Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2061
Gene name
Location	scaffold_182:30474..30975
Strand	-
Gene length (bp)	501
Transcript length (bp)	501
Coding sequence length (bp)	498
Protein length (aa)	166

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	60	82	22
2	89	111	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2061 MATSSLGLDLLRLAPLLSSTCSLLYAWDQHFFLGLLNRPEIRLRSRALLPTYFTHVFRRGLPFVLAAVAVSFGSG ISNLLYLGPSSPLSWRCYVAGSVLAAAHLLYVPWIAPSCHQLLLLSPHSGDDDDHDPDPNALLDGWLSVNAWRSL TVDLGAWIAFVVATAA
Coding	>Ophio5\|2061 ATGGCCACCTCCAGTCTGGGCCTCGACCTCCTCCGCCTCGCGCCCCTGCTCTCCTCCACCTGCTCGCTTCTCTAC GCCTGGGACCAGCACTTCTTCTTGGGCCTCCTCAATCGGCCCGAGATCCGGCTTCGCAGTCGAGCCCTGTTGCCT ACTTACTTCACCCACGTCTTTCGCCGCGGCCTGCCCTTCGTCCTCGCTGCCGTGGCCGTCTCGTTTGGCTCCGGA ATCAGTAACCTCCTCTACCTCGGTCCTTCCTCTCCCCTCTCGTGGCGCTGCTATGTCGCTGGCTCCGTTCTCGCT GCCGCTCACCTCCTTTACGTCCCTTGGATCGCCCCCAGCTGTCATCAACTGCTGCTGCTGTCTCCGCATTCGGGA GACGATGATGACCATGACCCTGATCCCAACGCTTTGCTCGATGGTTGGCTTTCCGTCAATGCTTGGCGTAGCTTG ACCGTCGACTTGGGCGCCTGGATCGCTTTTGTCGTGGCTACGGCGGCC
Transcript	>Ophio5\|2061 ATGGCCACCTCCAGTCTGGGCCTCGACCTCCTCCGCCTCGCGCCCCTGCTCTCCTCCACCTGCTCGCTTCTCTAC GCCTGGGACCAGCACTTCTTCTTGGGCCTCCTCAATCGGCCCGAGATCCGGCTTCGCAGTCGAGCCCTGTTGCCT ACTTACTTCACCCACGTCTTTCGCCGCGGCCTGCCCTTCGTCCTCGCTGCCGTGGCCGTCTCGTTTGGCTCCGGA ATCAGTAACCTCCTCTACCTCGGTCCTTCCTCTCCCCTCTCGTGGCGCTGCTATGTCGCTGGCTCCGTTCTCGCT GCCGCTCACCTCCTTTACGTCCCTTGGATCGCCCCCAGCTGTCATCAACTGCTGCTGCTGTCTCCGCATTCGGGA GACGATGATGACCATGACCCTGATCCCAACGCTTTGCTCGATGGTTGGCTTTCCGTCAATGCTTGGCGTAGCTTG ACCGTCGACTTGGGCGCCTGGATCGCTTTTGTCGTGGCTACGGCGGCCTGA
Gene	>Ophio5\|2061 ATGGCCACCTCCAGTCTGGGCCTCGACCTCCTCCGCCTCGCGCCCCTGCTCTCCTCCACCTGCTCGCTTCTCTAC GCCTGGGACCAGCACTTCTTCTTGGGCCTCCTCAATCGGCCCGAGATCCGGCTTCGCAGTCGAGCCCTGTTGCCT ACTTACTTCACCCACGTCTTTCGCCGCGGCCTGCCCTTCGTCCTCGCTGCCGTGGCCGTCTCGTTTGGCTCCGGA ATCAGTAACCTCCTCTACCTCGGTCCTTCCTCTCCCCTCTCGTGGCGCTGCTATGTCGCTGGCTCCGTTCTCGCT GCCGCTCACCTCCTTTACGTCCCTTGGATCGCCCCCAGCTGTCATCAACTGCTGCTGCTGTCTCCGCATTCGGGA GACGATGATGACCATGACCCTGATCCCAACGCTTTGCTCGATGGTTGGCTTTCCGTCAATGCTTGGCGTAGCTTG ACCGTCGACTTGGGCGCCTGGATCGCTTTTGTCGTGGCTACGGCGGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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