Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1991
Gene name
Locationscaffold_179:33441..34038
Strand-
Gene length (bp)597
Transcript length (bp)537
Coding sequence length (bp)534
Protein length (aa) 178

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 55 77 22
2 103 125 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1991
MMPKGTARSHLMTEEGAILIMATQFAKCRLSGFPFCWAELSLLEALAGRDGLGWAAWLEAFLLLARVVVVVVVVV
AAGSRRLARLSFFSCPWLAAVFFRLRKVNHVSVVVVIIVEIIFLADIMSLTRRTTAALMLRRESMCLIRDTALKL
DILEYATSLATAPSLMSTRADMPTQCPR
Coding >Ophio5|1991
ATGATGCCAAAAGGCACGGCTCGAAGCCATTTGATGACGGAAGAGGGCGCAATCTTGATCATGGCAACGCAGTTC
GCGAAATGCCGCTTGTCGGGATTCCCTTTCTGCTGGGCAGAGCTTTCTTTGCTCGAGGCACTCGCCGGCCGAGAC
GGCCTTGGCTGGGCAGCATGGCTCGAGGCATTTTTGCTCCTGGCACGAGTCGTCGTCGTCGTCGTCGTTGTCGTC
GCCGCTGGTAGCCGCCGACTTGCACGACTCTCCTTCTTTTCCTGTCCATGGTTGGCGGCAGTCTTCTTCCGGCTT
CGGAAAGTCAATCACGTCTCCGTCGTCGTCGTCATCATCGTAGAGATCATCTTCCTCGCCGATATCATGTCCCTC
ACTCGTCGTACAACCGCCGCTCTGATGCTCCGCCGAGAGAGCATGTGTCTGATACGCGACACAGCTCTCAAACTC
GACATTCTCGAGTACGCAACCAGCCTTGCAACAGCGCCATCTCTGATGTCCACACGCGCCGATATGCCGACTCAG
TGCCCACGT
Transcript >Ophio5|1991
ATGATGCCAAAAGGCACGGCTCGAAGCCATTTGATGACGGAAGAGGGCGCAATCTTGATCATGGCAACGCAGTTC
GCGAAATGCCGCTTGTCGGGATTCCCTTTCTGCTGGGCAGAGCTTTCTTTGCTCGAGGCACTCGCCGGCCGAGAC
GGCCTTGGCTGGGCAGCATGGCTCGAGGCATTTTTGCTCCTGGCACGAGTCGTCGTCGTCGTCGTCGTTGTCGTC
GCCGCTGGTAGCCGCCGACTTGCACGACTCTCCTTCTTTTCCTGTCCATGGTTGGCGGCAGTCTTCTTCCGGCTT
CGGAAAGTCAATCACGTCTCCGTCGTCGTCGTCATCATCGTAGAGATCATCTTCCTCGCCGATATCATGTCCCTC
ACTCGTCGTACAACCGCCGCTCTGATGCTCCGCCGAGAGAGCATGTGTCTGATACGCGACACAGCTCTCAAACTC
GACATTCTCGAGTACGCAACCAGCCTTGCAACAGCGCCATCTCTGATGTCCACACGCGCCGATATGCCGACTCAG
TGCCCACGTTGA
Gene >Ophio5|1991
ATGATGCCAAAAGGCACGGCTCGAAGCCATTTGATGACGGAAGAGGGCGCAATCTTGATCATGGCAACGCAGTTC
GCGAAATGCCGCTTGTCGGGATTCCCTTTCTGCTGGGCAGAGCTTTCTTTGCTCGAGGCACTCGCCGGCCGAGAC
GGCCTTGGTGTGTCCGAGGCTGTGGATATGTCTTTCGAAATGTCTTCCCGTCCATGACTTCGTAAAGGCTGGGCA
GCATGGCTCGAGGCATTTTTGCTCCTGGCACGAGTCGTCGTCGTCGTCGTCGTTGTCGTCGCCGCTGGTAGCCGC
CGACTTGCACGACTCTCCTTCTTTTCCTGTCCATGGTTGGCGGCAGTCTTCTTCCGGCTTCGGAAAGTCAATCAC
GTCTCCGTCGTCGTCGTCATCATCGTAGAGATCATCTTCCTCGCCGATATCATGTCCCTCACTCGTCGTACAACC
GCCGCTCTGATGCTCCGCCGAGAGAGCATGTGTCTGATACGCGACACAGCTCTCAAACTCGACATTCTCGAGTAC
GCAACCAGCCTTGCAACAGCGCCATCTCTGATGTCCACACGCGCCGATATGCCGACTCAGTGCCCACGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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