© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1973 |
| Gene name | |
| Location | scaffold_178:22950..23692 |
| Strand | - |
| Gene length (bp) | 742 |
| Transcript length (bp) | 549 |
| Coding sequence length (bp) | 546 |
| Protein length (aa) | 182 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08534 | Redoxin | Redoxin | 2.7E-24 | 30 | 181 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14313|PMP20_SCHPO | Putative peroxiredoxin pmp20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp20 PE=2 SV=2 | 28 | 181 | 5.0E-32 |
| sp|P30044|PRDX5_HUMAN | Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=4 | 18 | 181 | 2.0E-26 |
| sp|Q9GLW7|PRDX5_CHLAE | Peroxiredoxin-5, mitochondrial OS=Chlorocebus aethiops GN=PRDX5 PE=2 SV=1 | 18 | 181 | 6.0E-26 |
| sp|P99029|PRDX5_MOUSE | Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=Prdx5 PE=1 SV=2 | 17 | 181 | 9.0E-26 |
| sp|Q9GLW9|PRDX5_PAPHA | Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1 | 18 | 181 | 1.0E-25 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14313|PMP20_SCHPO | Putative peroxiredoxin pmp20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp20 PE=2 SV=2 | 28 | 181 | 5.0E-32 |
| sp|P30044|PRDX5_HUMAN | Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=4 | 18 | 181 | 2.0E-26 |
| sp|Q9GLW7|PRDX5_CHLAE | Peroxiredoxin-5, mitochondrial OS=Chlorocebus aethiops GN=PRDX5 PE=2 SV=1 | 18 | 181 | 6.0E-26 |
| sp|P99029|PRDX5_MOUSE | Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=Prdx5 PE=1 SV=2 | 17 | 181 | 9.0E-26 |
| sp|Q9GLW9|PRDX5_PAPHA | Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1 | 18 | 181 | 1.0E-25 |
| sp|Q9R063|PRDX5_RAT | Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus GN=Prdx5 PE=1 SV=1 | 17 | 181 | 1.0E-23 |
| sp|Q9FR35|PRX2C_ORYSJ | Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1 | 26 | 182 | 3.0E-23 |
| sp|Q9XEX2|PRX2B_ARATH | Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1 | 26 | 173 | 1.0E-20 |
| sp|Q9BGI1|PRDX5_BOVIN | Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2 | 18 | 181 | 2.0E-20 |
| sp|O22711|PRX2D_ARATH | Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2 | 26 | 166 | 6.0E-20 |
| sp|Q9SRZ4|PRX2C_ARATH | Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1 | 26 | 173 | 1.0E-19 |
| sp|Q9SDD6|PRX2F_ORYSJ | Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1 | 51 | 182 | 2.0E-19 |
| sp|Q9M7T0|PRX2F_ARATH | Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2 | 51 | 181 | 4.0E-19 |
| sp|Q949U7|PRX2E_ARATH | Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2 | 1 | 166 | 2.0E-18 |
| sp|O43099|PMP20_ASPFU | Putative peroxiredoxin pmp20 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp20 PE=1 SV=1 | 50 | 182 | 4.0E-18 |
| sp|P14292|PMPA_CANBO | Putative peroxiredoxin-A OS=Candida boidinii GN=PMPA PE=1 SV=3 | 26 | 181 | 5.0E-18 |
| sp|P14293|PMPB_CANBO | Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3 | 62 | 181 | 9.0E-18 |
| sp|Q7F8S5|PR2E2_ORYSJ | Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1 | 23 | 166 | 1.0E-17 |
| sp|Q5ASN8|PMP20_EMENI | Putative peroxiredoxin pmp20 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN8692 PE=1 SV=1 | 54 | 182 | 2.0E-16 |
| sp|P44758|PRX5_HAEIN | Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0572 PE=1 SV=1 | 49 | 176 | 4.0E-16 |
