 642 1.0E-15
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Swissprot ID Swissprot Description Start End E-value
sp|O76094|SRP72_HUMAN Signal recognition particle subunit SRP72 OS=Homo sapiens GN=SRP72 PE=1 SV=3 20 592 1.0E-42
sp|P33731|SRP72_CANLF Signal recognition particle subunit SRP72 OS=Canis lupus familiaris GN=SRP72 PE=1 SV=3 20 592 3.0E-42
sp|O59787|SRP72_SCHPO Signal recognition particle subunit srp72 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srp72 PE=3 SV=1 45 613 5.0E-37
sp|P91240|SRP72_CAEEL Signal recognition particle subunit SRP72 OS=Caenorhabditis elegans GN=srpa-72 PE=3 SV=2 14 612 8.0E-29
sp|P49965|SRP72_SCHMA Signal recognition particle subunit SRP72 OS=Schistosoma mansoni GN=SRP72 PE=3 SV=1 12 642 1.0E-15
sp|P38688|SRP72_YEAST Signal recognition particle subunit SRP72 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP72 PE=1 SV=2 575 626 6.0E-08
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GO

GO Term Description Terminal node
GO:0006614 SRP-dependent cotranslational protein targeting to membrane Yes
GO:0048500 signal recognition particle Yes
GO:0008312 7S RNA binding Yes
GO:0051234 establishment of localization No
GO:0072599 establishment of protein localization to endoplasmic reticulum No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0006810 transport No
GO:0006886 intracellular protein transport No
GO:1990904 ribonucleoprotein complex No
GO:0003676 nucleic acid binding No
GO:0006612 protein targeting to membrane No
GO:0005488 binding No
GO:0006613 cotranslational protein targeting to membrane No
GO:0033365 protein localization to organelle No
GO:0071705 nitrogen compound transport No
GO:0032991 protein-containing complex No
GO:0070727 cellular macromolecule localization No
GO:0045047 protein targeting to ER No
GO:0008150 biological_process No
GO:0070972 protein localization to endoplasmic reticulum No
GO:0090150 establishment of protein localization to membrane No
GO:0006605 protein targeting No
GO:0015031 protein transport No
GO:0071702 organic substance transport No
GO:0003723 RNA binding No
GO:0072657 protein localization to membrane No
GO:0097159 organic cyclic compound binding No
GO:0046907 intracellular transport No
GO:0005575 cellular_component No
GO:0033036 macromolecule localization No
GO:0072594 establishment of protein localization to organelle No
GO:0008104 protein localization No
GO:1901363 heterocyclic compound binding No
GO:0051649 establishment of localization in cell No
