Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1979
Gene name
Locationscaffold_179:7071..8832
Strand-
Gene length (bp)1761
Transcript length (bp)1704
Coding sequence length (bp)1701
Protein length (aa) 567

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16199 Radical_SAM_C Radical_SAM C-terminal domain 3.4E-33 327 406
PF04055 Radical_SAM Radical SAM superfamily 3.7E-17 121 309
PF00583 Acetyltransf_1 Acetyltransferase (GNAT) family 3.3E-08 448 551

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14023|ELP3_SCHPO Probable elongator complex protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=elp3 PE=3 SV=1 25 562 0.0E+00
sp|Q60LW7|ELP3_CAEBR Probable elongator complex protein 3 OS=Caenorhabditis briggsae GN=elpc-3 PE=3 SV=1 29 563 0.0E+00
sp|Q23651|ELP3_CAEEL Probable elongator complex protein 3 OS=Caenorhabditis elegans GN=elpc-3 PE=3 SV=2 29 563 0.0E+00
sp|Q93ZR1|ELP3_ARATH Elongator complex protein 3 OS=Arabidopsis thaliana GN=HAG3 PE=1 SV=1 19 562 0.0E+00
sp|Q1ZXC6|ELP3_DICDI Probable elongator complex protein 3 OS=Dictyostelium discoideum GN=elp3 PE=3 SV=1 17 562 0.0E+00
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Swissprot ID Swissprot Description Start End E-value
sp|O14023|ELP3_SCHPO Probable elongator complex protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=elp3 PE=3 SV=1 25 562 0.0E+00
sp|Q60LW7|ELP3_CAEBR Probable elongator complex protein 3 OS=Caenorhabditis briggsae GN=elpc-3 PE=3 SV=1 29 563 0.0E+00
sp|Q23651|ELP3_CAEEL Probable elongator complex protein 3 OS=Caenorhabditis elegans GN=elpc-3 PE=3 SV=2 29 563 0.0E+00
sp|Q93ZR1|ELP3_ARATH Elongator complex protein 3 OS=Arabidopsis thaliana GN=HAG3 PE=1 SV=1 19 562 0.0E+00
sp|Q1ZXC6|ELP3_DICDI Probable elongator complex protein 3 OS=Dictyostelium discoideum GN=elp3 PE=3 SV=1 17 562 0.0E+00
sp|Q7X7L3|ELP3_ORYSJ Elongator complex protein 3 OS=Oryza sativa subsp. japonica GN=ELP3 PE=2 SV=2 13 562 0.0E+00
sp|Q2KJ61|ELP3_BOVIN Elongator complex protein 3 OS=Bos taurus GN=ELP3 PE=2 SV=2 11 563 0.0E+00
sp|Q9CZX0|ELP3_MOUSE Elongator complex protein 3 OS=Mus musculus GN=Elp3 PE=1 SV=1 11 562 0.0E+00
sp|Q9H9T3|ELP3_HUMAN Elongator complex protein 3 OS=Homo sapiens GN=ELP3 PE=1 SV=2 11 562 0.0E+00
sp|Q9VQZ6|ELP3_DROME Probable elongator complex protein 3 OS=Drosophila melanogaster GN=Elp3 PE=2 SV=1 15 564 0.0E+00
sp|Q6NVL5|ELP3_XENTR Elongator complex protein 3 OS=Xenopus tropicalis GN=elp3 PE=2 SV=1 11 563 0.0E+00
sp|Q5ZHS1|ELP3_CHICK Elongator complex protein 3 OS=Gallus gallus GN=ELP3 PE=2 SV=1 20 562 0.0E+00
sp|Q5RIC0|ELP3_DANRE Elongator complex protein 3 OS=Danio rerio GN=elp3 PE=2 SV=3 20 562 0.0E+00
sp|Q5HZM6|ELP3_XENLA Elongator complex protein 3 OS=Xenopus laevis GN=elp3 PE=2 SV=1 15 563 0.0E+00
sp|Q02908|ELP3_YEAST Elongator complex protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELP3 PE=1 SV=1 16 560 0.0E+00
sp|Q58536|Y1136_METJA Uncharacterized protein MJ1136 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1136 PE=3 SV=1 16 563 4.0E-145
sp|Q57910|Y486_METJA Uncharacterized protein MJ0486 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0486 PE=3 SV=1 113 382 1.0E-14
sp|P0ADW6|YHCC_ECOLI Protein YhcC OS=Escherichia coli (strain K12) GN=yhcC PE=3 SV=1 197 386 1.0E-11
sp|P0ADW7|YHCC_ECO57 Uncharacterized protein YhcC OS=Escherichia coli O157:H7 GN=yhcC PE=3 SV=1 197 386 1.0E-11
sp|O35008|YTQA_BACSU Uncharacterized protein YtqA OS=Bacillus subtilis (strain 168) GN=ytqA PE=3 SV=1 230 388 2.0E-10
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GO

