© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|1938 |
| Gene name | |
| Location | scaffold_176:5208..7157 |
| Strand | - |
| Gene length (bp) | 1949 |
| Transcript length (bp) | 1767 |
| Coding sequence length (bp) | 1764 |
| Protein length (aa) | 588 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00735 | Septin | Septin | 2.9E-10 | 294 | 369 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9QZR6|SEPT9_RAT | Septin-9 OS=Rattus norvegicus GN=Sept9 PE=1 SV=1 | 171 | 366 | 2.0E-10 |
| sp|Q80UG5|SEPT9_MOUSE | Septin-9 OS=Mus musculus GN=Sept9 PE=1 SV=1 | 171 | 357 | 5.0E-09 |
| sp|Q9UHD8|SEPT9_HUMAN | Septin-9 OS=Homo sapiens GN=SEPT9 PE=1 SV=2 | 171 | 357 | 1.0E-08 |
| sp|P39827|CDC10_CANAL | Cell division control protein 10 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CDC10 PE=2 SV=1 | 171 | 371 | 2.0E-08 |
| sp|Q5BKN4|SEP2A_XENTR | Septin-2A OS=Xenopus tropicalis GN=sept2-A PE=2 SV=1 | 173 | 369 | 7.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9QZR6|SEPT9_RAT | Septin-9 OS=Rattus norvegicus GN=Sept9 PE=1 SV=1 | 171 | 366 | 2.0E-10 |
| sp|Q80UG5|SEPT9_MOUSE | Septin-9 OS=Mus musculus GN=Sept9 PE=1 SV=1 | 171 | 357 | 5.0E-09 |
| sp|Q9UHD8|SEPT9_HUMAN | Septin-9 OS=Homo sapiens GN=SEPT9 PE=1 SV=2 | 171 | 357 | 1.0E-08 |
| sp|P39827|CDC10_CANAL | Cell division control protein 10 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CDC10 PE=2 SV=1 | 171 | 371 | 2.0E-08 |
| sp|Q5BKN4|SEP2A_XENTR | Septin-2A OS=Xenopus tropicalis GN=sept2-A PE=2 SV=1 | 173 | 369 | 7.0E-07 |
| sp|Q5ZMH1|SEPT2_CHICK | Septin-2 OS=Gallus gallus GN=SEPT2 PE=2 SV=1 | 173 | 369 | 1.0E-06 |
| sp|Q5RA66|SEPT2_PONAB | Septin-2 OS=Pongo abelii GN=SEPT2 PE=2 SV=1 | 173 | 369 | 2.0E-06 |
| sp|Q15019|SEPT2_HUMAN | Septin-2 OS=Homo sapiens GN=SEPT2 PE=1 SV=1 | 173 | 369 | 3.0E-06 |
| sp|Q2NKY7|SEPT2_BOVIN | Septin-2 OS=Bos taurus GN=SEPT2 PE=2 SV=1 | 173 | 369 | 3.0E-06 |
| sp|P42209|SEPT1_MOUSE | Septin-1 OS=Mus musculus GN=Sept1 PE=1 SV=2 | 173 | 369 | 3.0E-06 |
| sp|Q91Y81|SEPT2_RAT | Septin-2 OS=Rattus norvegicus GN=Sept2 PE=1 SV=1 | 173 | 369 | 3.0E-06 |
| sp|P39826|CDC3_CANAX | Cell division control protein 3 OS=Candida albicans GN=CDC3 PE=3 SV=1 | 294 | 370 | 6.0E-06 |