| sp|P73728|Y1621_SYNY3 | Putative peroxiredoxin sll1621 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1621 PE=1 SV=1 | 62 | 168 | 7.0E-16 |
| sp|P38013|AHP1_YEAST | Peroxiredoxin type-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AHP1 PE=1 SV=4 | 62 | 177 | 2.0E-15 |
| sp|B3EWI1|GSPRX_MARGR | Glutathione amide-dependent peroxidase OS=Marichromatium gracile GN=garA PE=1 SV=1 | 55 | 181 | 5.0E-14 |
| sp|P56578|MALF3_MALFU | Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1 | 62 | 177 | 5.0E-14 |
| sp|Q69TY4|PR2E1_ORYSJ | Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1 | 30 | 166 | 7.0E-14 |
| sp|Q01116|PMP20_LIPKO | Putative peroxisomal peroxiredoxin OS=Lipomyces kononenkoae PE=2 SV=2 | 54 | 168 | 8.0E-14 |
| sp|P56577|MALF2_MALFU | Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1 | 53 | 160 | 2.0E-12 |
| sp|Q53212|Y4VD_RHISN | Putative peroxiredoxin y4vD OS=Rhizobium sp. (strain NGR234) GN=NGR_a01200 PE=3 SV=1 | 53 | 166 | 5.0E-11 |
| sp|O69777|YRP2_RHIET | Putative peroxiredoxin in rpoN2 3'region OS=Rhizobium etli PE=3 SV=2 | 53 | 168 | 1.0E-10 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1973 MAFRTALRRVALARPVARSFHSTPRACISVGDEVPIFDGLLEDSPGNKVNLADEFSSADGYIIGVPGAFTGTCSS KHIPSYINHPKLKQAGRVFVVSVNDPFVMKAWREQMDPAGESSIRFIADPTAGFTKALDLGFDGANIFGGIRSKR YALKIDGGKVTKAHIEPEVSSADVTMADKVLE |
| Coding | >Ophio5|1973 ATGGCTTTCCGCACAGCTCTTCGGCGTGTCGCCCTCGCCCGTCCCGTTGCCCGGAGCTTCCACTCGACGCCCCGA GCTTGCATCAGCGTTGGCGACGAAGTGCCCATCTTTGACGGGCTCTTGGAGGACTCGCCCGGCAACAAGGTTAAC CTGGCAGACGAATTCAGTTCAGCTGATGGGTATATCATCGGCGTTCCAGGCGCCTTCACGGGGACCTGCTCGAGC AAGCACATTCCTTCCTACATCAACCACCCCAAACTGAAGCAGGCTGGTCGCGTCTTTGTGGTCTCCGTCAACGAT CCTTTTGTCATGAAGGCCTGGCGCGAGCAGATGGACCCTGCGGGCGAAAGCTCAATACGCTTCATAGCCGATCCG ACAGCAGGCTTTACCAAGGCCCTTGATCTAGGCTTCGACGGCGCAAACATTTTCGGCGGCATCCGTAGCAAGCGA TATGCCTTGAAGATTGACGGCGGAAAGGTGACCAAGGCGCACATCGAGCCCGAAGTGTCTAGTGCCGACGTTACA ATGGCCGATAAGGTGTTGGAA |
| Transcript | >Ophio5|1973 ATGGCTTTCCGCACAGCTCTTCGGCGTGTCGCCCTCGCCCGTCCCGTTGCCCGGAGCTTCCACTCGACGCCCCGA GCTTGCATCAGCGTTGGCGACGAAGTGCCCATCTTTGACGGGCTCTTGGAGGACTCGCCCGGCAACAAGGTTAAC CTGGCAGACGAATTCAGTTCAGCTGATGGGTATATCATCGGCGTTCCAGGCGCCTTCACGGGGACCTGCTCGAGC AAGCACATTCCTTCCTACATCAACCACCCCAAACTGAAGCAGGCTGGTCGCGTCTTTGTGGTCTCCGTCAACGAT CCTTTTGTCATGAAGGCCTGGCGCGAGCAGATGGACCCTGCGGGCGAAAGCTCAATACGCTTCATAGCCGATCCG ACAGCAGGCTTTACCAAGGCCCTTGATCTAGGCTTCGACGGCGCAAACATTTTCGGCGGCATCCGTAGCAAGCGA TATGCCTTGAAGATTGACGGCGGAAAGGTGACCAAGGCGCACATCGAGCCCGAAGTGTCTAGTGCCGACGTTACA ATGGCCGATAAGGTGTTGGAATAA |
| Gene | >Ophio5|1973 ATGGCTTTCCGCACAGCTCTTCGGCGTGTCGCCCTCGCCCGTCCCGTTGCCCGGAGCTTCCACTCGACGCCCCGA GCTTGCATCAGCGTTGGCGACGAAGTGCCCATCTTTGACGGGCTCTTGGAGGACTCGCCCGGCAACAAGGTTAAC CTGGCAGACGAATTCAGTTCAGCTGATGGGTATATCATCGGCGTTCCAGGCGCCTTCACGGGGACCTGCTCGAGC AAGCACATTCCTTCCTACATCAACCACCCCAAACTGAAGCAGGCTGGTCGCGTCTTTGTGGTCTCCGTCAACGAT CCTTTTGTGTAAGCGACTGGACCGTGTGCACCGGACTGATGGGAGACCGAAGAGCAAGCTGGCTGACCCACGCAG CATGAAGGCCTGGCGCGAGCAGATGGACCCTGCGGGCGAAAGCTCAGTAAGTGCATCACAACGACTGTTGACACG GGCACCGAGTGTTGATAAGGTCTTCATAGATACGCTTCATAGCCGATCCGACAGCAGGCTTTACCAAGGCCCTTG ATCTAGGCTTCGACGGCGCAAACATTTTCGGCGGCATCCGTAGCAAGCGATATGCCTTGAAGATTGACGGCGGAA AGGTGACCAAGGCGCACATCGAGCCCGAAGTGTCTAGTGCCGACGGTAAGCTGGATAACTCATGGTGGCTTAATT TTGGGAATGAGGTCGCTAACATGTTCTTGTCGTGGCAGTTACAATGGCCGATAAGGTGTTGGAATAA |