GO Term Description Terminal node
GO:0008080 N-acetyltransferase activity Yes
GO:0051536 iron-sulfur cluster binding Yes
GO:0003824 catalytic activity Yes
GO:0051540 metal cluster binding No
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups No
GO:0005488 binding No
GO:0016746 acyltransferase activity No
GO:0016740 transferase activity No
GO:0016410 N-acyltransferase activity No
GO:0003674 molecular_function No
GO:0016407 acetyltransferase activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.6539 0.5803 0.021 0.077 0.5516 0.1619 0.0614 0.2245 0.0869 0.0417

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 35.83 19.28 52.37
CcL In ants, during behavior modification 37.45 19.75 55.15
CcD In ants, recently dead 37.97 20.51 55.42

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.874046 no
SC16a CcD 0.833135 no
CcL CcD 0.962973 no

Orthologs

Orthofinder run ID4
Orthogroup1707
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1469
Ophiocordyceps australis map64 (Brazil) OphauB2|6208
Ophiocordyceps camponoti-floridani Ophcf2|03393
Ophiocordyceps camponoti-rufipedis Ophun1|1260
Ophiocordyceps kimflemingae Ophio5|1979 (this protein)
Ophiocordyceps subramaniannii Hirsu2|1504

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1979
MATAMTLTAAQAPSGIARESERFLRCCADVANALIEDHEATKDGRPSRDINLNALRARLAKKHKLANIPPLTAII
AAIPEHYKKYILPRLVAKPIRTSSGIAVVAVMCKPHRCPHIAYTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMR
AIRARYDPFEQARGRVDQLKALGHSVDKVEYIIMGGTFMSLPETYRQEFIAQLHNALSGYQTSKVDEAVEASEMS
NIKCVGITIETRPDYCLQPHLSDMLTYGCTRLEVGVQSLYEDVARDTNRGHTVAAVAETFCLAKDAGFKVVSHMM
PDLPNVGMERDMDQFREYFENPSFRTDGLKIYPTLVIRGTGLYELWRTGRYQNYTPNELVDLVARILALVPPWTR
IYRIQRDIPMPLVSSGVENGNLRELALARMKDFGTTCRDVRTREVGINEVKNKIRPNQIELVRRDYVANGGWETF
LAYEDPKQDILVALLRLRKCTEKYSYREEIVGQASSMIRELHVYGTAVPIHARDPRKFQHQGFGTLLMEEAERIA
REEHGSRKMSVISGVGVRSYYRKLGYWLDGPYMSKWLDERVG
Coding >Ophio5|1979
ATGGCCACGGCCATGACGCTCACCGCAGCACAGGCCCCCTCTGGCATCGCCCGCGAGAGCGAGCGCTTCTTACGA
TGCTGCGCCGACGTCGCAAACGCCCTCATCGAGGACCACGAGGCCACCAAGGACGGGCGCCCCTCTCGTGACATC
AACCTCAACGCCCTACGCGCCAGGCTCGCTAAGAAGCACAAGCTGGCCAATATTCCTCCCCTGACGGCCATCATC
GCCGCAATCCCCGAGCACTACAAAAAGTACATCCTGCCTCGGCTTGTCGCCAAGCCCATCCGCACCTCGTCTGGC
ATTGCTGTCGTCGCCGTCATGTGCAAACCCCATCGATGTCCTCACATCGCTTACACCGGCAACATCTGCGTCTAT
TGCCCCGGCGGCCCGGACTCCGACTTTGAATACAGCACACAATCCTACACCGGCTACGAGCCTACGTCTATGCGA
GCCATCCGCGCGCGCTACGACCCCTTTGAGCAGGCTCGGGGTCGCGTCGACCAGCTCAAGGCGCTCGGTCACTCG