| sp|P42208|SEPT2_MOUSE | Septin-2 OS=Mus musculus GN=Sept2 PE=1 SV=2 | 173 | 369 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005525 | GTP binding | Yes |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032561 | guanyl ribonucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0019001 | guanyl nucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0005488 | binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 64.43 | 34.99 | 93.87 |
| CcL | In ants, during behavior modification | 58.06 | 31.51 | 84.60 |
| CcD | In ants, recently dead | 65.59 | 35.61 | 95.57 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.690995 | no |
| SC16a | CcD | 0.952874 | no |
| CcL | CcD | 0.645774 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|1938 MRPVSISADSETARPDALPSHAPVAPLSCFITTEANLDSAAACPDVDCPPKHRSHQSPCGHSCSFSDHSVHRRRT ISQASSDMAFEISPAPVSAGVVGSRSVASGLSSLGISPVSSSSGEPSGDSAKPAGLASGDLNATMAEGSFHQLVM PSLMVPRRRSFTDVGKSLGYLKLLVSGPAGIGKTSLIRSLGQNCQHIVYLDPISSFSTERVTEIFASTRSYPWWR AETRTIRRTKFVADELLERNICFADCPPFKSDTGQVTGYVESQLMQLCQKPIGDVDLFHLLSGGAGSIVHAVLYM LPNTGPRPEDIKHIKMLQEMTNVIPLLARADELTDEQAVFSKRRLLSLLARENLDLFSFTGTDSAQQESSIYAVS CTAQSDCTASEQEMHMSFEHIHPQAPTDLADLVDHIFSQDGSSWLRHSAAVKSVHWRRRQLEMASRSALTLRNIT YSGTMTSPCLPFSEAPHRERIVFSSWAESLRQSLTAERICRSCSNLPSEVQRIELAMTQTGKSLNVARVQKSVER TSKVHQDPLGLLKLASQINHGGRLSLELLTSLGGFGVAAWLVRPELARQCGMGLSTSWGLATS |
| Coding | >Ophio5|1938 ATGAGGCCAGTCTCCATCTCGGCTGACTCGGAAACCGCCCGCCCCGACGCCTTGCCGTCTCATGCGCCGGTTGCG CCCCTAAGCTGCTTCATTACTACCGAGGCCAACCTCGACTCAGCCGCTGCCTGTCCCGATGTCGACTGTCCTCCA AAGCACCGCTCTCATCAGTCACCATGCGGTCACAGCTGTTCCTTCTCCGACCATTCCGTACACCGCCGGCGAACA ATCTCCCAGGCCTCCTCCGACATGGCGTTCGAAATTTCCCCGGCGCCCGTCTCGGCCGGCGTTGTCGGCTCCCGA TCAGTCGCAAGTGGTCTATCGTCCCTCGGAATCTCTCCGGTCAGCTCTTCCTCTGGCGAGCCCAGCGGAGACTCT GCCAAACCCGCCGGACTCGCTTCCGGTGACCTTAATGCCACCATGGCCGAAGGCTCCTTTCACCAACTGGTAATG CCGAGCCTAATGGTTCCTCGACGTCGCTCTTTCACGGACGTTGGCAAGTCTTTGGGATACCTCAAACTGCTCGTC TCAGGTCCAGCCGGCATTGGCAAGACATCGCTCATTCGCTCCCTTGGTCAAAACTGTCAGCATATCGTGTACCTT GATCCCATATCTTCCTTCTCTACCGAGAGAGTCACGGAAATCTTTGCCAGCACCAGATCATATCCCTGGTGGAGA GCAGAGACTCGAACAATCAGGCGGACAAAGTTTGTGGCCGATGAGCTTCTAGAAAGAAATATTTGCTTCGCAGAT TGTCCACCATTTAAAAGTGATACTGGGCAGGTGACTGGGTACGTCGAGTCGCAGCTAATGCAACTCTGCCAGAAG CCCATCGGGGATGTCGACCTTTTTCATCTGCTAAGTGGCGGAGCTGGGTCCATCGTCCATGCTGTTCTGTACATG CTACCCAACACCGGCCCACGCCCGGAAGACATAAAACACATCAAGATGCTGCAAGAGATGACAAATGTGATCCCA TTACTTGCGAGAGCAGATGAGCTTACAGACGAGCAAGCGGTGTTCTCAAAGAGGAGACTCCTCAGCCTTCTGGCA AGAGAGAATCTAGACCTGTTTTCCTTTACCGGTACCGACTCAGCGCAGCAGGAATCGAGTATATATGCAGTCTCT TGTACTGCCCAATCTGACTGCACTGCATCGGAGCAAGAAATGCACATGAGTTTCGAGCACATCCACCCGCAAGCA CCTACAGACCTTGCCGACCTCGTCGACCACATTTTCTCACAAGACGGAAGCTCCTGGCTTCGGCATTCTGCCGCC GTCAAGTCTGTGCATTGGCGGCGGCGACAGCTCGAGATGGCATCACGCTCCGCTTTAACACTCCGCAATATCACA TATAGTGGTACCATGACGTCTCCTTGTCTTCCATTCTCTGAAGCACCGCACCGGGAGCGAATAGTCTTCTCCAGC TGGGCAGAGAGCTTACGTCAGAGCCTCACTGCGGAAAGAATCTGCAGATCGTGTTCAAACCTACCATCGGAGGTG CAGAGAATCGAGCTGGCCATGACCCAGACTGGGAAGTCATTGAACGTGGCCCGCGTTCAAAAAAGCGTGGAGCGA ACAAGCAAAGTCCATCAAGATCCGCTGGGGCTCTTGAAGCTGGCCAGTCAGATCAATCACGGCGGGAGGCTTTCC CTCGAACTTCTGACCAGCCTTGGGGGGTTTGGCGTTGCTGCGTGGCTTGTGCGGCCCGAGCTGGCTCGCCAATGT GGTATGGGCTTGTCGACGTCCTGGGGTCTGGCAACGTCT |
| Transcript | >Ophio5|1938 ATGAGGCCAGTCTCCATCTCGGCTGACTCGGAAACCGCCCGCCCCGACGCCTTGCCGTCTCATGCGCCGGTTGCG CCCCTAAGCTGCTTCATTACTACCGAGGCCAACCTCGACTCAGCCGCTGCCTGTCCCGATGTCGACTGTCCTCCA AAGCACCGCTCTCATCAGTCACCATGCGGTCACAGCTGTTCCTTCTCCGACCATTCCGTACACCGCCGGCGAACA ATCTCCCAGGCCTCCTCCGACATGGCGTTCGAAATTTCCCCGGCGCCCGTCTCGGCCGGCGTTGTCGGCTCCCGA TCAGTCGCAAGTGGTCTATCGTCCCTCGGAATCTCTCCGGTCAGCTCTTCCTCTGGCGAGCCCAGCGGAGACTCT GCCAAACCCGCCGGACTCGCTTCCGGTGACCTTAATGCCACCATGGCCGAAGGCTCCTTTCACCAACTGGTAATG CCGAGCCTAATGGTTCCTCGACGTCGCTCTTTCACGGACGTTGGCAAGTCTTTGGGATACCTCAAACTGCTCGTC TCAGGTCCAGCCGGCATTGGCAAGACATCGCTCATTCGCTCCCTTGGTCAAAACTGTCAGCATATCGTGTACCTT GATCCCATATCTTCCTTCTCTACCGAGAGAGTCACGGAAATCTTTGCCAGCACCAGATCATATCCCTGGTGGAGA GCAGAGACTCGAACAATCAGGCGGACAAAGTTTGTGGCCGATGAGCTTCTAGAAAGAAATATTTGCTTCGCAGAT TGTCCACCATTTAAAAGTGATACTGGGCAGGTGACTGGGTACGTCGAGTCGCAGCTAATGCAACTCTGCCAGAAG CCCATCGGGGATGTCGACCTTTTTCATCTGCTAAGTGGCGGAGCTGGGTCCATCGTCCATGCTGTTCTGTACATG CTACCCAACACCGGCCCACGCCCGGAAGACATAAAACACATCAAGATGCTGCAAGAGATGACAAATGTGATCCCA TTACTTGCGAGAGCAGATGAGCTTACAGACGAGCAAGCGGTGTTCTCAAAGAGGAGACTCCTCAGCCTTCTGGCA AGAGAGAATCTAGACCTGTTTTCCTTTACCGGTACCGACTCAGCGCAGCAGGAATCGAGTATATATGCAGTCTCT TGTACTGCCCAATCTGACTGCACTGCATCGGAGCAAGAAATGCACATGAGTTTCGAGCACATCCACCCGCAAGCA CCTACAGACCTTGCCGACCTCGTCGACCACATTTTCTCACAAGACGGAAGCTCCTGGCTTCGGCATTCTGCCGCC GTCAAGTCTGTGCATTGGCGGCGGCGACAGCTCGAGATGGCATCACGCTCCGCTTTAACACTCCGCAATATCACA TATAGTGGTACCATGACGTCTCCTTGTCTTCCATTCTCTGAAGCACCGCACCGGGAGCGAATAGTCTTCTCCAGC TGGGCAGAGAGCTTACGTCAGAGCCTCACTGCGGAAAGAATCTGCAGATCGTGTTCAAACCTACCATCGGAGGTG CAGAGAATCGAGCTGGCCATGACCCAGACTGGGAAGTCATTGAACGTGGCCCGCGTTCAAAAAAGCGTGGAGCGA ACAAGCAAAGTCCATCAAGATCCGCTGGGGCTCTTGAAGCTGGCCAGTCAGATCAATCACGGCGGGAGGCTTTCC CTCGAACTTCTGACCAGCCTTGGGGGGTTTGGCGTTGCTGCGTGGCTTGTGCGGCCCGAGCTGGCTCGCCAATGT GGTATGGGCTTGTCGACGTCCTGGGGTCTGGCAACGTCTTGA |
