Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1977
Gene name
Locationscaffold_179:472..1762
Strand-
Gene length (bp)1290
Transcript length (bp)1290
Coding sequence length (bp)1287
Protein length (aa) 429

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00153 Mito_carr Mitochondrial carrier protein 1.4E-06 160 249

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1977
MSHEPSPQPNSSEETIPGRAPRSNAATAASAAGVRAVSAQLVAFYFRAPAKAFFRTRVDYLAFARSLQDASRVAE
LKPSSSSSSSSWAATLRLWMRNSTAGVLTSVIRHQGWSVVPRQILPPLAANVSVGAVLYASYIHVLARLHPESAR
ASKRTYPPPPPTSTFAAGFLAGGLQSVVAAPLDALQARYHHRHLLVPGDAGRPRSLWAFGAEKLREIGLRGILAG
WTLSFTKDSLGSAVFFTTFEYVKAQAYYRFVTWYYGGLPTDMVDTLALKRPHGPPQQQDTKVIRPHYAIEPMFLL
LAGASASFAQQLLLHPLTHFQLSHWDRLQDLDAEAVRYRQSDKKPPRRWRMLRAYYRAYRDTWANCIAEAATHGQ
RPHRWLYRGFFSAAVRQVPSTSAGLIIFELVRRKYGFGTEEVRITKDGYDILLT
Coding >Ophio5|1977
ATGAGCCATGAGCCGAGCCCACAGCCGAACTCCTCGGAAGAAACCATCCCGGGCCGCGCCCCTCGAAGTAACGCG
GCCACGGCCGCCTCTGCTGCCGGCGTCCGCGCCGTGAGCGCCCAGCTGGTAGCCTTTTACTTTCGCGCCCCAGCA
AAGGCCTTCTTCCGCACACGCGTCGACTATCTGGCCTTTGCCCGCTCCCTTCAGGACGCGAGTCGCGTCGCAGAG
CTGAAGCCATCGTCGTCGTCGTCGTCCTCGTCATGGGCTGCCACTTTGCGTCTCTGGATGCGCAACTCGACGGCT
GGCGTCTTGACATCCGTCATTCGTCATCAGGGTTGGTCGGTCGTGCCGCGTCAGATCTTGCCGCCTCTGGCAGCC
AATGTTAGTGTCGGGGCTGTGCTATACGCCAGTTACATTCATGTCCTTGCTCGGCTGCACCCTGAGAGTGCGAGG
GCTAGCAAGAGGACGTATCCGCCGCCGCCGCCGACTTCGACTTTTGCTGCTGGCTTTTTGGCTGGTGGGCTGCAG
AGCGTCGTAGCGGCGCCACTCGATGCCCTGCAGGCGCGTTACCATCATCGTCATCTGCTTGTCCCCGGTGACGCA
GGTCGACCGCGTAGCCTCTGGGCCTTTGGAGCCGAGAAGCTTCGCGAGATCGGCCTGCGTGGTATCTTGGCTGGT
TGGACCCTCTCGTTTACCAAGGATAGTCTCGGCAGCGCCGTCTTCTTTACCACCTTTGAGTACGTCAAGGCTCAG
GCCTACTACCGCTTCGTCACCTGGTATTACGGCGGTTTGCCCACGGACATGGTCGACACGCTCGCCCTCAAGCGT
CCTCATGGTCCTCCCCAACAACAAGATACGAAGGTGATACGCCCCCATTACGCCATTGAGCCCATGTTTCTTCTC
CTCGCCGGCGCCAGCGCCTCCTTCGCCCAACAGCTCCTCCTCCACCCCTTGACGCACTTCCAACTCAGCCACTGG
GACCGGCTCCAAGACCTCGACGCCGAAGCGGTCCGATATCGACAGTCGGACAAGAAGCCGCCGCGTCGGTGGAGG
ATGCTGCGCGCCTACTATCGCGCCTACAGGGACACGTGGGCCAACTGCATCGCCGAAGCCGCGACCCATGGCCAG
CGCCCGCACCGTTGGCTGTATCGCGGCTTCTTCTCCGCTGCTGTTCGTCAGGTGCCCAGCACGAGCGCGGGTTTG
ATCATCTTTGAGCTCGTCAGGCGCAAGTACGGGTTTGGCACCGAGGAGGTTCGCATCACCAAGGATGGATATGAT
ATTCTGCTCACT
Transcript >Ophio5|1977
ATGAGCCATGAGCCGAGCCCACAGCCGAACTCCTCGGAAGAAACCATCCCGGGCCGCGCCCCTCGAAGTAACGCG
GCCACGGCCGCCTCTGCTGCCGGCGTCCGCGCCGTGAGCGCCCAGCTGGTAGCCTTTTACTTTCGCGCCCCAGCA
AAGGCCTTCTTCCGCACACGCGTCGACTATCTGGCCTTTGCCCGCTCCCTTCAGGACGCGAGTCGCGTCGCAGAG
CTGAAGCCATCGTCGTCGTCGTCGTCCTCGTCATGGGCTGCCACTTTGCGTCTCTGGATGCGCAACTCGACGGCT