GO:0051668 localization within membrane No
GO:0051641 cellular localization No
GO:0009987 cellular process No
GO:0045184 establishment of protein localization No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3815 0.7974 0.0055 0.0115 0.0842 0.0101 0.2002 0.0084 0.0683 0.0027

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup4836
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|297
Ophiocordyceps australis map64 (Brazil) OphauB2|5714
Ophiocordyceps camponoti-floridani Ophcf2|06084
Ophiocordyceps camponoti-rufipedis Ophun1|3869
Ophiocordyceps kimflemingae Ophio5|210 (this protein)
Ophiocordyceps subramaniannii Hirsu2|1079

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|210
MPQDATVALGVLLRSASIDDHDEILKAANAAIKADKHNQVAQRTRVIALLKLDRFGDALRAISEGDDKLQSACLL
EKAYSLYKTGRLDEASAVLDSADFEERSFKHVAAQVAYRAERFGEADAIYRHLMDANMAHEGNDLSINIKAAQAQ
SEWQGSASASSDAADASPDTFELCYNTACAHIALESLETASDLLLRAVDLCSASDDLTQEDRDAELQPILAQQAY
LYGRLGDADKALSIYRSLHSGSTDDPDLSIVAQSNRTALLRDKSNPYLLQRRAAAWMSGAATAKLFHNQSNAILR
NALLVDLEAQKIDGVEHRTRKVLDQARHPTTSPEITAMTVLNAAAQTKGLRKKELRQRVADILKKRPDSVALVVI
MMQLHLRDGNVESALSLLDTLFTRLEGSASDQDRDVRFSPGLVALAVSLMKVKRREASIKAELSKAATYWRDRPL
ASSASLLREAGLELAKSTNPAHLSLAATALERVHDERKGSPLVSAGLIAALAATDASQVEQLTADLPSVESLIGG
IDVEALTGAGIATPASHAATGLKRPLLDSAVGENAAKKRRRRTRLPKNLDEGKAPDPERWLPLRDRSTYRPKGKK
GKKKMADSTQGGLVKQEETLELVGGGGVKVEKTSAVSSARKKKKKGKK
Coding >Ophio5|210
ATGCCTCAGGACGCCACCGTTGCCCTCGGCGTCTTGCTACGCTCTGCTTCCATCGACGACCATGACGAGATCCTC
AAGGCCGCCAACGCCGCCATTAAAGCCGACAAACACAACCAGGTTGCCCAACGTACCCGGGTCATCGCATTACTA
AAGCTCGACCGCTTCGGAGACGCTCTTCGTGCCATTTCCGAAGGCGACGACAAGCTTCAGTCGGCGTGCCTGCTC
GAGAAGGCCTACTCCCTCTATAAAACGGGACGGCTCGACGAAGCTTCCGCTGTCCTTGACTCGGCCGACTTCGAG
GAGAGGAGCTTCAAACATGTTGCCGCTCAGGTTGCCTACCGAGCCGAGAGATTCGGCGAGGCCGACGCCATCTAC
CGACACCTCATGGACGCCAATATGGCCCACGAGGGCAATGACCTGAGCATCAACATCAAGGCCGCCCAGGCTCAG
TCTGAGTGGCAGGGGTCCGCTTCCGCTTCATCCGATGCTGCAGACGCCAGCCCTGACACGTTCGAACTCTGCTAC
AATACTGCTTGCGCTCACATCGCCCTCGAGTCCCTCGAGACGGCATCCGACCTTCTGCTGCGCGCCGTTGACTTG
TGCAGTGCCTCGGATGACTTGACACAAGAAGACAGAGACGCTGAGCTGCAGCCTATACTTGCCCAACAAGCCTAC
CTCTATGGCCGCTTAGGAGACGCCGATAAGGCCCTGAGCATCTATCGATCACTCCATTCGGGCAGTACTGACGAT
CCGGATTTATCCATTGTGGCCCAGAGCAATCGAACCGCCTTGCTGAGGGATAAATCCAACCCCTACCTACTCCAG
CGCCGAGCTGCCGCTTGGATGTCCGGCGCCGCAACTGCCAAGCTCTTTCACAACCAATCCAACGCAATCCTGCGC
AATGCCCTTTTGGTGGACCTCGAAGCGCAAAAGATTGATGGGGTCGAACATAGGACACGCAAGGTCCTGGATCAG
GCGCGTCATCCCACTACGAGCCCTGAAATCACTGCCATGACTGTCCTGAACGCCGCTGCTCAGACGAAAGGGCTG
CGGAAAAAGGAGTTACGCCAAAGAGTAGCCGACATACTGAAGAAACGTCCAGATAGCGTTGCTCTCGTCGTTATT
