Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1978
Gene name
Locationscaffold_179:4845..6726
Strand+
Gene length (bp)1881
Transcript length (bp)1881
Coding sequence length (bp)1878
Protein length (aa) 626

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1978
MLTRNVLLVFVGLMAALLQCAYAQDNGGEKGQVEVGGEDNSPKGGDDNSLGRPEEDGDKQEDGTPDKTGGDDDNK
PEEDETKPDEEQTDEKAVDEIIADVCQPAGDIKLGDKSIKAPCSVQPVIEFVCEGLGNFINTDDGSARERGDQDM
EMYTTCLLGNGSSYKQDVKGCISCQESNGFFSQEQATMAREVFDQAIEELSNNPDEIQTISEIVEKLVEGRETPP
APTERPEKPVELNEYYKDQPEVQDHGNLDRLIEEIDADDQPGNSTSTEGAVVSPTDGAAPVRTDQAGASSSLGTQ
EAPSATGAPGQPRAGAEGQPQASAAGQPAGRRSLSKRTLTRRGLQRRQQFQNMLQATFTCSKPPPFRGCFRPVQM
PPPPPREQRQQAPKPPTETKLAVPTTLIRTTSAARAEVKASATSAVSRPVATSQVGQANFMMAFVFVSWRQVMQC
KGNNVYTYSPVFAQPVPVQDSPVTPQKPLAPQQQKRLPNLNKCQKCVKEAVPIQEVTKAPIPAVTTKGDEVCKEV
IQSVDNNGSNDLQMMILIALIPQAPAQPQVCNQCIAGGAPTVVEIPQSRQPAVVVPGAGSRAPVAAQPNTPPPNS
QVTRPNSQPNTQPKANIQPPPARICQ
Coding >Ophio5|1978
ATGTTGACGAGAAACGTGCTGTTGGTCTTCGTCGGCCTCATGGCCGCCTTGCTCCAATGCGCCTACGCGCAGGAC
AATGGCGGAGAAAAGGGCCAAGTCGAGGTCGGGGGTGAAGACAACTCGCCCAAAGGCGGAGACGACAATAGCCTG
GGAAGGCCGGAAGAAGATGGAGACAAGCAAGAGGATGGCACGCCAGACAAGACGGGAGGTGATGATGACAACAAG
CCAGAAGAAGACGAAACGAAGCCGGACGAGGAGCAAACGGATGAAAAGGCCGTGGATGAAATCATTGCCGACGTC
TGCCAACCGGCCGGCGACATCAAGCTTGGAGACAAGTCAATCAAGGCACCATGCAGCGTCCAGCCCGTCATCGAG
TTCGTCTGCGAAGGACTCGGCAACTTCATCAACACGGACGACGGCAGCGCCAGGGAACGAGGCGACCAGGACATG
GAAATGTACACGACATGCCTCTTGGGCAACGGCAGTTCCTACAAGCAAGATGTCAAGGGCTGCATCAGCTGCCAA
GAGAGCAACGGATTCTTCTCTCAGGAACAGGCTACGATGGCGAGGGAGGTGTTTGACCAAGCCATCGAGGAGCTC
TCCAACAACCCAGACGAGATTCAGACCATCTCGGAGATTGTCGAGAAGTTGGTAGAGGGTCGCGAAACCCCACCG
GCTCCTACGGAGAGGCCGGAGAAGCCGGTTGAGCTGAACGAGTACTACAAGGATCAGCCCGAGGTGCAGGACCAC
GGCAACCTCGATCGGCTCATCGAGGAAATCGATGCCGACGACCAGCCCGGAAACAGCACGTCCACCGAAGGCGCC
GTCGTAAGCCCAACAGACGGAGCGGCGCCCGTTCGGACAGATCAAGCCGGAGCGTCGTCGAGTCTCGGGACGCAG
GAAGCGCCGTCAGCCACCGGCGCCCCGGGACAGCCTCGGGCCGGTGCCGAGGGACAGCCTCAAGCCAGTGCCGCG
GGACAGCCGGCCGGTCGTCGAAGCCTGAGCAAGAGGACGCTGACGAGGCGCGGACTCCAACGCAGACAACAGTTC
CAAAACATGCTACAGGCCACCTTCACCTGCTCCAAGCCCCCCCCTTTCCGCGGCTGCTTCCGGCCGGTGCAAATG
CCGCCTCCGCCGCCGAGGGAACAACGCCAACAGGCTCCCAAGCCCCCGACCGAGACCAAGTTGGCGGTACCGACG
ACGCTGATCCGGACCACGTCGGCCGCCAGAGCCGAGGTCAAGGCGTCGGCGACCTCGGCCGTCAGCCGACCCGTT
