Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|2023
Gene name
Location	scaffold_180:1157..2658
Strand	-
Gene length (bp)	1501
Transcript length (bp)	1197
Coding sequence length (bp)	1194
Protein length (aa)	398

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00293	NUDIX	NUDIX domain	1.8E-08	118	184

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q12524\|PCD1_YEAST	Peroxisomal coenzyme A diphosphatase 1, peroxisomal OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCD1 PE=1 SV=1	92	358	5.0E-27
sp\|Q8GYB1\|NUD15_ARATH	Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana GN=NUDT15 PE=1 SV=2	118	266	1.0E-12
sp\|O22951\|NUD22_ARATH	Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana GN=NUDT22 PE=2 SV=2	118	379	3.0E-11
sp\|Q8LET2\|NUD11_ARATH	Nudix hydrolase 11 OS=Arabidopsis thaliana GN=NUDT11 PE=1 SV=2	118	263	7.0E-11
sp\|Q9NA25\|NDX8_CAEEL	Peroxisomal coenzyme A diphosphatase ndx-8 OS=Caenorhabditis elegans GN=ndx-8 PE=1 SV=1	120	217	9.0E-06

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q12524\|PCD1_YEAST	Peroxisomal coenzyme A diphosphatase 1, peroxisomal OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCD1 PE=1 SV=1	92	358	5.0E-27
sp\|Q8GYB1\|NUD15_ARATH	Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana GN=NUDT15 PE=1 SV=2	118	266	1.0E-12
sp\|O22951\|NUD22_ARATH	Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana GN=NUDT22 PE=2 SV=2	118	379	3.0E-11
sp\|Q8LET2\|NUD11_ARATH	Nudix hydrolase 11 OS=Arabidopsis thaliana GN=NUDT11 PE=1 SV=2	118	263	7.0E-11
sp\|Q9NA25\|NDX8_CAEEL	Peroxisomal coenzyme A diphosphatase ndx-8 OS=Caenorhabditis elegans GN=ndx-8 PE=1 SV=1	120	217	9.0E-06
sp\|Q6D4L1\|NUDL_PECAS	Uncharacterized Nudix hydrolase NudL OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=nudL PE=3 SV=1	97	232	9.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 54	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|2023 MTTTGGSTMPVVTPRQPDDDDDDDDDDIFEGRRQERRGAKQEEEEEEEEQGGEEEEDQELVPAAPLAVAPLQPTA AASLYYDATTMAALNAASAAAISRLRAYRPPPFPLWDTLPSRRRAAVLVLLYADRHGDLRVVVTMRATSLRTFSG HAALPGGKADDEFETPFQIARREAFEEIGLPVDDARLPSPFRIEPLCLLPPSLARTHLVVRPCVAFLHADRSSST EDDDVDDDSLLVEESMIPRLDAREVAALFSAPLYNFLKTEDLPPPPGQSLPPGSWYDGAWTRWKDVPWRVHNFYV PVNNQRVMRPRRRSSTASGGSPRAALDNSLFDDQERFEGRLKVWGMTGRLLVDAARIAYDEAPEMEHNESYGDLD VIMRAAEDGVFQGQEAGDGPAKI