ATGATGCAGCTCCACTTACGGGACGGCAACGTCGAGTCTGCCCTGTCTTTATTGGATACATTGTTCACCCGGCTC
GAGGGCTCCGCCAGCGACCAGGATCGAGACGTTCGCTTCAGCCCAGGTCTCGTCGCCCTGGCGGTGTCACTGATG
AAAGTAAAGAGGAGGGAGGCCTCGATCAAAGCCGAATTGAGCAAGGCAGCAACCTACTGGCGTGACAGGCCCTTG
GCTTCGTCTGCCTCGCTCCTCAGAGAGGCTGGCTTGGAGTTAGCTAAATCGACGAACCCTGCACACCTCTCCCTC
GCTGCCACGGCCCTCGAACGGGTCCACGATGAGAGGAAAGGCTCGCCGCTGGTCTCAGCCGGGCTGATAGCGGCG
CTGGCCGCGACCGACGCGTCGCAGGTCGAGCAGCTCACCGCGGATCTGCCGTCTGTCGAAAGCCTGATCGGTGGG
ATAGACGTCGAAGCCCTGACCGGCGCAGGAATTGCCACGCCCGCTTCCCACGCCGCCACAGGCTTGAAGCGGCCC
CTCTTGGACAGCGCCGTCGGCGAGAACGCCGCCAAGAAGCGCAGGAGGAGGACGAGGCTGCCCAAGAACCTGGAC
GAGGGCAAGGCGCCCGATCCCGAGCGCTGGCTTCCCCTCCGCGACCGGTCGACCTATCGGCCCAAGGGCAAAAAG
GGCAAGAAGAAGATGGCCGACTCGACCCAGGGTGGCCTCGTCAAGCAGGAGGAGACGCTCGAGCTGGTCGGCGGC
GGAGGCGTCAAGGTGGAGAAGACGTCGGCTGTGAGCTCGGCCAGGAAGAAGAAGAAGAAGGGCAAGAAA
Transcript >Ophio5|210
ATGCCTCAGGACGCCACCGTTGCCCTCGGCGTCTTGCTACGCTCTGCTTCCATCGACGACCATGACGAGATCCTC
AAGGCCGCCAACGCCGCCATTAAAGCCGACAAACACAACCAGGTTGCCCAACGTACCCGGGTCATCGCATTACTA
AAGCTCGACCGCTTCGGAGACGCTCTTCGTGCCATTTCCGAAGGCGACGACAAGCTTCAGTCGGCGTGCCTGCTC
GAGAAGGCCTACTCCCTCTATAAAACGGGACGGCTCGACGAAGCTTCCGCTGTCCTTGACTCGGCCGACTTCGAG
GAGAGGAGCTTCAAACATGTTGCCGCTCAGGTTGCCTACCGAGCCGAGAGATTCGGCGAGGCCGACGCCATCTAC
CGACACCTCATGGACGCCAATATGGCCCACGAGGGCAATGACCTGAGCATCAACATCAAGGCCGCCCAGGCTCAG
TCTGAGTGGCAGGGGTCCGCTTCCGCTTCATCCGATGCTGCAGACGCCAGCCCTGACACGTTCGAACTCTGCTAC
AATACTGCTTGCGCTCACATCGCCCTCGAGTCCCTCGAGACGGCATCCGACCTTCTGCTGCGCGCCGTTGACTTG
TGCAGTGCCTCGGATGACTTGACACAAGAAGACAGAGACGCTGAGCTGCAGCCTATACTTGCCCAACAAGCCTAC
CTCTATGGCCGCTTAGGAGACGCCGATAAGGCCCTGAGCATCTATCGATCACTCCATTCGGGCAGTACTGACGAT
CCGGATTTATCCATTGTGGCCCAGAGCAATCGAACCGCCTTGCTGAGGGATAAATCCAACCCCTACCTACTCCAG
CGCCGAGCTGCCGCTTGGATGTCCGGCGCCGCAACTGCCAAGCTCTTTCACAACCAATCCAACGCAATCCTGCGC
AATGCCCTTTTGGTGGACCTCGAAGCGCAAAAGATTGATGGGGTCGAACATAGGACACGCAAGGTCCTGGATCAG
GCGCGTCATCCCACTACGAGCCCTGAAATCACTGCCATGACTGTCCTGAACGCCGCTGCTCAGACGAAAGGGCTG
CGGAAAAAGGAGTTACGCCAAAGAGTAGCCGACATACTGAAGAAACGTCCAGATAGCGTTGCTCTCGTCGTTATT
ATGATGCAGCTCCACTTACGGGACGGCAACGTCGAGTCTGCCCTGTCTTTATTGGATACATTGTTCACCCGGCTC
GAGGGCTCCGCCAGCGACCAGGATCGAGACGTTCGCTTCAGCCCAGGTCTCGTCGCCCTGGCGGTGTCACTGATG
AAAGTAAAGAGGAGGGAGGCCTCGATCAAAGCCGAATTGAGCAAGGCAGCAACCTACTGGCGTGACAGGCCCTTG
GCTTCGTCTGCCTCGCTCCTCAGAGAGGCTGGCTTGGAGTTAGCTAAATCGACGAACCCTGCACACCTCTCCCTC
GCTGCCACGGCCCTCGAACGGGTCCACGATGAGAGGAAAGGCTCGCCGCTGGTCTCAGCCGGGCTGATAGCGGCG
CTGGCCGCGACCGACGCGTCGCAGGTCGAGCAGCTCACCGCGGATCTGCCGTCTGTCGAAAGCCTGATCGGTGGG