GTAGACAAGGTCGAGTACATCATCATGGGCGGCACCTTCATGTCGCTGCCCGAGACGTATCGTCAAGAGTTCATT
GCCCAGTTGCACAACGCCCTGAGCGGGTACCAGACCTCCAAGGTTGACGAGGCTGTCGAGGCGAGTGAGATGAGC
AACATCAAGTGCGTTGGAATCACCATTGAGACGCGGCCCGATTACTGCCTGCAGCCACACCTCTCAGACATGCTC
ACATACGGCTGCACGAGACTAGAGGTCGGTGTGCAGTCGCTCTACGAGGACGTGGCGCGGGACACGAACCGCGGG
CACACAGTCGCGGCCGTCGCCGAGACCTTTTGTCTGGCCAAGGACGCCGGCTTCAAGGTCGTCAGCCACATGATG
CCTGATCTGCCAAACGTCGGCATGGAGCGGGACATGGACCAGTTCCGAGAGTATTTCGAGAACCCGTCCTTCAGG
ACAGACGGCCTAAAGATCTATCCGACGCTTGTCATCCGCGGCACGGGCCTATACGAGCTGTGGCGGACAGGACGC
TATCAAAACTACACGCCCAACGAGCTCGTCGACCTCGTGGCCAGGATCCTGGCCCTGGTGCCGCCTTGGACGCGG
ATCTACCGCATTCAGCGAGACATTCCGATGCCTCTCGTATCTTCGGGCGTCGAGAACGGCAACTTGCGCGAGCTC
GCCCTGGCCCGAATGAAGGATTTCGGCACGACGTGTCGAGACGTGCGGACGAGAGAAGTGGGCATCAACGAGGTC
AAGAATAAGATCAGACCGAACCAGATTGAGCTGGTGCGCCGGGACTACGTCGCCAACGGTGGCTGGGAGACCTTT
CTCGCATACGAGGACCCCAAGCAGGATATACTCGTCGCCCTGCTGCGGCTGCGAAAGTGTACGGAAAAGTACAGC
TATCGAGAGGAGATTGTCGGCCAGGCCAGCAGCATGATCCGCGAGCTGCACGTATACGGCACGGCGGTGCCCATC
CACGCGCGCGATCCCCGCAAGTTTCAGCACCAGGGCTTCGGCACGCTGCTGATGGAGGAGGCGGAGAGGATCGCG
CGCGAGGAGCATGGCAGTCGAAAGATGAGCGTCATCTCCGGCGTGGGCGTGCGGAGCTATTACAGGAAGCTCGGC
TATTGGCTCGATGGGCCATACATGAGCAAGTGGCTCGACGAGCGAGTCGGG
Transcript >Ophio5|1979
ATGGCCACGGCCATGACGCTCACCGCAGCACAGGCCCCCTCTGGCATCGCCCGCGAGAGCGAGCGCTTCTTACGA
TGCTGCGCCGACGTCGCAAACGCCCTCATCGAGGACCACGAGGCCACCAAGGACGGGCGCCCCTCTCGTGACATC
AACCTCAACGCCCTACGCGCCAGGCTCGCTAAGAAGCACAAGCTGGCCAATATTCCTCCCCTGACGGCCATCATC
GCCGCAATCCCCGAGCACTACAAAAAGTACATCCTGCCTCGGCTTGTCGCCAAGCCCATCCGCACCTCGTCTGGC
ATTGCTGTCGTCGCCGTCATGTGCAAACCCCATCGATGTCCTCACATCGCTTACACCGGCAACATCTGCGTCTAT
TGCCCCGGCGGCCCGGACTCCGACTTTGAATACAGCACACAATCCTACACCGGCTACGAGCCTACGTCTATGCGA
GCCATCCGCGCGCGCTACGACCCCTTTGAGCAGGCTCGGGGTCGCGTCGACCAGCTCAAGGCGCTCGGTCACTCG
GTAGACAAGGTCGAGTACATCATCATGGGCGGCACCTTCATGTCGCTGCCCGAGACGTATCGTCAAGAGTTCATT
GCCCAGTTGCACAACGCCCTGAGCGGGTACCAGACCTCCAAGGTTGACGAGGCTGTCGAGGCGAGTGAGATGAGC
AACATCAAGTGCGTTGGAATCACCATTGAGACGCGGCCCGATTACTGCCTGCAGCCACACCTCTCAGACATGCTC
ACATACGGCTGCACGAGACTAGAGGTCGGTGTGCAGTCGCTCTACGAGGACGTGGCGCGGGACACGAACCGCGGG
CACACAGTCGCGGCCGTCGCCGAGACCTTTTGTCTGGCCAAGGACGCCGGCTTCAAGGTCGTCAGCCACATGATG
CCTGATCTGCCAAACGTCGGCATGGAGCGGGACATGGACCAGTTCCGAGAGTATTTCGAGAACCCGTCCTTCAGG
ACAGACGGCCTAAAGATCTATCCGACGCTTGTCATCCGCGGCACGGGCCTATACGAGCTGTGGCGGACAGGACGC
TATCAAAACTACACGCCCAACGAGCTCGTCGACCTCGTGGCCAGGATCCTGGCCCTGGTGCCGCCTTGGACGCGG
ATCTACCGCATTCAGCGAGACATTCCGATGCCTCTCGTATCTTCGGGCGTCGAGAACGGCAACTTGCGCGAGCTC
GCCCTGGCCCGAATGAAGGATTTCGGCACGACGTGTCGAGACGTGCGGACGAGAGAAGTGGGCATCAACGAGGTC
AAGAATAAGATCAGACCGAACCAGATTGAGCTGGTGCGCCGGGACTACGTCGCCAACGGTGGCTGGGAGACCTTT
CTCGCATACGAGGACCCCAAGCAGGATATACTCGTCGCCCTGCTGCGGCTGCGAAAGTGTACGGAAAAGTACAGC
TATCGAGAGGAGATTGTCGGCCAGGCCAGCAGCATGATCCGCGAGCTGCACGTATACGGCACGGCGGTGCCCATC
CACGCGCGCGATCCCCGCAAGTTTCAGCACCAGGGCTTCGGCACGCTGCTGATGGAGGAGGCGGAGAGGATCGCG
CGCGAGGAGCATGGCAGTCGAAAGATGAGCGTCATCTCCGGCGTGGGCGTGCGGAGCTATTACAGGAAGCTCGGC
TATTGGCTCGATGGGCCATACATGAGCAAGTGGCTCGACGAGCGAGTCGGGTAG
Gene >Ophio5|1979
ATGGCCACGGCCATGACGCTCACCGCAGCACAGGCCCCCTCTGGCATCGCCCGCGAGAGCGAGCGCTTCTTACGA
TGCTGCGCCGACGTCGCAAACGCCCTCATCGAGGACCACGAGGCCACCAAGGACGGGCGCCCCTCTCGTGACATC
AACCTCAACGCCCTACGCGCCAGGCTCGCTAAGAAGCACAAGCTGGCCAATATTCCTCCCCTGACGGCCATCATC
GCCGCAATCCCCGAGCACTACAAAAAGTACATCCTGCCTCGGCTTGTCGCCAAGCCCATCCGTAAGGCTCTTTGT
TGTTTCTCTCGGCTTGCCTTGTCCCTGGGCTGACCCGCGGCAGGCACCTCGTCTGGCATTGCTGTCGTCGCCGTC
ATGTGCAAACCCCATCGATGTCCTCACATCGCTTACACCGGCAACATCTGCGTCTATTGCCCCGGCGGCCCGGAC
TCCGACTTTGAATACAGCACACAATCCTACACCGGCTACGAGCCTACGTCTATGCGAGCCATCCGCGCGCGCTAC
GACCCCTTTGAGCAGGCTCGGGGTCGCGTCGACCAGCTCAAGGCGCTCGGTCACTCGGTAGACAAGGTCGAGTAC
ATCATCATGGGCGGCACCTTCATGTCGCTGCCCGAGACGTATCGTCAAGAGTTCATTGCCCAGTTGCACAACGCC
CTGAGCGGGTACCAGACCTCCAAGGTTGACGAGGCTGTCGAGGCGAGTGAGATGAGCAACATCAAGTGCGTTGGA
ATCACCATTGAGACGCGGCCCGATTACTGCCTGCAGCCACACCTCTCAGACATGCTCACATACGGCTGCACGAGA
CTAGAGGTCGGTGTGCAGTCGCTCTACGAGGACGTGGCGCGGGACACGAACCGCGGGCACACAGTCGCGGCCGTC
GCCGAGACCTTTTGTCTGGCCAAGGACGCCGGCTTCAAGGTCGTCAGCCACATGATGCCTGATCTGCCAAACGTC
GGCATGGAGCGGGACATGGACCAGTTCCGAGAGTATTTCGAGAACCCGTCCTTCAGGACAGACGGCCTAAAGATC
TATCCGACGCTTGTCATCCGCGGCACGGGCCTATACGAGCTGTGGCGGACAGGACGCTATCAAAACTACACGCCC
AACGAGCTCGTCGACCTCGTGGCCAGGATCCTGGCCCTGGTGCCGCCTTGGACGCGGATCTACCGCATTCAGCGA
GACATTCCGATGCCTCTCGTATCTTCGGGCGTCGAGAACGGCAACTTGCGCGAGCTCGCCCTGGCCCGAATGAAG
GATTTCGGCACGACGTGTCGAGACGTGCGGACGAGAGAAGTGGGCATCAACGAGGTCAAGAATAAGATCAGACCG
AACCAGATTGAGCTGGTGCGCCGGGACTACGTCGCCAACGGTGGCTGGGAGACCTTTCTCGCATACGAGGACCCC
AAGCAGGATATACTCGTCGCCCTGCTGCGGCTGCGAAAGTGTACGGAAAAGTACAGCTATCGAGAGGAGATTGTC
GGCCAGGCCAGCAGCATGATCCGCGAGCTGCACGTATACGGCACGGCGGTGCCCATCCACGCGCGCGATCCCCGC
AAGTTTCAGCACCAGGGCTTCGGCACGCTGCTGATGGAGGAGGCGGAGAGGATCGCGCGCGAGGAGCATGGCAGT
CGAAAGATGAGCGTCATCTCCGGCGTGGGCGTGCGGAGCTATTACAGGAAGCTCGGCTATTGGCTCGATGGGCCA
TACATGAGCAAGTGGCTCGACGAGCGAGTCGGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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