Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|1952
Gene name
Location	scaffold_177:5247..5704
Strand	-
Gene length (bp)	457
Transcript length (bp)	402
Coding sequence length (bp)	399
Protein length (aa)	133

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 27	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|1952 MESGWLWIHVLYCVLSTLYSLPVALSTPFPLSLSCYHLDSRRRVGRQVREASHCQLEGGISLIHQRLRQVPAEID QHGCACLSEEELTIGRCLSLTSHHFSSPRLSLPATLFFLVETVLERCLGTHLTILSST
Coding	>Ophio5\|1952 ATGGAAAGTGGCTGGCTTTGGATACACGTCTTGTATTGCGTTCTCTCCACTCTCTATTCCCTTCCTGTTGCCCTC TCGACCCCGTTTCCCCTTTCCCTTTCCTGTTACCATCTTGATAGCCGACGACGAGTGGGTAGGCAAGTTAGGGAG GCGAGTCACTGCCAGCTTGAGGGTGGCATCTCCTTGATCCACCAACGTCTTCGGCAGGTCCCAGCCGAGATAGAC CAGCACGGTTGTGCCTGCTTGTCTGAGGAAGAGTTGACGATTGGCAGGTGTCTCTCCTTGACCTCTCATCACTTC TCGTCACCTCGACTCTCTCTTCCTGCTACCCTTTTTTTTTTGGTGGAAACGGTTTTGGAACGCTGCCTTGGAACG CATCTTACCATTCTCTCTTCCACC
Transcript	>Ophio5\|1952 ATGGAAAGTGGCTGGCTTTGGATACACGTCTTGTATTGCGTTCTCTCCACTCTCTATTCCCTTCCTGTTGCCCTC TCGACCCCGTTTCCCCTTTCCCTTTCCTGTTACCATCTTGATAGCCGACGACGAGTGGGTAGGCAAGTTAGGGAG GCGAGTCACTGCCAGCTTGAGGGTGGCATCTCCTTGATCCACCAACGTCTTCGGCAGGTCCCAGCCGAGATAGAC CAGCACGGTTGTGCCTGCTTGTCTGAGGAAGAGTTGACGATTGGCAGGTGTCTCTCCTTGACCTCTCATCACTTC TCGTCACCTCGACTCTCTCTTCCTGCTACCCTTTTTTTTTTGGTGGAAACGGTTTTGGAACGCTGCCTTGGAACG CATCTTACCATTCTCTCTTCCACCTGA
Gene	>Ophio5\|1952 ATGGAAAGTGGCTGGCTTTGGATACACGTCTTGTATTGCGTTCTCTCCACTCTCTATTCCCTTCCTGTTGCCCTC TCGACCCCGTTTCCCCTTTCCCTTTCCTGTTACCATCTTGATAGCCGACGACGAGTGGGTAGGCAAGTTAGGGAG GCGAGTCACTGCCAGCTTGAGGGTGGCATCTCCTTGATCCACCAACGTCTTCGGCAGGTCCCAGCCGAGATAGAC CAGCACGGTTGTGCCTGCTTGTCTGAGGAAGAGTTGACGATTGGCAGGTGTCTCTCCTTGACCTCTCATCACTTC TCGTCACCTCGACTCTCTCTTCCTGTTCGTCTTCCAACCTCCCATCCGCAACACCAGGCCATACTCACGAGCCAG ACAGGCTACCCTTTTTTTTTTGGTGGAAACGGTTTTGGAACGCTGCCTTGGAACGCATCTTACCATTCTCTCTTC CACCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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