ATAGACGTCGAAGCCCTGACCGGCGCAGGAATTGCCACGCCCGCTTCCCACGCCGCCACAGGCTTGAAGCGGCCC
CTCTTGGACAGCGCCGTCGGCGAGAACGCCGCCAAGAAGCGCAGGAGGAGGACGAGGCTGCCCAAGAACCTGGAC
GAGGGCAAGGCGCCCGATCCCGAGCGCTGGCTTCCCCTCCGCGACCGGTCGACCTATCGGCCCAAGGGCAAAAAG
GGCAAGAAGAAGATGGCCGACTCGACCCAGGGTGGCCTCGTCAAGCAGGAGGAGACGCTCGAGCTGGTCGGCGGC
GGAGGCGTCAAGGTGGAGAAGACGTCGGCTGTGAGCTCGGCCAGGAAGAAGAAGAAGAAGGGCAAGAAATAG
Gene >Ophio5|210
ATGCCTCAGGACGCCACCGTTGCCCTCGGCGTCTTGCTACGCTCTGCTTCCATCGACGACCATGACGAGATCCTC
AAGGCCGCCAACGCCGCCATTAAAGCCGACAAACACAACCAGGTTGCCCAACGTACCCGGGTCATCGCATTACTA
AAGCTCGACCGCTTCGGAGACGCTCTTCGTGCCATTTCCGAAGGCGACGACAAGCTTCAGTCGGCGTGCCTGCTC
GAGAAGGCCTACTCCCTCTATAAAACGGGACGGCTCGACGAAGCTTCCGCTGTCCTTGACTCGGCCGACTTCGAG
GAGAGGAGCTTCAAACATGTTGCCGCTCAGGTTGCCTACCGAGCCGAGAGATTCGGCGAGGCCGACGCCATCTAC
CGACACCTCATGGACGCCAATATGGCCCACGAGGGCAATGACCTGAGCATCAACATCAAGGCCGCCCAGGCTCAG
TCTGAGTGGCAGGGGTCCGCTTCCGCTTCATCCGATGCTGCAGACGCCAGCCCTGACACGTTCGAACTCTGCTAC
AATACTGCTTGCGCTCACATCGCCCTCGAGTCCCTCGAGACGGCATCCGACCTTCTGCTGCGCGCCGTTGACTTG
TGCAGTGCCTCGGATGACTTGACACAAGAAGACAGAGACGCTGAGCTGCAGCCTATACTTGCCCAACAAGCCTAC
CTCTATGGCCGCTTAGGAGACGCCGATAAGGCCCTGAGCATCTATCGATCACTCCATTCGGGCAGGTCAGTCTCT
GGCTGAATTGCAAGCCCGTCTACTGGAGACGCGCACACCCCTAAAAGTAGCCGATAGAAGCTGACCGCGTCGGTC
TCCTCAGTACTGACGATCCGGATTTATCCATTGTGGCCCAGAGCAATCGAACCGCCTTGCTGAGGGATAAATCCA
ACCCCTACCTACTCCAGCGCCGAGCTGCCGCTTGGATGTCCGGCGCCGCAACTGCCAAGCTCTTTCACAACCAAT
CCAACGCAATCCTGCGCAATGCCCTTTTGGTGGACCTCGAAGCGCAAAAGATTGATGGGGTCGAACATAGGACAC
GCAAGGTCCTGGATCAGGCGCGTCATCCCACTACGAGCCCTGAAATCACTGCCATGACTGTCCTGAACGCCGCTG
CTCAGACGAAAGGGCTGCGGAAAAAGGAGTTACGCCAAAGAGTAGCCGACATACTGAAGAAACGTCCAGATAGCG
TTGCTCTCGTCGTTATTATGATGCAGCTCCACTTACGGGACGGCAACGTCGAGTCTGCCCTGTCTTTATTGGATA
CATTGTTCACCCGGCTCGAGGGCTCCGCCAGCGACCAGGATCGAGACGTTCGCTTCAGCCCAGGTCTCGTCGCCC
TGGCGGTGTCACTGATGAAAGTAAAGAGGAGGGAGGCCTCGATCAAAGCCGAATTGAGCAAGGCAGCAACCTACT
GGCGTGACAGGCCCTTGGCTTCGTCTGCCTCGCTCCTCAGAGAGGCTGGCTTGGAGTTAGCTAAATCGACGAACC
CTGCACACCTCTCCCTCGCTGCCACGGCCCTCGAACGGGTCCACGATGAGAGGAAAGGCTCGCCGCTGGTCTCAG
CCGGGCTGATAGCGGCGCTGGCCGCGACCGACGCGTCGCAGGTCGAGCAGCTCACCGCGGATCTGCCGTCTGTCG
AAAGCCTGATCGGTGGGATAGACGTCGAAGCCCTGACCGGCGCAGGAATTGCCACGCCCGCTTCCCACGCCGCCA
CAGGCTTGAAGCGGCCCCTCTTGGACAGCGCCGTCGGCGAGAACGCCGCCAAGAAGCGCAGGAGGAGGACGAGGC
TGCCCAAGAACCTGGACGAGGGCAAGGCGCCCGATCCCGAGCGCTGGCTTCCCCTCCGCGACCGGTCGACCTATC
GGCCCAAGGGCAAAAAGGGCAAGAAGAAGATGGCCGACTCGACCCAGGGTGGCCTCGTCAAGCAGGAGGAGACGC
TCGAGCTGGTCGGCGGCGGAGGCGTCAAGGTGGAGAAGACGTCGGCTGTGAGCTCGGCCAGGAAGAAGAAGAAGA
AGGGCAAGAAATAG

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