GCCACCTCGCAGGTCGGCCAGGCTAACTTCATGATGGCATTTGTCTTCGTTTCCTGGCGACAGGTGATGCAGTGC
AAGGGGAACAACGTCTACACCTACAGTCCCGTCTTCGCACAGCCCGTCCCCGTTCAAGACTCGCCTGTGACGCCT
CAGAAGCCCCTGGCGCCACAGCAGCAAAAGAGGCTTCCGAACCTCAACAAGTGCCAGAAGTGCGTCAAGGAGGCC
GTTCCTATTCAAGAGGTCACCAAGGCGCCCATCCCGGCCGTCACCACCAAGGGCGACGAGGTTTGCAAGGAGGTC
ATTCAGAGCGTCGACAACAATGGTTCCAACGATTTGCAGATGATGATTCTCATTGCCCTGATCCCCCAGGCACCC
GCTCAGCCTCAGGTCTGCAACCAGTGCATTGCCGGAGGCGCCCCTACCGTCGTCGAAATTCCGCAGAGCCGCCAG
CCCGCTGTCGTTGTTCCGGGCGCCGGCTCGCGCGCCCCGGTTGCCGCACAGCCAAACACGCCGCCACCGAACTCG
CAGGTAACGCGGCCAAATTCGCAGCCCAACACGCAGCCCAAGGCCAATATCCAGCCGCCACCCGCACGGATTTGC
CAA
Transcript >Ophio5|1978
ATGTTGACGAGAAACGTGCTGTTGGTCTTCGTCGGCCTCATGGCCGCCTTGCTCCAATGCGCCTACGCGCAGGAC
AATGGCGGAGAAAAGGGCCAAGTCGAGGTCGGGGGTGAAGACAACTCGCCCAAAGGCGGAGACGACAATAGCCTG
GGAAGGCCGGAAGAAGATGGAGACAAGCAAGAGGATGGCACGCCAGACAAGACGGGAGGTGATGATGACAACAAG
CCAGAAGAAGACGAAACGAAGCCGGACGAGGAGCAAACGGATGAAAAGGCCGTGGATGAAATCATTGCCGACGTC
TGCCAACCGGCCGGCGACATCAAGCTTGGAGACAAGTCAATCAAGGCACCATGCAGCGTCCAGCCCGTCATCGAG
TTCGTCTGCGAAGGACTCGGCAACTTCATCAACACGGACGACGGCAGCGCCAGGGAACGAGGCGACCAGGACATG
GAAATGTACACGACATGCCTCTTGGGCAACGGCAGTTCCTACAAGCAAGATGTCAAGGGCTGCATCAGCTGCCAA
GAGAGCAACGGATTCTTCTCTCAGGAACAGGCTACGATGGCGAGGGAGGTGTTTGACCAAGCCATCGAGGAGCTC
TCCAACAACCCAGACGAGATTCAGACCATCTCGGAGATTGTCGAGAAGTTGGTAGAGGGTCGCGAAACCCCACCG
GCTCCTACGGAGAGGCCGGAGAAGCCGGTTGAGCTGAACGAGTACTACAAGGATCAGCCCGAGGTGCAGGACCAC
GGCAACCTCGATCGGCTCATCGAGGAAATCGATGCCGACGACCAGCCCGGAAACAGCACGTCCACCGAAGGCGCC
GTCGTAAGCCCAACAGACGGAGCGGCGCCCGTTCGGACAGATCAAGCCGGAGCGTCGTCGAGTCTCGGGACGCAG
GAAGCGCCGTCAGCCACCGGCGCCCCGGGACAGCCTCGGGCCGGTGCCGAGGGACAGCCTCAAGCCAGTGCCGCG
GGACAGCCGGCCGGTCGTCGAAGCCTGAGCAAGAGGACGCTGACGAGGCGCGGACTCCAACGCAGACAACAGTTC
CAAAACATGCTACAGGCCACCTTCACCTGCTCCAAGCCCCCCCCTTTCCGCGGCTGCTTCCGGCCGGTGCAAATG
CCGCCTCCGCCGCCGAGGGAACAACGCCAACAGGCTCCCAAGCCCCCGACCGAGACCAAGTTGGCGGTACCGACG
ACGCTGATCCGGACCACGTCGGCCGCCAGAGCCGAGGTCAAGGCGTCGGCGACCTCGGCCGTCAGCCGACCCGTT
GCCACCTCGCAGGTCGGCCAGGCTAACTTCATGATGGCATTTGTCTTCGTTTCCTGGCGACAGGTGATGCAGTGC
AAGGGGAACAACGTCTACACCTACAGTCCCGTCTTCGCACAGCCCGTCCCCGTTCAAGACTCGCCTGTGACGCCT
CAGAAGCCCCTGGCGCCACAGCAGCAAAAGAGGCTTCCGAACCTCAACAAGTGCCAGAAGTGCGTCAAGGAGGCC
GTTCCTATTCAAGAGGTCACCAAGGCGCCCATCCCGGCCGTCACCACCAAGGGCGACGAGGTTTGCAAGGAGGTC
ATTCAGAGCGTCGACAACAATGGTTCCAACGATTTGCAGATGATGATTCTCATTGCCCTGATCCCCCAGGCACCC