Coding	>Ophio5\|2023 ATGACGACGACTGGTGGGTCGACGATGCCGGTTGTTACGCCTCGGCAGCCAGACGACGACGACGACGACGACGAC GACGACATCTTCGAAGGGAGAAGACAGGAGAGGAGAGGAGCGAAACAAGAGGAAGAGGAAGAAGAAGAAGAACAA GGGGGAGAGGAAGAGGAAGATCAAGAGCTTGTCCCCGCGGCGCCGCTCGCCGTCGCACCTCTCCAACCCACCGCA GCAGCATCGCTCTACTATGACGCCACGACCATGGCCGCCCTCAACGCCGCCTCTGCCGCCGCCATCAGCCGCCTC CGCGCCTACCGTCCGCCCCCCTTCCCATTATGGGACACGCTCCCCTCCCGACGACGAGCGGCCGTCCTCGTCTTG CTATACGCCGATCGTCATGGCGACTTGCGCGTCGTCGTCACCATGCGCGCTACCTCGTTGCGGACCTTCTCCGGT CATGCTGCCCTTCCCGGGGGCAAGGCCGATGACGAGTTTGAGACGCCGTTCCAGATTGCTCGCCGCGAGGCGTTT GAGGAAATTGGCCTTCCCGTCGATGACGCTCGTCTACCGTCGCCCTTTCGTATCGAGCCACTCTGTTTGCTCCCC CCTTCTCTCGCCCGAACGCATCTCGTCGTCCGGCCCTGCGTCGCCTTCCTGCACGCCGATCGCTCCTCATCTACC GAAGACGACGATGTCGACGATGATTCCCTCCTCGTCGAAGAGTCCATGATCCCGCGCCTCGATGCTCGCGAGGTG GCCGCCCTCTTCAGCGCTCCGCTCTACAACTTCCTCAAGACCGAGGATCTACCTCCGCCTCCGGGCCAGTCCCTC CCCCCCGGCTCCTGGTACGACGGCGCGTGGACTCGCTGGAAGGACGTGCCGTGGCGCGTTCACAACTTTTACGTG CCTGTCAACAACCAGCGCGTCATGAGGCCCCGACGCCGCAGCAGTACCGCGAGCGGTGGGAGCCCCCGCGCCGCG CTAGATAATTCCCTCTTTGATGATCAAGAGCGCTTCGAGGGAAGGCTCAAGGTCTGGGGCATGACGGGCCGGTTG CTCGTCGACGCGGCTCGCATCGCTTACGACGAGGCGCCTGAGATGGAGCACAATGAGTCGTATGGCGACCTCGAC GTCATTATGCGCGCCGCCGAGGATGGCGTCTTTCAGGGGCAGGAAGCGGGCGATGGACCGGCCAAGATA
Transcript	>Ophio5\|2023 ATGACGACGACTGGTGGGTCGACGATGCCGGTTGTTACGCCTCGGCAGCCAGACGACGACGACGACGACGACGAC GACGACATCTTCGAAGGGAGAAGACAGGAGAGGAGAGGAGCGAAACAAGAGGAAGAGGAAGAAGAAGAAGAACAA GGGGGAGAGGAAGAGGAAGATCAAGAGCTTGTCCCCGCGGCGCCGCTCGCCGTCGCACCTCTCCAACCCACCGCA GCAGCATCGCTCTACTATGACGCCACGACCATGGCCGCCCTCAACGCCGCCTCTGCCGCCGCCATCAGCCGCCTC CGCGCCTACCGTCCGCCCCCCTTCCCATTATGGGACACGCTCCCCTCCCGACGACGAGCGGCCGTCCTCGTCTTG CTATACGCCGATCGTCATGGCGACTTGCGCGTCGTCGTCACCATGCGCGCTACCTCGTTGCGGACCTTCTCCGGT CATGCTGCCCTTCCCGGGGGCAAGGCCGATGACGAGTTTGAGACGCCGTTCCAGATTGCTCGCCGCGAGGCGTTT GAGGAAATTGGCCTTCCCGTCGATGACGCTCGTCTACCGTCGCCCTTTCGTATCGAGCCACTCTGTTTGCTCCCC CCTTCTCTCGCCCGAACGCATCTCGTCGTCCGGCCCTGCGTCGCCTTCCTGCACGCCGATCGCTCCTCATCTACC GAAGACGACGATGTCGACGATGATTCCCTCCTCGTCGAAGAGTCCATGATCCCGCGCCTCGATGCTCGCGAGGTG GCCGCCCTCTTCAGCGCTCCGCTCTACAACTTCCTCAAGACCGAGGATCTACCTCCGCCTCCGGGCCAGTCCCTC CCCCCCGGCTCCTGGTACGACGGCGCGTGGACTCGCTGGAAGGACGTGCCGTGGCGCGTTCACAACTTTTACGTG CCTGTCAACAACCAGCGCGTCATGAGGCCCCGACGCCGCAGCAGTACCGCGAGCGGTGGGAGCCCCCGCGCCGCG CTAGATAATTCCCTCTTTGATGATCAAGAGCGCTTCGAGGGAAGGCTCAAGGTCTGGGGCATGACGGGCCGGTTG CTCGTCGACGCGGCTCGCATCGCTTACGACGAGGCGCCTGAGATGGAGCACAATGAGTCGTATGGCGACCTCGAC GTCATTATGCGCGCCGCCGAGGATGGCGTCTTTCAGGGGCAGGAAGCGGGCGATGGACCGGCCAAGATATGA
Gene	>Ophio5\|2023 ATGACGACGACTGGTGGGTCGACGATGCCGGTTGTTACGCCTCGGCAGCCAGACGACGACGACGACGACGACGAC GACGACATCTTCGAAGGGAGAAGACAGGAGAGGAGAGGAGCGAAACAAGAGGAAGAGGAAGAAGAAGAAGAACAA GGGGGAGAGGAAGAGGAAGATCAAGAGCTTGTCCCCGCGGCGCCGCTCGCCGTCGCACCTCTCCAACCCACCGCA GCAGCATCGCTCTACTATGACGCCACGACCATGGCCGCCCTCAACGCCGCCTCTGCCGTACGCCTCGCCTCTCTC TTTCTCTCTCCCCCCCCTCCCTCTTTTACCTCCTCTCTCTCCCTCCCTTTACCCGCTTGACAACTCCAACGCAGA GGGGTACATACTTACCTCCATCTCTACATACCTACCTACCTACCTACCCATGTGTGTATGTGTGTATGTGTGTAT ACAACATGATTTCAGGCCGCCATCAGCCGCCTCCGCGCCTACCGTCCGCCCCCCTTCCCATTATGGGACACGCTC CCCTCCCGACGACGAGCGGCCGTCCTCGTCTTGCTATACGCCGATCGTCATGGCGACTTGCGCGTCGTCGTCACC ATGCGCGCTACCTCGTTGCGGACCTTCTCCGGTCATGCTGCCCTTCCCGGGGGCAAGGCCGATGACGAGTTTGAG ACGCCGTGTACGCTTCTTCCCTACTTGTTATGCCCCCTTTCCTCCTTCCCCCCCCTTTTTCTATGGCTGGAATTG ACGCGGCATGGTGGGCGGGAGGGTGGTTGGGAAACGGCGCGGGGAAAATACAGTCCAGATTGCTCGCCGCGAGGC GTTTGAGGAAATTGGCCTTCCCGTCGATGACGCTCGTCTACCGTCGCCCTTTCGTATCGAGCCACTCTGTTTGCT CCCCCCTTCTCTCGCCCGAACGCATCTCGTCGTCCGGCCCTGCGTCGCCTTCCTGCACGCCGATCGCTCCTCATC TACCGAAGACGACGATGTCGACGATGATTCCCTCCTCGTCGAAGAGTCCATGATCCCGCGCCTCGATGCTCGCGA GGTGGCCGCCCTCTTCAGCGCTCCGCTCTACAACTTCCTCAAGACCGAGGATCTACCTCCGCCTCCGGGCCAGTC CCTCCCCCCCGGCTCCTGGTACGACGGCGCGTGGACTCGCTGGAAGGACGTGCCGTGGCGCGTTCACAACTTTTA CGTGCCTGTCAACAACCAGCGCGTCATGAGGCCCCGACGCCGCAGCAGTACCGCGAGCGGTGGGAGCCCCCGCGC CGCGCTAGATAATTCCCTCTTTGATGATCAAGAGCGCTTCGAGGGAAGGCTCAAGGTCTGGGGCATGACGGGCCG GTTGCTCGTCGACGCGGCTCGCATCGCTTACGACGAGGCGCCTGAGATGGAGCACAATGAGTCGTATGGCGACCT CGACGTCATTATGCGCGCCGCCGAGGATGGCGTCTTTCAGGGGCAGGAAGCGGGCGATGGACCGGCCAAGATATG A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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