GGCGTCTTGACATCCGTCATTCGTCATCAGGGTTGGTCGGTCGTGCCGCGTCAGATCTTGCCGCCTCTGGCAGCC
AATGTTAGTGTCGGGGCTGTGCTATACGCCAGTTACATTCATGTCCTTGCTCGGCTGCACCCTGAGAGTGCGAGG
GCTAGCAAGAGGACGTATCCGCCGCCGCCGCCGACTTCGACTTTTGCTGCTGGCTTTTTGGCTGGTGGGCTGCAG
AGCGTCGTAGCGGCGCCACTCGATGCCCTGCAGGCGCGTTACCATCATCGTCATCTGCTTGTCCCCGGTGACGCA
GGTCGACCGCGTAGCCTCTGGGCCTTTGGAGCCGAGAAGCTTCGCGAGATCGGCCTGCGTGGTATCTTGGCTGGT
TGGACCCTCTCGTTTACCAAGGATAGTCTCGGCAGCGCCGTCTTCTTTACCACCTTTGAGTACGTCAAGGCTCAG
GCCTACTACCGCTTCGTCACCTGGTATTACGGCGGTTTGCCCACGGACATGGTCGACACGCTCGCCCTCAAGCGT
CCTCATGGTCCTCCCCAACAACAAGATACGAAGGTGATACGCCCCCATTACGCCATTGAGCCCATGTTTCTTCTC
CTCGCCGGCGCCAGCGCCTCCTTCGCCCAACAGCTCCTCCTCCACCCCTTGACGCACTTCCAACTCAGCCACTGG
GACCGGCTCCAAGACCTCGACGCCGAAGCGGTCCGATATCGACAGTCGGACAAGAAGCCGCCGCGTCGGTGGAGG
ATGCTGCGCGCCTACTATCGCGCCTACAGGGACACGTGGGCCAACTGCATCGCCGAAGCCGCGACCCATGGCCAG
CGCCCGCACCGTTGGCTGTATCGCGGCTTCTTCTCCGCTGCTGTTCGTCAGGTGCCCAGCACGAGCGCGGGTTTG
ATCATCTTTGAGCTCGTCAGGCGCAAGTACGGGTTTGGCACCGAGGAGGTTCGCATCACCAAGGATGGATATGAT
ATTCTGCTCACTTGA
Gene >Ophio5|1977
ATGAGCCATGAGCCGAGCCCACAGCCGAACTCCTCGGAAGAAACCATCCCGGGCCGCGCCCCTCGAAGTAACGCG
GCCACGGCCGCCTCTGCTGCCGGCGTCCGCGCCGTGAGCGCCCAGCTGGTAGCCTTTTACTTTCGCGCCCCAGCA
AAGGCCTTCTTCCGCACACGCGTCGACTATCTGGCCTTTGCCCGCTCCCTTCAGGACGCGAGTCGCGTCGCAGAG
CTGAAGCCATCGTCGTCGTCGTCGTCCTCGTCATGGGCTGCCACTTTGCGTCTCTGGATGCGCAACTCGACGGCT
GGCGTCTTGACATCCGTCATTCGTCATCAGGGTTGGTCGGTCGTGCCGCGTCAGATCTTGCCGCCTCTGGCAGCC
AATGTTAGTGTCGGGGCTGTGCTATACGCCAGTTACATTCATGTCCTTGCTCGGCTGCACCCTGAGAGTGCGAGG
GCTAGCAAGAGGACGTATCCGCCGCCGCCGCCGACTTCGACTTTTGCTGCTGGCTTTTTGGCTGGTGGGCTGCAG
AGCGTCGTAGCGGCGCCACTCGATGCCCTGCAGGCGCGTTACCATCATCGTCATCTGCTTGTCCCCGGTGACGCA
GGTCGACCGCGTAGCCTCTGGGCCTTTGGAGCCGAGAAGCTTCGCGAGATCGGCCTGCGTGGTATCTTGGCTGGT
TGGACCCTCTCGTTTACCAAGGATAGTCTCGGCAGCGCCGTCTTCTTTACCACCTTTGAGTACGTCAAGGCTCAG
GCCTACTACCGCTTCGTCACCTGGTATTACGGCGGTTTGCCCACGGACATGGTCGACACGCTCGCCCTCAAGCGT
CCTCATGGTCCTCCCCAACAACAAGATACGAAGGTGATACGCCCCCATTACGCCATTGAGCCCATGTTTCTTCTC
CTCGCCGGCGCCAGCGCCTCCTTCGCCCAACAGCTCCTCCTCCACCCCTTGACGCACTTCCAACTCAGCCACTGG
GACCGGCTCCAAGACCTCGACGCCGAAGCGGTCCGATATCGACAGTCGGACAAGAAGCCGCCGCGTCGGTGGAGG
ATGCTGCGCGCCTACTATCGCGCCTACAGGGACACGTGGGCCAACTGCATCGCCGAAGCCGCGACCCATGGCCAG
CGCCCGCACCGTTGGCTGTATCGCGGCTTCTTCTCCGCTGCTGTTCGTCAGGTGCCCAGCACGAGCGCGGGTTTG
ATCATCTTTGAGCTCGTCAGGCGCAAGTACGGGTTTGGCACCGAGGAGGTTCGCATCACCAAGGATGGATATGAT
ATTCTGCTCACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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