GCTCAGCCTCAGGTCTGCAACCAGTGCATTGCCGGAGGCGCCCCTACCGTCGTCGAAATTCCGCAGAGCCGCCAG
CCCGCTGTCGTTGTTCCGGGCGCCGGCTCGCGCGCCCCGGTTGCCGCACAGCCAAACACGCCGCCACCGAACTCG
CAGGTAACGCGGCCAAATTCGCAGCCCAACACGCAGCCCAAGGCCAATATCCAGCCGCCACCCGCACGGATTTGC
CAATAA
Gene >Ophio5|1978
ATGTTGACGAGAAACGTGCTGTTGGTCTTCGTCGGCCTCATGGCCGCCTTGCTCCAATGCGCCTACGCGCAGGAC
AATGGCGGAGAAAAGGGCCAAGTCGAGGTCGGGGGTGAAGACAACTCGCCCAAAGGCGGAGACGACAATAGCCTG
GGAAGGCCGGAAGAAGATGGAGACAAGCAAGAGGATGGCACGCCAGACAAGACGGGAGGTGATGATGACAACAAG
CCAGAAGAAGACGAAACGAAGCCGGACGAGGAGCAAACGGATGAAAAGGCCGTGGATGAAATCATTGCCGACGTC
TGCCAACCGGCCGGCGACATCAAGCTTGGAGACAAGTCAATCAAGGCACCATGCAGCGTCCAGCCCGTCATCGAG
TTCGTCTGCGAAGGACTCGGCAACTTCATCAACACGGACGACGGCAGCGCCAGGGAACGAGGCGACCAGGACATG
GAAATGTACACGACATGCCTCTTGGGCAACGGCAGTTCCTACAAGCAAGATGTCAAGGGCTGCATCAGCTGCCAA
GAGAGCAACGGATTCTTCTCTCAGGAACAGGCTACGATGGCGAGGGAGGTGTTTGACCAAGCCATCGAGGAGCTC
TCCAACAACCCAGACGAGATTCAGACCATCTCGGAGATTGTCGAGAAGTTGGTAGAGGGTCGCGAAACCCCACCG
GCTCCTACGGAGAGGCCGGAGAAGCCGGTTGAGCTGAACGAGTACTACAAGGATCAGCCCGAGGTGCAGGACCAC
GGCAACCTCGATCGGCTCATCGAGGAAATCGATGCCGACGACCAGCCCGGAAACAGCACGTCCACCGAAGGCGCC
GTCGTAAGCCCAACAGACGGAGCGGCGCCCGTTCGGACAGATCAAGCCGGAGCGTCGTCGAGTCTCGGGACGCAG
GAAGCGCCGTCAGCCACCGGCGCCCCGGGACAGCCTCGGGCCGGTGCCGAGGGACAGCCTCAAGCCAGTGCCGCG
GGACAGCCGGCCGGTCGTCGAAGCCTGAGCAAGAGGACGCTGACGAGGCGCGGACTCCAACGCAGACAACAGTTC
CAAAACATGCTACAGGCCACCTTCACCTGCTCCAAGCCCCCCCCTTTCCGCGGCTGCTTCCGGCCGGTGCAAATG
CCGCCTCCGCCGCCGAGGGAACAACGCCAACAGGCTCCCAAGCCCCCGACCGAGACCAAGTTGGCGGTACCGACG
ACGCTGATCCGGACCACGTCGGCCGCCAGAGCCGAGGTCAAGGCGTCGGCGACCTCGGCCGTCAGCCGACCCGTT
GCCACCTCGCAGGTCGGCCAGGCTAACTTCATGATGGCATTTGTCTTCGTTTCCTGGCGACAGGTGATGCAGTGC
AAGGGGAACAACGTCTACACCTACAGTCCCGTCTTCGCACAGCCCGTCCCCGTTCAAGACTCGCCTGTGACGCCT
CAGAAGCCCCTGGCGCCACAGCAGCAAAAGAGGCTTCCGAACCTCAACAAGTGCCAGAAGTGCGTCAAGGAGGCC
GTTCCTATTCAAGAGGTCACCAAGGCGCCCATCCCGGCCGTCACCACCAAGGGCGACGAGGTTTGCAAGGAGGTC
ATTCAGAGCGTCGACAACAATGGTTCCAACGATTTGCAGATGATGATTCTCATTGCCCTGATCCCCCAGGCACCC
GCTCAGCCTCAGGTCTGCAACCAGTGCATTGCCGGAGGCGCCCCTACCGTCGTCGAAATTCCGCAGAGCCGCCAG
CCCGCTGTCGTTGTTCCGGGCGCCGGCTCGCGCGCCCCGGTTGCCGCACAGCCAAACACGCCGCCACCGAACTCG
CAGGTAACGCGGCCAAATTCGCAGCCCAACACGCAGCCCAAGGCCAATATCCAGCCGCCACCCGCACGGATTTGC
CAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail