Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|1948
Gene name
Locationscaffold_176:29022..30467
Strand+
Gene length (bp)1445
Transcript length (bp)1191
Coding sequence length (bp)1188
Protein length (aa) 396

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 1.0E-12 105 253

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P45797|GUB_PAEPO Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1 120 250 5.0E-07
sp|Q53317|XYND_RUMFL Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2 120 249 1.0E-06
sp|P04957|GUB_BACSU Beta-glucanase OS=Bacillus subtilis (strain 168) GN=bglS PE=1 SV=2 126 250 3.0E-06
sp|P27051|GUB_BACLI Beta-glucanase OS=Bacillus licheniformis GN=bg1 PE=1 SV=1 126 273 5.0E-06
sp|P23904|GUB_PAEMA Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2 120 250 6.0E-06

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|1948
MKSLGFLVLVSLTPRLVAALCECGFAVKGTDDGHGPWLFTNVLESDFTKGVKVSENKDWVRQQFNVSAKAGRGRY
GKSFSLDNILSHDPTVRSQGASALQLRVGSMLNKDAVTAAEMDSARNDLHWGSYRAGMKLTAVNGTCSAFFWYLN
DTQEIDMEFLSHEYDADKGVYPINLAIQSKKSMEAGYDATRTATYRRVNLTFDPTAAFHEYRFDYLPGRVAFYAD
SVKLAEMEGDEMPKTSGHLILQHWSNGDPMWSGGPPAQDALLTVSYVKAYFNSSDNKASWEERCGQSQGTAICTI
PDVTAANASTGGHFFTDGRSRKEGGEADSGCAGEGGYGLTAMAMATLAMLVNGTGRGGDGRPRKRRQPGGISPAP
RRSPADLPGTTRGRSRGSGGE
Coding >Ophio5|1948
ATGAAATCGCTTGGATTCTTAGTGCTCGTTTCTTTAACGCCTCGACTCGTCGCCGCTCTTTGCGAGTGCGGGTTC
GCCGTAAAGGGGACCGACGACGGTCATGGACCGTGGCTTTTTACAAACGTGCTCGAGAGCGACTTTACAAAAGGT
GTCAAGGTCTCGGAGAACAAAGACTGGGTTCGACAGCAGTTCAACGTCTCGGCAAAGGCTGGTCGCGGCAGATAC
GGCAAGTCGTTTAGTTTGGACAACATCTTGTCTCATGATCCAACCGTCAGGTCTCAAGGCGCATCCGCTCTGCAA
CTGCGTGTTGGCAGCATGCTCAACAAGGATGCCGTTACGGCGGCAGAAATGGATTCGGCAAGGAATGACTTGCAC
TGGGGATCGTATCGCGCCGGCATGAAGCTAACGGCCGTCAATGGCACATGCTCTGCCTTCTTCTGGTACCTCAAC
GACACGCAGGAGATTGACATGGAGTTTCTGTCGCACGAGTATGACGCCGACAAGGGCGTGTATCCCATCAACCTG
GCGATACAGTCCAAGAAGTCGATGGAAGCTGGCTACGACGCTACGAGGACGGCGACTTACAGACGTGTCAATCTC
ACCTTTGACCCGACGGCCGCCTTCCACGAGTATCGGTTCGACTACCTGCCCGGGCGCGTGGCCTTCTACGCCGAT
AGCGTTAAGCTGGCCGAAATGGAGGGCGACGAGATGCCGAAAACGTCGGGCCATCTTATCCTCCAGCATTGGAGC
AACGGGGATCCAATGTGGTCAGGCGGTCCGCCGGCGCAGGACGCCCTGCTGACGGTGAGCTACGTCAAGGCTTAC
TTCAACTCGTCGGACAACAAGGCAAGCTGGGAGGAACGTTGCGGCCAATCTCAGGGCACAGCCATATGCACCATT
CCAGATGTCACGGCTGCCAATGCGAGCACGGGAGGCCACTTCTTTACCGACGGTCGGTCACGCAAGGAAGGCGGT
GAGGCGGACAGCGGATGTGCTGGCGAGGGGGGTTACGGCTTGACGGCCATGGCCATGGCCACCCTCGCCATGCTC
GTGAATGGCACCGGGCGAGGCGGTGACGGACGACCGAGGAAACGACGCCAGCCGGGCGGCATCTCTCCGGCCCCC
CGCCGAAGCCCCGCCGATCTACCGGGGACCACGCGGGGGCGGAGCAGGGGCAGTGGCGGGGAA
Transcript >Ophio5|1948
ATGAAATCGCTTGGATTCTTAGTGCTCGTTTCTTTAACGCCTCGACTCGTCGCCGCTCTTTGCGAGTGCGGGTTC
GCCGTAAAGGGGACCGACGACGGTCATGGACCGTGGCTTTTTACAAACGTGCTCGAGAGCGACTTTACAAAAGGT
