© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|2073 |
| Gene name | |
| Location | scaffold_183:20775..21549 |
| Strand | - |
| Gene length (bp) | 774 |
| Transcript length (bp) | 774 |
| Coding sequence length (bp) | 771 |
| Protein length (aa) | 257 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13649 | Methyltransf_25 | Methyltransferase domain | 5.6E-13 | 46 | 149 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.7E-10 | 47 | 151 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 1.9E-09 | 47 | 151 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 1.5E-07 | 43 | 152 |
| PF06325 | PrmA | Ribosomal protein L11 methyltransferase (PrmA) | 9.9E-06 | 43 | 152 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 7.2E-05 | 24 | 151 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A5IN97|PRMA_THEP1 | Ribosomal protein L11 methyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=prmA PE=3 SV=1 | 25 | 134 | 2.0E-07 |
| sp|B9K9N3|PRMA_THENN | Ribosomal protein L11 methyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=prmA PE=3 SV=1 | 25 | 137 | 2.0E-07 |
| sp|Q9X0G8|PRMA_THEMA | Ribosomal protein L11 methyltransferase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=prmA PE=3 SV=1 | 25 | 134 | 2.0E-07 |
| sp|B1L841|PRMA_THESQ | Ribosomal protein L11 methyltransferase OS=Thermotoga sp. (strain RQ2) GN=prmA PE=3 SV=1 | 25 | 134 | 3.0E-07 |
| sp|O86951|PRMA_THENE | Ribosomal protein L11 methyltransferase OS=Thermotoga neapolitana GN=prmA PE=3 SV=2 | 25 | 137 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|2073 MTVSERLQYDVIGNDYARYTAVTLPFAKMAAEFIGKALGNCDGLTVLDLGGGNGLFARRALKAGAKYVDVVDISE TMIELGKGNNEGEGRLRWHIADVTRPLREQCHLSLLDGQYDIVMGNWLHESAVKSVEDLEPIWQNVVDYLKPGGT FLGSRTLYPGVCGDATKGKYGATLVDMKEIPGGWRYRLRMQMEPPFVLEGTAMRDNCTMQNEIPRRLGLTDFRAL AIEDTALYASDPEFWKEARDDPSFTVVISRKL |
| Coding | >Ophio5|2073 ATGACTGTCTCAGAAAGGTTGCAATACGACGTGATTGGCAACGATTACGCAAGGTACACTGCGGTAACCCTTCCG TTTGCCAAGATGGCAGCCGAGTTCATCGGCAAAGCGCTTGGGAATTGCGACGGACTCACGGTTCTCGATCTCGGC GGCGGCAATGGTTTATTTGCCCGACGGGCCTTGAAAGCCGGCGCAAAATATGTCGATGTCGTCGACATCTCCGAG ACCATGATAGAGCTCGGGAAGGGCAACAATGAGGGGGAGGGTCGCCTTCGCTGGCACATAGCCGACGTGACCAGG CCGCTACGGGAACAGTGTCACCTCAGCCTTCTGGACGGGCAGTACGACATTGTGATGGGCAACTGGCTCCATGAG AGTGCGGTCAAGTCGGTCGAGGATCTCGAACCCATATGGCAAAATGTTGTAGATTACCTCAAACCCGGCGGCACG TTTCTCGGCTCCAGGACTCTTTACCCTGGCGTCTGCGGCGATGCTACAAAGGGCAAGTATGGCGCCACGCTGGTG GATATGAAAGAGATACCTGGCGGATGGCGATACCGTCTACGCATGCAGATGGAGCCGCCTTTCGTCCTCGAGGGG ACGGCGATGCGAGACAATTGCACCATGCAGAATGAGATACCGCGAAGACTGGGCCTGACGGACTTCAGGGCCCTG GCAATAGAGGACACGGCTCTGTACGCGTCTGATCCCGAGTTTTGGAAAGAGGCGCGGGATGATCCCTCGTTCACT GTTGTGATCTCAAGGAAGCTT |
| Transcript | >Ophio5|2073 ATGACTGTCTCAGAAAGGTTGCAATACGACGTGATTGGCAACGATTACGCAAGGTACACTGCGGTAACCCTTCCG TTTGCCAAGATGGCAGCCGAGTTCATCGGCAAAGCGCTTGGGAATTGCGACGGACTCACGGTTCTCGATCTCGGC GGCGGCAATGGTTTATTTGCCCGACGGGCCTTGAAAGCCGGCGCAAAATATGTCGATGTCGTCGACATCTCCGAG ACCATGATAGAGCTCGGGAAGGGCAACAATGAGGGGGAGGGTCGCCTTCGCTGGCACATAGCCGACGTGACCAGG CCGCTACGGGAACAGTGTCACCTCAGCCTTCTGGACGGGCAGTACGACATTGTGATGGGCAACTGGCTCCATGAG AGTGCGGTCAAGTCGGTCGAGGATCTCGAACCCATATGGCAAAATGTTGTAGATTACCTCAAACCCGGCGGCACG TTTCTCGGCTCCAGGACTCTTTACCCTGGCGTCTGCGGCGATGCTACAAAGGGCAAGTATGGCGCCACGCTGGTG GATATGAAAGAGATACCTGGCGGATGGCGATACCGTCTACGCATGCAGATGGAGCCGCCTTTCGTCCTCGAGGGG ACGGCGATGCGAGACAATTGCACCATGCAGAATGAGATACCGCGAAGACTGGGCCTGACGGACTTCAGGGCCCTG GCAATAGAGGACACGGCTCTGTACGCGTCTGATCCCGAGTTTTGGAAAGAGGCGCGGGATGATCCCTCGTTCACT GTTGTGATCTCAAGGAAGCTTTGA |
| Gene | >Ophio5|2073 ATGACTGTCTCAGAAAGGTTGCAATACGACGTGATTGGCAACGATTACGCAAGGTACACTGCGGTAACCCTTCCG TTTGCCAAGATGGCAGCCGAGTTCATCGGCAAAGCGCTTGGGAATTGCGACGGACTCACGGTTCTCGATCTCGGC GGCGGCAATGGTTTATTTGCCCGACGGGCCTTGAAAGCCGGCGCAAAATATGTCGATGTCGTCGACATCTCCGAG ACCATGATAGAGCTCGGGAAGGGCAACAATGAGGGGGAGGGTCGCCTTCGCTGGCACATAGCCGACGTGACCAGG CCGCTACGGGAACAGTGTCACCTCAGCCTTCTGGACGGGCAGTACGACATTGTGATGGGCAACTGGCTCCATGAG AGTGCGGTCAAGTCGGTCGAGGATCTCGAACCCATATGGCAAAATGTTGTAGATTACCTCAAACCCGGCGGCACG TTTCTCGGCTCCAGGACTCTTTACCCTGGCGTCTGCGGCGATGCTACAAAGGGCAAGTATGGCGCCACGCTGGTG GATATGAAAGAGATACCTGGCGGATGGCGATACCGTCTACGCATGCAGATGGAGCCGCCTTTCGTCCTCGAGGGG ACGGCGATGCGAGACAATTGCACCATGCAGAATGAGATACCGCGAAGACTGGGCCTGACGGACTTCAGGGCCCTG GCAATAGAGGACACGGCTCTGTACGCGTCTGATCCCGAGTTTTGGAAAGAGGCGCGGGATGATCCCTCGTTCACT GTTGTGATCTCAAGGAAGCTTTGA |