Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1997
Gene name
Locationscaffold_18:11050..12018
Strand-
Gene length (bp)968
Transcript length (bp)765
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02666 PS_Dcarbxylase Phosphatidylserine decarboxylase 7.4E-37 40 233

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14111|PSD3_SCHPO Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=3 SV=2 40 243 1.0E-18
sp|Q8RGF2|PSD_FUSNN Phosphatidylserine decarboxylase proenzyme OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=psd PE=3 SV=1 17 242 6.0E-17
sp|A4GNA8|PSD3_ARATH Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana GN=PSD3 PE=1 SV=1 40 224 2.0E-15
sp|F4KAK5|PSD2_ARATH Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=PSD2 PE=2 SV=1 40 224 8.0E-14
sp|P53037|PSD2_YEAST Phosphatidylserine decarboxylase proenzyme 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSD2 PE=1 SV=1 40 233 9.0E-13
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14111|PSD3_SCHPO Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=psd3 PE=3 SV=2 40 243 1.0E-18
sp|Q8RGF2|PSD_FUSNN Phosphatidylserine decarboxylase proenzyme OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=psd PE=3 SV=1 17 242 6.0E-17
sp|A4GNA8|PSD3_ARATH Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana GN=PSD3 PE=1 SV=1 40 224 2.0E-15
sp|F4KAK5|PSD2_ARATH Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=PSD2 PE=2 SV=1 40 224 8.0E-14
sp|P53037|PSD2_YEAST Phosphatidylserine decarboxylase proenzyme 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PSD2 PE=1 SV=1 40 233 9.0E-13
sp|C0Z4E2|PSD_BREBN Phosphatidylserine decarboxylase proenzyme OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=psd PE=3 SV=1 37 234 4.0E-12
sp|Q5JN42|PSD2_ORYSJ Phosphatidylserine decarboxylase proenzyme 2 OS=Oryza sativa subsp. japonica GN=PSD2 PE=3 SV=2 40 233 5.0E-11
sp|A8MJ83|PSD_ALKOO Phosphatidylserine decarboxylase proenzyme OS=Alkaliphilus oremlandii (strain OhILAs) GN=psd PE=3 SV=1 40 224 8.0E-11
sp|B8I6U9|PSD_CLOCE Phosphatidylserine decarboxylase proenzyme OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=psd PE=3 SV=1 40 233 1.0E-10
sp|Q899T7|PSD_CLOTE Phosphatidylserine decarboxylase proenzyme OS=Clostridium tetani (strain Massachusetts / E88) GN=psd PE=3 SV=1 40 238 1.0E-10
sp|Q83AQ4|PSD_COXBU Phosphatidylserine decarboxylase proenzyme OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=psd PE=3 SV=1 39 236 2.0E-10
sp|A9NAS0|PSD_COXBR Phosphatidylserine decarboxylase proenzyme OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=psd PE=3 SV=1 39 236 2.0E-10
sp|B6J316|PSD_COXB2 Phosphatidylserine decarboxylase proenzyme OS=Coxiella burnetii (strain CbuG_Q212) GN=psd PE=3 SV=1 39 236 2.0E-10
sp|B6J9C5|PSD_COXB1 Phosphatidylserine decarboxylase proenzyme OS=Coxiella burnetii (strain CbuK_Q154) GN=psd PE=3 SV=1 39 236 2.0E-10
sp|A9KEZ8|PSD_COXBN Phosphatidylserine decarboxylase proenzyme OS=Coxiella burnetii (strain Dugway 5J108-111) GN=psd PE=3 SV=1 39 236 7.0E-10
sp|B0BAF4|PSD_CHLTB Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) GN=psd PE=3 SV=1 40 235 1.0E-09
sp|B0B8S5|PSD_CHLT2 Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) GN=psd PE=3 SV=1 40 235 1.0E-09
sp|Q3KKZ5|PSD_CHLTA Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13) GN=psd PE=3 SV=1 40 235 1.0E-09
sp|P0CD79|PSD_CHLTR Phosphatidylserine decarboxylase proenzyme OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=psd PE=3 SV=1 40 235 1.0E-09
sp|Q821L3|PSD_CHLCV Phosphatidylserine decarboxylase proenzyme OS=Chlamydophila caviae (strain GPIC) GN=psd PE=3 SV=1 40 233 5.0E-09
sp|Q5L4W1|PSD_CHLAB Phosphatidylserine decarboxylase proenzyme OS=Chlamydophila abortus (strain DSM 27085 / S26/3) GN=psd PE=3 SV=1 40 233 5.0E-09
sp|A5N497|PSD_CLOK5 Phosphatidylserine decarboxylase proenzyme OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=psd PE=3 SV=1 40 238 6.0E-09
sp|B9DXW5|PSD_CLOK1 Phosphatidylserine decarboxylase proenzyme OS=Clostridium kluyveri (strain NBRC 12016) GN=psd PE=3 SV=1 40 238 6.0E-09
sp|C5D4W6|PSD_GEOSW Phosphatidylserine decarboxylase proenzyme OS=Geobacillus sp. (strain WCH70) GN=psd PE=3 SV=1 43 233 1.0E-08
sp|Q9PLM7|PSD_CHLMU Phosphatidylserine decarboxylase proenzyme OS=Chlamydia muridarum (strain MoPn / Nigg) GN=psd PE=3 SV=1 40 224 2.0E-08
sp|B0VP52|PSD_ACIBS Phosphatidylserine decarboxylase proenzyme OS=Acinetobacter baumannii (strain SDF) GN=psd PE=3 SV=1 40 236 2.0E-08
sp|A7MZ50|PSD_VIBCB Phosphatidylserine decarboxylase proenzyme OS=Vibrio campbellii (strain ATCC BAA-1116 / BB120) GN=psd PE=3 SV=1 40 237 2.0E-08
sp|A1WV88|PSD_HALHL Phosphatidylserine decarboxylase proenzyme OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=psd PE=3 SV=1 43 217 3.0E-08
sp|B2I1N9|PSD_ACIBC Phosphatidylserine decarboxylase proenzyme OS=Acinetobacter baumannii (strain ACICU) GN=psd PE=3 SV=1 40 236 3.0E-08
sp|B7I242|PSD_ACIB5 Phosphatidylserine decarboxylase proenzyme OS=Acinetobacter baumannii (strain AB0057) GN=psd PE=3 SV=1 40 236 3.0E-08
sp|B7GUX2|PSD_ACIB3 Phosphatidylserine decarboxylase proenzyme OS=Acinetobacter baumannii (strain AB307-0294) GN=psd PE=3 SV=1 40 236 3.0E-08
sp|B0V9W1|PSD_ACIBY Phosphatidylserine decarboxylase proenzyme OS=Acinetobacter baumannii (strain AYE) GN=psd PE=3 SV=1 40 236 3.0E-08