GTCAAGGTCTCGGAGAACAAAGACTGGGTTCGACAGCAGTTCAACGTCTCGGCAAAGGCTGGTCGCGGCAGATAC
GGCAAGTCGTTTAGTTTGGACAACATCTTGTCTCATGATCCAACCGTCAGGTCTCAAGGCGCATCCGCTCTGCAA
CTGCGTGTTGGCAGCATGCTCAACAAGGATGCCGTTACGGCGGCAGAAATGGATTCGGCAAGGAATGACTTGCAC
TGGGGATCGTATCGCGCCGGCATGAAGCTAACGGCCGTCAATGGCACATGCTCTGCCTTCTTCTGGTACCTCAAC
GACACGCAGGAGATTGACATGGAGTTTCTGTCGCACGAGTATGACGCCGACAAGGGCGTGTATCCCATCAACCTG
GCGATACAGTCCAAGAAGTCGATGGAAGCTGGCTACGACGCTACGAGGACGGCGACTTACAGACGTGTCAATCTC
ACCTTTGACCCGACGGCCGCCTTCCACGAGTATCGGTTCGACTACCTGCCCGGGCGCGTGGCCTTCTACGCCGAT
AGCGTTAAGCTGGCCGAAATGGAGGGCGACGAGATGCCGAAAACGTCGGGCCATCTTATCCTCCAGCATTGGAGC
AACGGGGATCCAATGTGGTCAGGCGGTCCGCCGGCGCAGGACGCCCTGCTGACGGTGAGCTACGTCAAGGCTTAC
TTCAACTCGTCGGACAACAAGGCAAGCTGGGAGGAACGTTGCGGCCAATCTCAGGGCACAGCCATATGCACCATT
CCAGATGTCACGGCTGCCAATGCGAGCACGGGAGGCCACTTCTTTACCGACGGTCGGTCACGCAAGGAAGGCGGT
GAGGCGGACAGCGGATGTGCTGGCGAGGGGGGTTACGGCTTGACGGCCATGGCCATGGCCACCCTCGCCATGCTC
GTGAATGGCACCGGGCGAGGCGGTGACGGACGACCGAGGAAACGACGCCAGCCGGGCGGCATCTCTCCGGCCCCC
CGCCGAAGCCCCGCCGATCTACCGGGGACCACGCGGGGGCGGAGCAGGGGCAGTGGCGGGGAATGA
Gene >Ophio5|1948
ATGAAATCGCTTGGATTCTTAGTGCTCGTTTCTTTAACGCCTCGACTCGTCGCCGCTCTTTGCGAGTGCGGGTTC
GCCGTAAAGGGGACCGACGACGGTCATGGACCGTGGCTTTTTACAAACGTGCTCGAGAGCGACTTTACAAAAGGT
GTCAAGGTCTCGGAGAACAAAGACTGGGTTCGACAGCAGTTCAACGTCTCGGCAAAGGCTGGTCGCGGCAGATAC
GGCAAGTCGTTTAGTTTGGACAACATCTTGTCTCATGATCCAACCGTCAGGTCTCAAGGCGCATCCGCTCTGCAA
CTGCGTGTTGGCAGCATGCTCAACAAGGATGCCGTTACGGCGGCAGAAATGGATTCGGCAAGGAATGACTTGCAC
TGGGGATCGTATCGCGCCGGCATGAAGCTAACGGCCGTCAATGGCACATGCTCTGCCTTCTTCTGGGTGCGTGTG
CATCTCGTGGCCTCGGCACCGTGAAATCTAAACTCGTGGCGCTCCTAGTACCTCAACGACACGCAGGAGATTGAC
ATGGAGTTTCTGTCGCACGAGTATGACGCCGACAAGGGCGTGTATCCCATCAACCTGGCGATACAGTCCAAGAAG
TCGATGGAAGCTGGCTACGACGCTACGAGGACGGCGACTTACAGACGTGTCAATCTCACCTTTGACCCGACGGCC
GCCTTCCACGAGTATCGGTTCGACTACCTGCCCGGGCGCGTGGCCTTCTACGCCGATAGCGTTAAGCTGGCCGAA
ATGGAGGGCGACGAGATGCCGAAAACGTCGGGCCATCTTATCCTCCAGCATTGGAGCAACGGGGATCCAATGTGG
TCAGGCGGTCCGCCGGCGCAGGACGCCCTGCTGACGGTGAGCTACGTCAAGGCTTACTTCAACTCGTCGGACAAC
AAGGCAAGCTGGGAGGAACGTTGCGGCCAATCTCAGGGCACAGCCATATGCACCATTCCAGATGTCACGGCTGCC
AATGCGAGCACGGGAGGCCACTTCTTTACCGACGGTCGGTCACGCAAGGAAGGCGGTGAGGCGGACAGCGGATGT
GCTGGCGAGGGGGGTTACGGCTTGACGGCCATGGCCATGGCCACCCTCGCCATGCTCGTGAATGGCACCGGGCGA
GGCGGTTTGTGAGGGATGATGGAGTGAGAGAGGGTGCTCATGACAGCGGAAGGCGCCCAAGTTGATACCAATAAT
GTTTAAGCATTTCCGCCACCTCGCGGCGACCTGTCTTAACCGGATTGTGGCGCTTTCAGGTGACGGACGACCGAG
GAAACGGTAAGTCTGATGACGCGCATGCTTCATCCTCTTGCGTCTTGAGACTGATAAAGTGGCCCCGTGCGAGAC
GCCAGCCGGGCGGCATCTCTCCGGCCCCCCGCCGAAGCCCCGCCGATCTACCGGGGACCACGCGGGGGCGGAGCA
GGGGCAGTGGCGGGGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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