| Gene | >Ophio5|1938 ATGAGGCCAGTCTCCATCTCGGCTGACTCGGAAACCGCCCGCCCCGACGCCTTGCCGTCTCATGCGCCGGTTGCG CCCCTAAGCTGCTTCATTACTACCGAGGCCAACCTCGACTCAGCCGCTGCCTGTCCCGATGTCGACTGTCCTCCA AAGCACCGCTCTCATCAGTCACCATGCGGTCACAGCTGTTCCTTCTCCGACCATTCCGTACACCGCCGGCGAACA ATCTCCCAGGCCTCCTCCGACATGGCGTTCGAAATTTCCCCGGCGCCCGTCTCGGCCGGCGTTGTCGGCTCCCGA TCAGTCGCAAGTGGTCTATCGTCCCTCGGAATCTCTCCGGTCAGCTCTTCCTCTGGCGAGCCCAGCGGAGACTCT GCCAAACCCGCCGGACTCGCTTCCGGTGACCTTAATGCCACCATGGCCGAAGGCTCCTTTCACCAACTGGTAATG CCGAGCCTAATGGTTCCTCGACGTCGCTCTTTCACGGACGTTGGCAAGTCTTTGGGATACCTCAAACTGCTCGTC TCAGGTCCAGCCGGTATCGTGGAGTCACCTCCTCTCCATTGCCGTGGGCACTTCTGCTGATTCGTCCAAAGGCAT TGGCAAGACATCGCTCATTCGCTCCCTTGGTCAAAACTGTCAGCATATCGTGTACCTTGATCCCATATCTTCCTT CTCTACCGAGAGAGTCACGGAAATCTTTGCCAGCACCAGATCATATCCCTGGTGGAGAGCAGAGACTCGAACAAT CAGGCGGACAAAGTTTGTGGCCGATGAGCTTCTAGAAAGAAATATTTGCTTCGCAGATTGTCCACCATTTAAAAG TGATACTGGGGTATTTTATTCCTCGAAGAAAGCTCGTTGACCATCCAGCTAACATGCTTTGGTCATAAAGCAGGT GACTGGGTACGTCGAGTCGCAGCTAATGCAACTCTGCCAGAAGCCCATCGGGGATGTCGACCTTTTTCATCTGCT AAGTGGCGGAGCTGGGTCCATCGTCCATGCTGTTCTGTACATGCTACCCAACACCGGTAAGTGTAGCACGCCGAC GTAGGTAGACACCTTTGAGTCTCAGCAGGGCTGACACAGGTTCAGGCCCACGCCCGGAAGACATAAAACACATCA AGATGCTGCAAGAGATGACAAATGTGATCCCATTACTTGCGAGAGCAGATGAGCTTACAGACGAGCAAGCGGTGT TCTCAAAGAGGAGACTCCTCAGCCTTCTGGCAAGAGAGAATCTAGACCTGTTTTCCTTTACCGGTACCGACTCAG CGCAGCAGGAATCGAGTATATATGCAGTCTCTTGTACTGCCCAATCTGACTGCACTGCATCGGAGCAAGAAATGC ACATGAGTTTCGAGCACATCCACCCGCAAGCACCTACAGACCTTGCCGACCTCGTCGACCACATTTTCTCACAAG ACGGAAGCTCCTGGCTTCGGCATTCTGCCGCCGTCAAGTCTGTGCATTGGCGGCGGCGACAGCTCGAGATGGCAT CACGCTCCGCTTTAACACTCCGCAATATCACATATAGTGGTACCATGACGTCTCCTTGTCTTCCATTCTCTGAAG CACCGCACCGGGAGCGAATAGTCTTCTCCAGCTGGGCAGAGAGCTTACGTCAGAGCCTCACTGCGGAAAGAATCT GCAGATCGTGTTCAAACCTACCATCGGAGGTGCAGAGAATCGAGCTGGCCATGACCCAGACTGGGAAGTCATTGA ACGTGGCCCGCGTTCAAAAAAGCGTGGAGCGAACAAGCAAAGTCCATCAAGATCCGCTGGGGCTCTTGAAGCTGG CCAGTCAGATCAATCACGGCGGGAGGCTTTCCCTCGAACTTCTGACCAGCCTTGGGGGGTTTGGCGTTGCTGCGT GGCTTGTGCGGCCCGAGCTGGCTCGCCAATGTGGTATGGGCTTGTCGACGTCCTGGGGTCTGGCAACGTCTTGA |