sp|A3MA23|PSD_ACIBT Phosphatidylserine decarboxylase proenzyme OS=Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) GN=psd PE=3 SV=2 40 246 4.0E-08
sp|Q256C9|PSD_CHLFF Phosphatidylserine decarboxylase proenzyme OS=Chlamydophila felis (strain Fe/C-56) GN=psd PE=3 SV=1 40 233 6.0E-08
sp|Q0TV39|PSD_CLOP1 Phosphatidylserine decarboxylase proenzyme OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) GN=psd PE=3 SV=1 40 224 9.0E-08
sp|Q0SWT6|PSD_CLOPS Phosphatidylserine decarboxylase proenzyme OS=Clostridium perfringens (strain SM101 / Type A) GN=psd PE=3 SV=1 8 224 1.0E-07
sp|Q7P0H6|PSD_CHRVO Phosphatidylserine decarboxylase proenzyme OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=psd PE=3 SV=1 32 134 2.0E-07
sp|B7GKA2|PSD_ANOFW Phosphatidylserine decarboxylase proenzyme OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=psd PE=3 SV=1 43 227 2.0E-07
sp|Q8XPD5|PSD_CLOPE Phosphatidylserine decarboxylase proenzyme OS=Clostridium perfringens (strain 13 / Type A) GN=psd PE=3 SV=1 40 224 2.0E-07
sp|Q87KZ9|PSD_VIBPA Phosphatidylserine decarboxylase proenzyme OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=psd PE=3 SV=1 40 234 2.0E-07
sp|A8H8H5|PSD_SHEPA Phosphatidylserine decarboxylase proenzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=psd PE=3 SV=1 26 236 3.0E-07
sp|Q46192|PSD_CLOPA Phosphatidylserine decarboxylase proenzyme OS=Clostridium pasteurianum GN=psd PE=3 SV=1 40 233 4.0E-07
sp|A1SZV9|PSD_PSYIN Phosphatidylserine decarboxylase proenzyme OS=Psychromonas ingrahamii (strain 37) GN=psd PE=3 SV=1 40 235 5.0E-07
sp|A3QAD1|PSD_SHELP Phosphatidylserine decarboxylase proenzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=psd PE=3 SV=1 40 236 5.0E-07
sp|A1U4D6|PSD_MARHV Phosphatidylserine decarboxylase proenzyme OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) GN=psd PE=3 SV=1 39 247 5.0E-07
sp|B0TU73|PSD_SHEHH Phosphatidylserine decarboxylase proenzyme OS=Shewanella halifaxensis (strain HAW-EB4) GN=psd PE=3 SV=1 31 223 6.0E-07
sp|A0Q3R9|PSD_CLONN Phosphatidylserine decarboxylase proenzyme OS=Clostridium novyi (strain NT) GN=psd PE=3 SV=1 40 242 8.0E-07
sp|C1FPI8|PSD_CLOBJ Phosphatidylserine decarboxylase proenzyme OS=Clostridium botulinum (strain Kyoto / Type A2) GN=psd PE=3 SV=1 40 233 9.0E-07
sp|Q7MGZ5|PSD_VIBVY Phosphatidylserine decarboxylase proenzyme OS=Vibrio vulnificus (strain YJ016) GN=psd PE=3 SV=1 40 233 1.0E-06
sp|Q8DCV8|PSD_VIBVU Phosphatidylserine decarboxylase proenzyme OS=Vibrio vulnificus (strain CMCP6) GN=psd PE=3 SV=1 40 233 1.0E-06
sp|A0KSQ8|PSD_SHESA Phosphatidylserine decarboxylase proenzyme OS=Shewanella sp. (strain ANA-3) GN=psd PE=3 SV=1 40 223 1.0E-06
sp|Q0HMP8|PSD_SHESM Phosphatidylserine decarboxylase proenzyme OS=Shewanella sp. (strain MR-4) GN=psd PE=3 SV=1 40 234 1.0E-06
sp|Q5KWX3|PSD_GEOKA Phosphatidylserine decarboxylase proenzyme OS=Geobacillus kaustophilus (strain HTA426) GN=psd PE=3 SV=1 43 225 1.0E-06
sp|Q0HR33|PSD_SHESR Phosphatidylserine decarboxylase proenzyme OS=Shewanella sp. (strain MR-7) GN=psd PE=3 SV=1 40 223 1.0E-06
sp|Q6F6W3|PSD_ACIAD Phosphatidylserine decarboxylase proenzyme OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=psd PE=3 SV=1 40 232 2.0E-06
sp|Q6D035|PSD_PECAS Phosphatidylserine decarboxylase proenzyme OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=psd PE=3 SV=1 40 233 3.0E-06
sp|Q8PJ17|PSD_XANAC Phosphatidylserine decarboxylase proenzyme OS=Xanthomonas axonopodis pv. citri (strain 306) GN=psd PE=3 SV=1 39 134 3.0E-06
sp|Q21H90|PSD_SACD2 Phosphatidylserine decarboxylase proenzyme OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=psd PE=3 SV=1 40 236 4.0E-06
sp|A7GT32|PSD_BACCN Phosphatidylserine decarboxylase proenzyme OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) GN=psd PE=3 SV=1 43 225 6.0E-06
sp|A1SA30|PSD_SHEAM Phosphatidylserine decarboxylase proenzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=psd PE=3 SV=1 40 223 7.0E-06
sp|B1KHV8|PSD_SHEWM Phosphatidylserine decarboxylase proenzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=psd PE=3 SV=1 33 223 1.0E-05
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GO

GO Term Description Terminal node
GO:0004609 phosphatidylserine decarboxylase activity Yes
GO:0008654 phospholipid biosynthetic process Yes
GO:0003674 molecular_function No
GO:0044255 cellular lipid metabolic process No
GO:0008150 biological_process No
GO:0006796 phosphate-containing compound metabolic process No
GO:0044238 primary metabolic process No
GO:0016831 carboxy-lyase activity No
GO:0006644 phospholipid metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0008152 metabolic process No
GO:0044237 cellular metabolic process No
GO:0009058 biosynthetic process No
GO:0006793 phosphorus metabolic process No
GO:0071704 organic substance metabolic process No
GO:0009987 cellular process No
GO:0016830 carbon-carbon lyase activity No
GO:0006629 lipid metabolic process No
GO:0019637 organophosphate metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0016829 lyase activity No
GO:0003824 catalytic activity No
GO:0090407 organophosphate biosynthetic process No
GO:0044249 cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1997
MSHWLVNFAEKIGNFHDRPEPGRPISGSSLAAAGSRLISFSPRRLKPGSRPVAEADNPKVIVSPADSTFDEWADI
KDGKVTFQDGTDEVKLKGIFLENDGVFIHAFLSTKDYHREHTVVAGKVLEVKNIQKQVYLEAFAPAKPWPQTISS
RDHSRLTAQDTNGVRREALIVIDAGPVGLVAFLPIGMAQVSSVVMTATVGSTLAKGEDVSYFQFGGSDIVVVFQN
KVQFEKNIEGKRNKFESFDVVINKVQMLF
Coding >Ophio5|1997
ATGTCTCACTGGCTCGTCAACTTCGCCGAGAAGATTGGAAACTTTCACGATCGCCCGGAACCGGGGAGGCCCATC
TCTGGCTCGAGCCTCGCGGCGGCTGGAAGTCGTCTCATCAGTTTTTCCCCCCGTCGTCTAAAGCCCGGCTCTCGG
CCCGTCGCCGAGGCGGATAACCCAAAAGTCATCGTCTCGCCTGCCGACTCTACCTTTGACGAGTGGGCCGATATC
AAGGATGGAAAGGTGACGTTCCAGGACGGCACAGACGAGGTCAAACTCAAGGGCATTTTCCTGGAAAACGACGGC
GTCTTCATCCACGCTTTTCTCTCCACCAAGGACTACCATCGAGAGCATACGGTCGTGGCTGGCAAGGTTCTAGAA
GTGAAGAACATCCAGAAACAGGTTTACCTCGAAGCCTTTGCCCCTGCCAAGCCATGGCCGCAGACGATCTCCTCG
AGAGATCATTCCCGCCTAACCGCGCAGGATACCAATGGTGTCAGACGCGAGGCCTTAATCGTCATCGATGCAGGA
CCAGTTGGCCTCGTTGCTTTCTTGCCTATTGGCATGGCGCAGGTCTCGTCTGTCGTTATGACGGCTACGGTGGGC
TCGACCTTGGCCAAGGGAGAAGATGTATCATATTTTCAGTTTGGCGGGTCCGACATTGTCGTCGTCTTCCAGAAC
AAGGTTCAATTCGAGAAGAATATTGAGGGAAAGCGTAACAAATTTGAGTCATTTGACGTTGTTATCAACAAGGTT
CAGATGCTGTTT
Transcript >Ophio5|1997
ATGTCTCACTGGCTCGTCAACTTCGCCGAGAAGATTGGAAACTTTCACGATCGCCCGGAACCGGGGAGGCCCATC
TCTGGCTCGAGCCTCGCGGCGGCTGGAAGTCGTCTCATCAGTTTTTCCCCCCGTCGTCTAAAGCCCGGCTCTCGG
CCCGTCGCCGAGGCGGATAACCCAAAAGTCATCGTCTCGCCTGCCGACTCTACCTTTGACGAGTGGGCCGATATC
AAGGATGGAAAGGTGACGTTCCAGGACGGCACAGACGAGGTCAAACTCAAGGGCATTTTCCTGGAAAACGACGGC
GTCTTCATCCACGCTTTTCTCTCCACCAAGGACTACCATCGAGAGCATACGGTCGTGGCTGGCAAGGTTCTAGAA
GTGAAGAACATCCAGAAACAGGTTTACCTCGAAGCCTTTGCCCCTGCCAAGCCATGGCCGCAGACGATCTCCTCG
AGAGATCATTCCCGCCTAACCGCGCAGGATACCAATGGTGTCAGACGCGAGGCCTTAATCGTCATCGATGCAGGA
CCAGTTGGCCTCGTTGCTTTCTTGCCTATTGGCATGGCGCAGGTCTCGTCTGTCGTTATGACGGCTACGGTGGGC
TCGACCTTGGCCAAGGGAGAAGATGTATCATATTTTCAGTTTGGCGGGTCCGACATTGTCGTCGTCTTCCAGAAC
AAGGTTCAATTCGAGAAGAATATTGAGGGAAAGCGTAACAAATTTGAGTCATTTGACGTTGTTATCAACAAGGTT
CAGATGCTGTTTTGA
Gene >Ophio5|1997
ATGTCTCACTGGCTCGTCAACTTCGCCGAGAAGATTGGAAACTTTCACGATCGCCCGGAGTCCCATCACGGCGGA
AACTTTAAACACGTTTCACAATAACCCTCTGTAGACCGGGGAGGCCCATCTCTGGCTCGAGCCTCGCGGCGGCTG
GAAGTCGTCTCATCAGTTTTTCCCCCCGTCGTCTAAAGCCCGGCTCTCGGCCCGTCGCCGAGGCGGATAACCCAA
AAGTCATCGTCTCGCCTGCCGACTCTACCTTTGACGAGTGGGCCGATATCAAGGATGGAAAGGTGACGTTCCAGG
ACGGCACAGACGAGGTCAAACTCAAGGGCATTTTCCTGGAAAAGTCAGCCATCTTTTGCTTGACGGCGAGTACAA
CGACTCGTTTAGCGACGGCGTCTTCATCCACGCTTTTCTCTCCACCAAGGACTACCATCGAGAGCATACGGTCGT
GGCTGGCAAGGTTCTAGAAGTGAAGAACATCCAGAAACAGGTTTACCTCGAAGTCAACGCGTCGCCCAACAGGAA
AGATGGCGGACTAGTGCCAATCAGGCCTTTGCCCCTGCCAAGCCATGGCCGCAGACGATCTCCTCGAGAGATCAT
TCCCGCCTAACCGCGCAGGATACCAATGGTGTCAGACGCGAGGCCTTAATCGTCATCGATGCAGGACCAGTTGGC
CTCGTTGCTTTCTTGCCTATTGGCATGGCGCAGGTCTCGTCTGTCGTTATGACGGCTACGGTGGGCTCGACCTTG
GCCAAGGGAGAAGATGTATCATATTTTCAGTTTGGCGGGTCCGACATTGTCGTCGTCTTCCAGAACAAGGTTCAA
TTCGAGAAGAATATTGAGGGAAAGCGTAACAAAGTGGGCGAGAAGATTGCTATCTTTTATTTAAGTTGCTTGTGG
TTTTTAGCTTCAAGCGGTAGTTTGAGTCATTTGACGTTGTTATCAACAAGGTTCAGATGCTGTTTTGA

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