Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|2086
Gene name
Locationscaffold_184:13120..13844
Strand-
Gene length (bp)724
Transcript length (bp)666
Coding sequence length (bp)663
Protein length (aa) 221

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 41 177 2.0E-08
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 52 199 2.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|2086
MHFSSFAVAALVGAAQANLFSRQEEGGTQGGQKVHVVNVGLNPLTNQTAKKYFPDKVDAQPGEVVQFRFSAPGSM
HTVTQSDFNTPCVAKAGGFNSGAQAVKAGSTETMVYNLVVNDTGAIWCYCATGDHCMSKMTMVINEGAAVKANSS
RTGEAYADLASQFKGKSTTSGSSGSTTSGAPNTGNAGSSTGTPSASSATSNNVVAVPATVMLFLGAAFMLL
Coding >Ophio5|2086
ATGCACTTTAGTTCGTTCGCCGTTGCCGCCCTGGTAGGCGCCGCTCAGGCAAATCTCTTCTCTCGCCAAGAAGAA
GGGGGCACGCAGGGAGGCCAGAAGGTTCACGTGGTCAACGTCGGCCTGAATCCCTTGACGAACCAGACAGCCAAG
AAGTATTTCCCCGACAAGGTGGACGCGCAACCGGGAGAGGTGGTGCAGTTCCGCTTCAGCGCCCCCGGCAGCATG
CACACCGTCACCCAGTCCGACTTCAACACCCCCTGCGTGGCAAAGGCCGGCGGCTTCAACTCGGGCGCCCAGGCC
GTCAAGGCGGGCTCTACCGAGACTATGGTCTACAACCTCGTCGTCAACGACACCGGCGCCATCTGGTGTTACTGC
GCGACAGGAGACCACTGCATGAGCAAGATGACCATGGTCATCAACGAGGGCGCCGCCGTCAAGGCCAACTCGTCC
CGGACGGGAGAGGCCTATGCCGACCTGGCCTCTCAGTTCAAGGGTAAGAGCACGACCAGTGGCAGCAGCGGCAGC
ACCACCAGCGGTGCTCCAAACACGGGCAACGCTGGTTCCTCGACCGGCACGCCCTCGGCCAGCTCTGCTACCTCG
AACAACGTCGTCGCCGTCCCGGCCACCGTCATGCTCTTCCTCGGTGCCGCCTTCATGCTCCTG
Transcript >Ophio5|2086
ATGCACTTTAGTTCGTTCGCCGTTGCCGCCCTGGTAGGCGCCGCTCAGGCAAATCTCTTCTCTCGCCAAGAAGAA
GGGGGCACGCAGGGAGGCCAGAAGGTTCACGTGGTCAACGTCGGCCTGAATCCCTTGACGAACCAGACAGCCAAG
AAGTATTTCCCCGACAAGGTGGACGCGCAACCGGGAGAGGTGGTGCAGTTCCGCTTCAGCGCCCCCGGCAGCATG
CACACCGTCACCCAGTCCGACTTCAACACCCCCTGCGTGGCAAAGGCCGGCGGCTTCAACTCGGGCGCCCAGGCC
GTCAAGGCGGGCTCTACCGAGACTATGGTCTACAACCTCGTCGTCAACGACACCGGCGCCATCTGGTGTTACTGC
GCGACAGGAGACCACTGCATGAGCAAGATGACCATGGTCATCAACGAGGGCGCCGCCGTCAAGGCCAACTCGTCC
CGGACGGGAGAGGCCTATGCCGACCTGGCCTCTCAGTTCAAGGGTAAGAGCACGACCAGTGGCAGCAGCGGCAGC
ACCACCAGCGGTGCTCCAAACACGGGCAACGCTGGTTCCTCGACCGGCACGCCCTCGGCCAGCTCTGCTACCTCG
AACAACGTCGTCGCCGTCCCGGCCACCGTCATGCTCTTCCTCGGTGCCGCCTTCATGCTCCTGTAG
Gene >Ophio5|2086
ATGCACTTTAGTTCGTTCGCCGTTGCCGCCCTGGTAGGCGCCGCTCAGGGTGAGTCATGGTCGTCTGTCTTTTTT
TCCTCAAGTCGGCGAGACTAACAAAAAGATAGCAAATCTCTTCTCTCGCCAAGAAGAAGGGGGCACGCAGGGAGG
CCAGAAGGTTCACGTGGTCAACGTCGGCCTGAATCCCTTGACGAACCAGACAGCCAAGAAGTATTTCCCCGACAA
GGTGGACGCGCAACCGGGAGAGGTGGTGCAGTTCCGCTTCAGCGCCCCCGGCAGCATGCACACCGTCACCCAGTC
CGACTTCAACACCCCCTGCGTGGCAAAGGCCGGCGGCTTCAACTCGGGCGCCCAGGCCGTCAAGGCGGGCTCTAC
CGAGACTATGGTCTACAACCTCGTCGTCAACGACACCGGCGCCATCTGGTGTTACTGCGCGACAGGAGACCACTG
CATGAGCAAGATGACCATGGTCATCAACGAGGGCGCCGCCGTCAAGGCCAACTCGTCCCGGACGGGAGAGGCCTA
TGCCGACCTGGCCTCTCAGTTCAAGGGTAAGAGCACGACCAGTGGCAGCAGCGGCAGCACCACCAGCGGTGCTCC
AAACACGGGCAACGCTGGTTCCTCGACCGGCACGCCCTCGGCCAGCTCTGCTACCTCGAACAACGTCGTCGCCGT
CCCGGCCACCGTCATGCTCTTCCTCGGTGCCGCCTTCATGCTCCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail